RNA–Protein interactions for RNA: ENST00000540652.5

AC025419.1-203, humanhuman

TSL 3 BASIC

Gene AC025419.1, Length 726 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025419.1-203ENST00000540652 AEBP2Q6ZN18 517 aaPredicted RBP28.05■■■□□ 2.08
AC025419.1-203ENST00000540652 CHIC1Q5VXU3 224 aa26.62■■□□□ 1.85
AC025419.1-203ENST00000540652 SENP3Q9H4L4 574 aaPredicted RBP24.05■■□□□ 1.44
AC025419.1-203ENST00000540652 PHF23Q9BUL5 403 aaPredicted RBP23.65■■□□□ 1.38
AC025419.1-203ENST00000540652 FOXD1Q16676 465 aa22.34■■□□□ 1.17
AC025419.1-203ENST00000540652 PLPPR3Q6T4P5 718 aa21.26■□□□□ 0.99
AC025419.1-203ENST00000540652 MSH5O43196 834 aa21.05■□□□□ 0.96
AC025419.1-203ENST00000540652 PIAS4Q8N2W9 510 aaPredicted RBP20.85■□□□□ 0.93
AC025419.1-203ENST00000540652 PPP6R1Q9UPN7 881 aa20.77■□□□□ 0.92
AC025419.1-203ENST00000540652 ADRA2BP18089 450 aa20.68■□□□□ 0.9
AC025419.1-203ENST00000540652 POTEDQ86YR6 584 aa20.6■□□□□ 0.89
AC025419.1-203ENST00000540652 SCAF1Q9H7N4 1312 aaKnown RBP19.09■□□□□ 0.65
AC025419.1-203ENST00000540652 DMRT2Q9Y5R5 561 aa19.05■□□□□ 0.64
AC025419.1-203ENST00000540652 MAPK8IP2Q13387 824 aaPredicted RBP19■□□□□ 0.63
AC025419.1-203ENST00000540652 PPP4R3CPQ6ZMV5 832 aa18.56■□□□□ 0.56
AC025419.1-203ENST00000540652 HOXD11P31277 338 aaPredicted RBP18.34■□□□□ 0.53
AC025419.1-203ENST00000540652 CNKSR2Q8WXI2 1034 aa18.29■□□□□ 0.52
AC025419.1-203ENST00000540652 RNF216Q9NWF9 866 aaPredicted RBP18.17■□□□□ 0.5
AC025419.1-203ENST00000540652 DCAF8L1A6NGE4 600 aa18.12■□□□□ 0.49
AC025419.1-203ENST00000540652 CACNB1Q02641 598 aaPredicted RBP18.02■□□□□ 0.48
AC025419.1-203ENST00000540652 RNF39Q9H2S5 420 aa17.92■□□□□ 0.46
AC025419.1-203ENST00000540652 NCBP3Q53F19 620 aaKnown RBP17.89■□□□□ 0.45
AC025419.1-203ENST00000540652 DNAJC5BQ9UF47 199 aa17.86■□□□□ 0.45
AC025419.1-203ENST00000540652 C1QBPQ07021 282 aaKnown RBP17.69■□□□□ 0.42
AC025419.1-203ENST00000540652 NPM3O75607 178 aaKnown RBP17.56■□□□□ 0.4
AC025419.1-203ENST00000540652 NISCHQ9Y2I1 1504 aa17.5■□□□□ 0.39
AC025419.1-203ENST00000540652 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.38■□□□□ 0.37
AC025419.1-203ENST00000540652 KCNA4P22459 653 aa17.09■□□□□ 0.33
AC025419.1-203ENST00000540652 U3KPZ7 1027 aaPredicted RBP17.03■□□□□ 0.32
AC025419.1-203ENST00000540652 SLC4A2P04920 1241 aa16.79■□□□□ 0.28
AC025419.1-203ENST00000540652 SPINK5Q9NQ38 1064 aaPredicted RBP16.75■□□□□ 0.27
AC025419.1-203ENST00000540652 CAPN15O75808 1086 aa16.74■□□□□ 0.27
AC025419.1-203ENST00000540652 DSG3P32926 999 aa16.72■□□□□ 0.27
AC025419.1-203ENST00000540652 APLP2Q06481 763 aa16.67■□□□□ 0.26
AC025419.1-203ENST00000540652 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.62■□□□□ 0.25
AC025419.1-203ENST00000540652 HNRNPUL2Q1KMD3 747 aaKnown RBP16.62■□□□□ 0.25
AC025419.1-203ENST00000540652 ZNF219Q9P2Y4 722 aaPredicted RBP16.53■□□□□ 0.24
AC025419.1-203ENST00000540652 SAMD1Q6SPF0 538 aaPredicted RBP16.49■□□□□ 0.23
AC025419.1-203ENST00000540652 TRHP20396 242 aaPredicted RBP16.42■□□□□ 0.22
AC025419.1-203ENST00000540652 MYCNP04198 464 aaPredicted RBP16.3■□□□□ 0.2
AC025419.1-203ENST00000540652 ABCB7O75027 752 aa16.28■□□□□ 0.2
AC025419.1-203ENST00000540652 SLC4A1APQ9BWU0 796 aaKnown RBP16.15■□□□□ 0.18
AC025419.1-203ENST00000540652 POTEHQ6S545 545 aa16.14■□□□□ 0.17
AC025419.1-203ENST00000540652 FOXD4L1Q9NU39 408 aa16.06■□□□□ 0.16
AC025419.1-203ENST00000540652 RBM42Q9BTD8 480 aaKnown RBP16.04■□□□□ 0.16
AC025419.1-203ENST00000540652 POLA2Q14181 598 aa16■□□□□ 0.15
AC025419.1-203ENST00000540652 ATF5Q9Y2D1 282 aaPredicted RBP15.8■□□□□ 0.12
AC025419.1-203ENST00000540652 ZBTB12Q9Y330 459 aaPredicted RBP15.8■□□□□ 0.12
AC025419.1-203ENST00000540652 ABCC9O60706 1549 aa15.78■□□□□ 0.12
AC025419.1-203ENST00000540652 CCDC180Q9P1Z9 1646 aa15.78■□□□□ 0.12
AC025419.1-203ENST00000540652 ZBTB22O15209 634 aa15.69■□□□□ 0.1
AC025419.1-203ENST00000540652 ATXN8OSP0DMR3 200 aa15.67■□□□□ 0.1
AC025419.1-203ENST00000540652 CHRDL2Q6WN34 429 aa15.65■□□□□ 0.1
AC025419.1-203ENST00000540652 AKT1S1Q96B36 256 aa15.62■□□□□ 0.09
AC025419.1-203ENST00000540652 OSCARQ8IYS5 282 aa15.48■□□□□ 0.07
AC025419.1-203ENST00000540652 REM2Q8IYK8 340 aaPredicted RBP15.41■□□□□ 0.06
AC025419.1-203ENST00000540652 FBLN2P98095 1184 aa15.3■□□□□ 0.04
AC025419.1-203ENST00000540652 SPDYE2BA6NHP3 402 aa15.27■□□□□ 0.04
AC025419.1-203ENST00000540652 SPDYE6P0CI01 402 aa15.27■□□□□ 0.04
AC025419.1-203ENST00000540652 SPDYE2Q495Y8 402 aa15.27■□□□□ 0.04
AC025419.1-203ENST00000540652 PITPNM1O00562 1244 aa15.23■□□□□ 0.03
AC025419.1-203ENST00000540652 PIP4P2Q8N4L2 257 aa15.23■□□□□ 0.03
AC025419.1-203ENST00000540652 FXR2P51116 673 aaKnown RBP eCLIP15.18■□□□□ 0.02
AC025419.1-203ENST00000540652 MKRN4PQ13434 485 aaPredicted RBP15.12■□□□□ 0.01
AC025419.1-203ENST00000540652 SP7Q8TDD2 431 aaPredicted RBP15.1■□□□□ 0.01
AC025419.1-203ENST00000540652 SSUH2Q9Y2M2 353 aa15.04■□□□□ -0
AC025419.1-203ENST00000540652 SPDYE1Q8NFV5 336 aaPredicted RBP15.01□□□□□ -0.01
AC025419.1-203ENST00000540652 RB1CC1Q8TDY2 1594 aa15.01□□□□□ -0.01
AC025419.1-203ENST00000540652 ZNF692Q9BU19 519 aaPredicted RBP14.99□□□□□ -0.01
AC025419.1-203ENST00000540652 HAX1O00165 279 aa14.95□□□□□ -0.02
AC025419.1-203ENST00000540652 CSRNP3Q8WYN3 585 aa14.92□□□□□ -0.02
AC025419.1-203ENST00000540652 NACADO15069 1562 aa14.89□□□□□ -0.03
AC025419.1-203ENST00000540652 CLEC11AQ9Y240 323 aa14.87□□□□□ -0.03
AC025419.1-203ENST00000540652 PRKAR2AP13861 404 aaKnown RBP14.83□□□□□ -0.04
AC025419.1-203ENST00000540652 PABPN1Q86U42 306 aaKnown RBP eCLIP14.76□□□□□ -0.05
AC025419.1-203ENST00000540652 UNC13AQ9UPW8 1703 aa14.75□□□□□ -0.05
AC025419.1-203ENST00000540652 EVX2Q03828 476 aa14.72□□□□□ -0.05
AC025419.1-203ENST00000540652 C19orf67A6NJJ6 358 aa14.69□□□□□ -0.06
AC025419.1-203ENST00000540652 PRR29P0C7W0 189 aa14.68□□□□□ -0.06
AC025419.1-203ENST00000540652 MYO15BQ96JP2 1530 aa14.67□□□□□ -0.06
AC025419.1-203ENST00000540652 DCAF8L2P0C7V8 631 aa14.66□□□□□ -0.06
AC025419.1-203ENST00000540652 BICRAQ9NZM4 1560 aa14.63□□□□□ -0.07
AC025419.1-203ENST00000540652 CHADLQ6NUI6 762 aa14.58□□□□□ -0.08
AC025419.1-203ENST00000540652 EHMT2Q96KQ7 1210 aa14.57□□□□□ -0.08
AC025419.1-203ENST00000540652 ZCCHC6Q5VYS8 1495 aaKnown RBP14.51□□□□□ -0.09
AC025419.1-203ENST00000540652 DCAF1Q9Y4B6 1507 aa14.46□□□□□ -0.09
AC025419.1-203ENST00000540652 GABBR2O75899 941 aa14.45□□□□□ -0.1
AC025419.1-203ENST00000540652 FARP1Q9Y4F1 1045 aaPredicted RBP14.45□□□□□ -0.1
AC025419.1-203ENST00000540652 STAG3Q9UJ98 1225 aa14.44□□□□□ -0.1
AC025419.1-203ENST00000540652 SHROOM4Q9ULL8 1493 aa14.39□□□□□ -0.11
AC025419.1-203ENST00000540652 CLCN6P51797 869 aa14.39□□□□□ -0.11
AC025419.1-203ENST00000540652 SPDYE4A6NLX3 237 aa14.37□□□□□ -0.11
AC025419.1-203ENST00000540652 CD44P16070 742 aaKnown RBP14.37□□□□□ -0.11
AC025419.1-203ENST00000540652 SCRIBQ14160 1630 aa14.34□□□□□ -0.11
AC025419.1-203ENST00000540652 CREBZFQ9NS37 354 aa14.29□□□□□ -0.12
AC025419.1-203ENST00000540652 CC2D2AQ9P2K1 1620 aa14.29□□□□□ -0.12
AC025419.1-203ENST00000540652 EIF4G1Q04637 1599 aaKnown RBP14.24□□□□□ -0.13
AC025419.1-203ENST00000540652 CECR2Q9BXF3 1484 aa14.22□□□□□ -0.13
AC025419.1-203ENST00000540652 ZNF579Q8NAF0 562 aaKnown RBP14.21□□□□□ -0.13
AC025419.1-203ENST00000540652 LHX8Q68G74 356 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms