RNA–Protein interactions for RNA: ENST00000540802.1

SOX9-AS1-214, SOX9 antisense RNA 1, humanhuman

TSL 4 BASIC

Gene SOX9-AS1, Length 578 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-214ENST00000540802 AEBP2Q6ZN18 517 aaPredicted RBP26.38■■□□□ 1.81
SOX9-AS1-214ENST00000540802 CHIC1Q5VXU3 224 aa25.43■■□□□ 1.66
SOX9-AS1-214ENST00000540802 SENP3Q9H4L4 574 aaPredicted RBP22.42■■□□□ 1.18
SOX9-AS1-214ENST00000540802 PHF23Q9BUL5 403 aaPredicted RBP22.35■■□□□ 1.17
SOX9-AS1-214ENST00000540802 FOXD1Q16676 465 aa20.86■□□□□ 0.93
SOX9-AS1-214ENST00000540802 PLPPR3Q6T4P5 718 aa20.49■□□□□ 0.87
SOX9-AS1-214ENST00000540802 PPP6R1Q9UPN7 881 aa19.82■□□□□ 0.76
SOX9-AS1-214ENST00000540802 ADRA2BP18089 450 aa19.75■□□□□ 0.75
SOX9-AS1-214ENST00000540802 PIAS4Q8N2W9 510 aaPredicted RBP19.54■□□□□ 0.72
SOX9-AS1-214ENST00000540802 MSH5O43196 834 aa19.36■□□□□ 0.69
SOX9-AS1-214ENST00000540802 POTEDQ86YR6 584 aa18.23■□□□□ 0.51
SOX9-AS1-214ENST00000540802 SCAF1Q9H7N4 1312 aaKnown RBP18.08■□□□□ 0.49
SOX9-AS1-214ENST00000540802 MAPK8IP2Q13387 824 aaPredicted RBP18.04■□□□□ 0.48
SOX9-AS1-214ENST00000540802 PPP4R3CPQ6ZMV5 832 aa18.01■□□□□ 0.47
SOX9-AS1-214ENST00000540802 DMRT2Q9Y5R5 561 aa17.86■□□□□ 0.45
SOX9-AS1-214ENST00000540802 CNKSR2Q8WXI2 1034 aa17.59■□□□□ 0.41
SOX9-AS1-214ENST00000540802 NCBP3Q53F19 620 aaKnown RBP17.42■□□□□ 0.38
SOX9-AS1-214ENST00000540802 HOXD11P31277 338 aaPredicted RBP17.38■□□□□ 0.37
SOX9-AS1-214ENST00000540802 RNF216Q9NWF9 866 aaPredicted RBP17.34■□□□□ 0.37
SOX9-AS1-214ENST00000540802 KCNA4P22459 653 aa17.19■□□□□ 0.34
SOX9-AS1-214ENST00000540802 NPM3O75607 178 aaKnown RBP17.18■□□□□ 0.34
SOX9-AS1-214ENST00000540802 DCAF8L1A6NGE4 600 aa17.01■□□□□ 0.31
SOX9-AS1-214ENST00000540802 DNAJC5BQ9UF47 199 aa16.83■□□□□ 0.28
SOX9-AS1-214ENST00000540802 RNF39Q9H2S5 420 aa16.58■□□□□ 0.24
SOX9-AS1-214ENST00000540802 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.49■□□□□ 0.23
SOX9-AS1-214ENST00000540802 C1QBPQ07021 282 aaKnown RBP16.36■□□□□ 0.21
SOX9-AS1-214ENST00000540802 CACNB1Q02641 598 aaPredicted RBP16.34■□□□□ 0.21
SOX9-AS1-214ENST00000540802 SLC4A2P04920 1241 aa16.33■□□□□ 0.2
SOX9-AS1-214ENST00000540802 SLC4A1APQ9BWU0 796 aaKnown RBP16.29■□□□□ 0.2
SOX9-AS1-214ENST00000540802 U3KPZ7 1027 aaPredicted RBP16.23■□□□□ 0.19
SOX9-AS1-214ENST00000540802 FOXD4L1Q9NU39 408 aa15.92■□□□□ 0.14
SOX9-AS1-214ENST00000540802 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.89■□□□□ 0.13
SOX9-AS1-214ENST00000540802 HNRNPUL2Q1KMD3 747 aaKnown RBP15.89■□□□□ 0.13
SOX9-AS1-214ENST00000540802 MYCNP04198 464 aaPredicted RBP15.87■□□□□ 0.13
SOX9-AS1-214ENST00000540802 SPINK5Q9NQ38 1064 aaPredicted RBP15.86■□□□□ 0.13
SOX9-AS1-214ENST00000540802 ZBTB22O15209 634 aa15.83■□□□□ 0.12
SOX9-AS1-214ENST00000540802 SAMD1Q6SPF0 538 aaPredicted RBP15.82■□□□□ 0.12
SOX9-AS1-214ENST00000540802 APLP2Q06481 763 aa15.79■□□□□ 0.12
SOX9-AS1-214ENST00000540802 CAPN15O75808 1086 aa15.78■□□□□ 0.12
SOX9-AS1-214ENST00000540802 DSG3P32926 999 aa15.64■□□□□ 0.09
SOX9-AS1-214ENST00000540802 ZNF219Q9P2Y4 722 aaPredicted RBP15.63■□□□□ 0.09
SOX9-AS1-214ENST00000540802 TRHP20396 242 aaPredicted RBP15.62■□□□□ 0.09
SOX9-AS1-214ENST00000540802 ATF5Q9Y2D1 282 aaPredicted RBP15.49■□□□□ 0.07
SOX9-AS1-214ENST00000540802 CSRNP3Q8WYN3 585 aa15.46■□□□□ 0.07
SOX9-AS1-214ENST00000540802 ABCB7O75027 752 aa15.44■□□□□ 0.06
SOX9-AS1-214ENST00000540802 ATXN8OSP0DMR3 200 aa15.43■□□□□ 0.06
SOX9-AS1-214ENST00000540802 EHMT2Q96KQ7 1210 aa15.39■□□□□ 0.05
SOX9-AS1-214ENST00000540802 POLA2Q14181 598 aa15.33■□□□□ 0.04
SOX9-AS1-214ENST00000540802 ZBTB12Q9Y330 459 aaPredicted RBP15.04■□□□□ -0
SOX9-AS1-214ENST00000540802 RBM42Q9BTD8 480 aaKnown RBP14.9□□□□□ -0.02
SOX9-AS1-214ENST00000540802 FBLN2P98095 1184 aa14.82□□□□□ -0.04
SOX9-AS1-214ENST00000540802 MKRN4PQ13434 485 aaPredicted RBP14.81□□□□□ -0.04
SOX9-AS1-214ENST00000540802 OSCARQ8IYS5 282 aa14.79□□□□□ -0.04
SOX9-AS1-214ENST00000540802 AKT1S1Q96B36 256 aa14.66□□□□□ -0.06
SOX9-AS1-214ENST00000540802 SPDYE2BA6NHP3 402 aa14.62□□□□□ -0.07
SOX9-AS1-214ENST00000540802 SPDYE6P0CI01 402 aa14.62□□□□□ -0.07
SOX9-AS1-214ENST00000540802 SPDYE2Q495Y8 402 aa14.62□□□□□ -0.07
SOX9-AS1-214ENST00000540802 REM2Q8IYK8 340 aaPredicted RBP14.51□□□□□ -0.09
SOX9-AS1-214ENST00000540802 ZNF692Q9BU19 519 aaPredicted RBP14.5□□□□□ -0.09
SOX9-AS1-214ENST00000540802 SSUH2Q9Y2M2 353 aa14.49□□□□□ -0.09
SOX9-AS1-214ENST00000540802 CHRDL2Q6WN34 429 aa14.42□□□□□ -0.1
SOX9-AS1-214ENST00000540802 POTEHQ6S545 545 aa14.35□□□□□ -0.11
SOX9-AS1-214ENST00000540802 PITPNM1O00562 1244 aa14.34□□□□□ -0.11
SOX9-AS1-214ENST00000540802 PABPN1Q86U42 306 aaKnown RBP eCLIP14.28□□□□□ -0.12
SOX9-AS1-214ENST00000540802 SPDYE4A6NLX3 237 aa14.27□□□□□ -0.13
SOX9-AS1-214ENST00000540802 SPDYE1Q8NFV5 336 aaPredicted RBP14.26□□□□□ -0.13
SOX9-AS1-214ENST00000540802 FXR2P51116 673 aaKnown RBP eCLIP14.18□□□□□ -0.14
SOX9-AS1-214ENST00000540802 CLEC11AQ9Y240 323 aa14.17□□□□□ -0.14
SOX9-AS1-214ENST00000540802 PIP4P2Q8N4L2 257 aa14.16□□□□□ -0.14
SOX9-AS1-214ENST00000540802 PROM2Q8N271 834 aa14.06□□□□□ -0.16
SOX9-AS1-214ENST00000540802 PRR29P0C7W0 189 aa14.03□□□□□ -0.16
SOX9-AS1-214ENST00000540802 STAG3Q9UJ98 1225 aa14.01□□□□□ -0.17
SOX9-AS1-214ENST00000540802 PRKAR2AP13861 404 aaKnown RBP13.97□□□□□ -0.17
SOX9-AS1-214ENST00000540802 FKBP8Q14318 412 aa13.95□□□□□ -0.18
SOX9-AS1-214ENST00000540802 CHADLQ6NUI6 762 aa13.89□□□□□ -0.19
SOX9-AS1-214ENST00000540802 CREBZFQ9NS37 354 aa13.8□□□□□ -0.2
SOX9-AS1-214ENST00000540802 HAX1O00165 279 aa13.78□□□□□ -0.2
SOX9-AS1-214ENST00000540802 FARP1Q9Y4F1 1045 aaPredicted RBP13.75□□□□□ -0.21
SOX9-AS1-214ENST00000540802 C19orf67A6NJJ6 358 aa13.7□□□□□ -0.22
SOX9-AS1-214ENST00000540802 EVX2Q03828 476 aa13.68□□□□□ -0.22
SOX9-AS1-214ENST00000540802 MNX1P50219 401 aaPredicted RBP13.64□□□□□ -0.23
SOX9-AS1-214ENST00000540802 SP7Q8TDD2 431 aaPredicted RBP13.64□□□□□ -0.23
SOX9-AS1-214ENST00000540802 MIER1Q8N108 512 aa13.57□□□□□ -0.24
SOX9-AS1-214ENST00000540802 FBXO3Q9UK99 471 aa13.57□□□□□ -0.24
SOX9-AS1-214ENST00000540802 NPM1P06748 294 aaKnown RBP eCLIP13.54□□□□□ -0.24
SOX9-AS1-214ENST00000540802 CD44P16070 742 aaKnown RBP13.53□□□□□ -0.24
SOX9-AS1-214ENST00000540802 PLEKHG5O94827 1062 aa13.49□□□□□ -0.25
SOX9-AS1-214ENST00000540802 PLCD3Q8N3E9 789 aa13.49□□□□□ -0.25
SOX9-AS1-214ENST00000540802 ZRANB1Q9UGI0 708 aa13.41□□□□□ -0.26
SOX9-AS1-214ENST00000540802 GABBR2O75899 941 aa13.39□□□□□ -0.27
SOX9-AS1-214ENST00000540802 ZBTB47Q9UFB7 747 aaPredicted RBP13.39□□□□□ -0.27
SOX9-AS1-214ENST00000540802 VASPP50552 380 aaPredicted RBP13.38□□□□□ -0.27
SOX9-AS1-214ENST00000540802 ZNF579Q8NAF0 562 aaKnown RBP13.38□□□□□ -0.27
SOX9-AS1-214ENST00000540802 PAK3O75914 559 aaPredicted RBP13.36□□□□□ -0.27
SOX9-AS1-214ENST00000540802 CLCN6P51797 869 aa13.34□□□□□ -0.27
SOX9-AS1-214ENST00000540802 NUBP1P53384 320 aa13.3□□□□□ -0.28
SOX9-AS1-214ENST00000540802 RASEFQ8IZ41 740 aa13.3□□□□□ -0.28
SOX9-AS1-214ENST00000540802 TSPYL2Q9H2G4 693 aaPredicted RBP13.28□□□□□ -0.28
SOX9-AS1-214ENST00000540802 PHF12Q96QT6 1004 aa13.25□□□□□ -0.29
SOX9-AS1-214ENST00000540802 CCDC61Q9Y6R9 512 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms