RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 AEBP2Q6ZN18 517 aaPredicted RBP31.49■■■□□ 2.63
TTR-203ENST00000541025 CHIC1Q5VXU3 224 aa30.34■■■□□ 2.45
TTR-203ENST00000541025 SENP3Q9H4L4 574 aaPredicted RBP26.89■■□□□ 1.9
TTR-203ENST00000541025 PHF23Q9BUL5 403 aaPredicted RBP26.59■■□□□ 1.85
TTR-203ENST00000541025 FOXD1Q16676 465 aa24.97■■□□□ 1.59
TTR-203ENST00000541025 PLPPR3Q6T4P5 718 aa24.45■■□□□ 1.5
TTR-203ENST00000541025 PPP6R1Q9UPN7 881 aa23.62■■□□□ 1.37
TTR-203ENST00000541025 ADRA2BP18089 450 aa23.56■■□□□ 1.36
TTR-203ENST00000541025 PIAS4Q8N2W9 510 aaPredicted RBP23.41■■□□□ 1.34
TTR-203ENST00000541025 MSH5O43196 834 aa23.28■■□□□ 1.32
TTR-203ENST00000541025 POTEDQ86YR6 584 aa22.02■■□□□ 1.12
TTR-203ENST00000541025 SCAF1Q9H7N4 1312 aaKnown RBP21.69■■□□□ 1.06
TTR-203ENST00000541025 MAPK8IP2Q13387 824 aaPredicted RBP21.53■■□□□ 1.04
TTR-203ENST00000541025 PPP4R3CPQ6ZMV5 832 aa21.45■■□□□ 1.02
TTR-203ENST00000541025 DMRT2Q9Y5R5 561 aa21.37■■□□□ 1.01
TTR-203ENST00000541025 CNKSR2Q8WXI2 1034 aa20.99■□□□□ 0.95
TTR-203ENST00000541025 NCBP3Q53F19 620 aaKnown RBP20.8■□□□□ 0.92
TTR-203ENST00000541025 HOXD11P31277 338 aaPredicted RBP20.75■□□□□ 0.91
TTR-203ENST00000541025 RNF216Q9NWF9 866 aaPredicted RBP20.71■□□□□ 0.91
TTR-203ENST00000541025 DCAF8L1A6NGE4 600 aa20.43■□□□□ 0.86
TTR-203ENST00000541025 NPM3O75607 178 aaKnown RBP20.41■□□□□ 0.86
TTR-203ENST00000541025 KCNA4P22459 653 aa20.33■□□□□ 0.85
TTR-203ENST00000541025 DNAJC5BQ9UF47 199 aa20.04■□□□□ 0.8
TTR-203ENST00000541025 RNF39Q9H2S5 420 aa19.87■□□□□ 0.77
TTR-203ENST00000541025 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.76■□□□□ 0.75
TTR-203ENST00000541025 CACNB1Q02641 598 aaPredicted RBP19.72■□□□□ 0.75
TTR-203ENST00000541025 C1QBPQ07021 282 aaKnown RBP19.65■□□□□ 0.74
TTR-203ENST00000541025 SLC4A2P04920 1241 aa19.39■□□□□ 0.69
TTR-203ENST00000541025 U3KPZ7 1027 aaPredicted RBP19.35■□□□□ 0.69
TTR-203ENST00000541025 SLC4A1APQ9BWU0 796 aaKnown RBP19.3■□□□□ 0.68
TTR-203ENST00000541025 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.04■□□□□ 0.64
TTR-203ENST00000541025 HNRNPUL2Q1KMD3 747 aaKnown RBP19.04■□□□□ 0.64
TTR-203ENST00000541025 APLP2Q06481 763 aa18.97■□□□□ 0.63
TTR-203ENST00000541025 SPINK5Q9NQ38 1064 aaPredicted RBP18.93■□□□□ 0.62
TTR-203ENST00000541025 CAPN15O75808 1086 aa18.92■□□□□ 0.62
TTR-203ENST00000541025 SAMD1Q6SPF0 538 aaPredicted RBP18.91■□□□□ 0.62
TTR-203ENST00000541025 MYCNP04198 464 aaPredicted RBP18.9■□□□□ 0.62
TTR-203ENST00000541025 FOXD4L1Q9NU39 408 aa18.9■□□□□ 0.62
TTR-203ENST00000541025 DSG3P32926 999 aa18.73■□□□□ 0.59
TTR-203ENST00000541025 ZNF219Q9P2Y4 722 aaPredicted RBP18.73■□□□□ 0.59
TTR-203ENST00000541025 TRHP20396 242 aaPredicted RBP18.7■□□□□ 0.58
TTR-203ENST00000541025 ZBTB22O15209 634 aa18.65■□□□□ 0.58
TTR-203ENST00000541025 ABCB7O75027 752 aa18.46■□□□□ 0.55
TTR-203ENST00000541025 ATF5Q9Y2D1 282 aaPredicted RBP18.36■□□□□ 0.53
TTR-203ENST00000541025 ATXN8OSP0DMR3 200 aa18.35■□□□□ 0.53
TTR-203ENST00000541025 POLA2Q14181 598 aa18.31■□□□□ 0.52
TTR-203ENST00000541025 CSRNP3Q8WYN3 585 aa18.2■□□□□ 0.5
TTR-203ENST00000541025 EHMT2Q96KQ7 1210 aa18.1■□□□□ 0.49
TTR-203ENST00000541025 ZBTB12Q9Y330 459 aaPredicted RBP18.02■□□□□ 0.48
TTR-203ENST00000541025 RBM42Q9BTD8 480 aaKnown RBP17.92■□□□□ 0.46
TTR-203ENST00000541025 FBLN2P98095 1184 aa17.72■□□□□ 0.43
TTR-203ENST00000541025 OSCARQ8IYS5 282 aa17.64■□□□□ 0.41
TTR-203ENST00000541025 AKT1S1Q96B36 256 aa17.58■□□□□ 0.4
TTR-203ENST00000541025 MKRN4PQ13434 485 aaPredicted RBP17.55■□□□□ 0.4
TTR-203ENST00000541025 SPDYE2BA6NHP3 402 aa17.48■□□□□ 0.39
TTR-203ENST00000541025 SPDYE6P0CI01 402 aa17.48■□□□□ 0.39
TTR-203ENST00000541025 SPDYE2Q495Y8 402 aa17.48■□□□□ 0.39
TTR-203ENST00000541025 REM2Q8IYK8 340 aaPredicted RBP17.38■□□□□ 0.37
TTR-203ENST00000541025 POTEHQ6S545 545 aa17.34■□□□□ 0.37
TTR-203ENST00000541025 CHRDL2Q6WN34 429 aa17.32■□□□□ 0.36
TTR-203ENST00000541025 ZNF692Q9BU19 519 aaPredicted RBP17.32■□□□□ 0.36
TTR-203ENST00000541025 SSUH2Q9Y2M2 353 aa17.25■□□□□ 0.35
TTR-203ENST00000541025 PITPNM1O00562 1244 aa17.14■□□□□ 0.33
TTR-203ENST00000541025 SPDYE1Q8NFV5 336 aaPredicted RBP17.08■□□□□ 0.32
TTR-203ENST00000541025 PABPN1Q86U42 306 aaKnown RBP eCLIP17.04■□□□□ 0.32
TTR-203ENST00000541025 FXR2P51116 673 aaKnown RBP eCLIP16.98■□□□□ 0.31
TTR-203ENST00000541025 CLEC11AQ9Y240 323 aa16.98■□□□□ 0.31
TTR-203ENST00000541025 PIP4P2Q8N4L2 257 aa16.97■□□□□ 0.31
TTR-203ENST00000541025 SPDYE4A6NLX3 237 aa16.96■□□□□ 0.31
TTR-203ENST00000541025 PRR29P0C7W0 189 aa16.8■□□□□ 0.28
TTR-203ENST00000541025 STAG3Q9UJ98 1225 aa16.75■□□□□ 0.27
TTR-203ENST00000541025 PRKAR2AP13861 404 aaKnown RBP16.73■□□□□ 0.27
TTR-203ENST00000541025 PROM2Q8N271 834 aa16.62■□□□□ 0.25
TTR-203ENST00000541025 HAX1O00165 279 aa16.6■□□□□ 0.25
TTR-203ENST00000541025 CHADLQ6NUI6 762 aa16.59■□□□□ 0.25
TTR-203ENST00000541025 FKBP8Q14318 412 aa16.47■□□□□ 0.23
TTR-203ENST00000541025 SP7Q8TDD2 431 aaPredicted RBP16.44■□□□□ 0.22
TTR-203ENST00000541025 FARP1Q9Y4F1 1045 aaPredicted RBP16.44■□□□□ 0.22
TTR-203ENST00000541025 CREBZFQ9NS37 354 aa16.43■□□□□ 0.22
TTR-203ENST00000541025 C19orf67A6NJJ6 358 aa16.41■□□□□ 0.22
TTR-203ENST00000541025 EVX2Q03828 476 aa16.36■□□□□ 0.21
TTR-203ENST00000541025 NPM1P06748 294 aaKnown RBP eCLIP16.22■□□□□ 0.19
TTR-203ENST00000541025 CD44P16070 742 aaKnown RBP16.22■□□□□ 0.19
TTR-203ENST00000541025 MNX1P50219 401 aaPredicted RBP16.19■□□□□ 0.18
TTR-203ENST00000541025 MIER1Q8N108 512 aa16.17■□□□□ 0.18
TTR-203ENST00000541025 PLEKHG5O94827 1062 aa16.16■□□□□ 0.18
TTR-203ENST00000541025 FBXO3Q9UK99 471 aa16.13■□□□□ 0.17
TTR-203ENST00000541025 CLCN6P51797 869 aa16.08■□□□□ 0.16
TTR-203ENST00000541025 PLCD3Q8N3E9 789 aa16.08■□□□□ 0.16
TTR-203ENST00000541025 GABBR2O75899 941 aa16.07■□□□□ 0.16
TTR-203ENST00000541025 ZRANB1Q9UGI0 708 aa16.06■□□□□ 0.16
TTR-203ENST00000541025 PAK3O75914 559 aaPredicted RBP16.05■□□□□ 0.16
TTR-203ENST00000541025 ZNF579Q8NAF0 562 aaKnown RBP16■□□□□ 0.15
TTR-203ENST00000541025 ZBTB47Q9UFB7 747 aaPredicted RBP15.99■□□□□ 0.15
TTR-203ENST00000541025 TSPYL2Q9H2G4 693 aaPredicted RBP15.85■□□□□ 0.13
TTR-203ENST00000541025 VASPP50552 380 aaPredicted RBP15.83■□□□□ 0.12
TTR-203ENST00000541025 PHF12Q96QT6 1004 aa15.82■□□□□ 0.12
TTR-203ENST00000541025 RASEFQ8IZ41 740 aa15.8■□□□□ 0.12
TTR-203ENST00000541025 NUBP1P53384 320 aa15.78■□□□□ 0.12
TTR-203ENST00000541025 CCDC61Q9Y6R9 512 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms