RNA–Protein interactions for RNA: ENST00000539655.1

AC243972.3-201, humanhuman

BASIC

Gene AC243972.3, Length 198 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243972.3-201ENST00000539655 AEBP2Q6ZN18 517 aaPredicted RBP21.5■■□□□ 1.03
AC243972.3-201ENST00000539655 CHIC1Q5VXU3 224 aa20.63■□□□□ 0.89
AC243972.3-201ENST00000539655 SENP3Q9H4L4 574 aaPredicted RBP18.34■□□□□ 0.53
AC243972.3-201ENST00000539655 PHF23Q9BUL5 403 aaPredicted RBP18.1■□□□□ 0.49
AC243972.3-201ENST00000539655 FOXD1Q16676 465 aa17.05■□□□□ 0.32
AC243972.3-201ENST00000539655 PLPPR3Q6T4P5 718 aa16.56■□□□□ 0.24
AC243972.3-201ENST00000539655 PPP6R1Q9UPN7 881 aa16.05■□□□□ 0.16
AC243972.3-201ENST00000539655 ADRA2BP18089 450 aa15.99■□□□□ 0.15
AC243972.3-201ENST00000539655 PIAS4Q8N2W9 510 aaPredicted RBP15.95■□□□□ 0.14
AC243972.3-201ENST00000539655 MSH5O43196 834 aa15.92■□□□□ 0.14
AC243972.3-201ENST00000539655 POTEDQ86YR6 584 aa15.19■□□□□ 0.02
AC243972.3-201ENST00000539655 SCAF1Q9H7N4 1312 aaKnown RBP14.69□□□□□ -0.06
AC243972.3-201ENST00000539655 MAPK8IP2Q13387 824 aaPredicted RBP14.62□□□□□ -0.07
AC243972.3-201ENST00000539655 DMRT2Q9Y5R5 561 aa14.58□□□□□ -0.08
AC243972.3-201ENST00000539655 PPP4R3CPQ6ZMV5 832 aa14.51□□□□□ -0.09
AC243972.3-201ENST00000539655 CNKSR2Q8WXI2 1034 aa14.22□□□□□ -0.13
AC243972.3-201ENST00000539655 HOXD11P31277 338 aaPredicted RBP14.13□□□□□ -0.15
AC243972.3-201ENST00000539655 RNF216Q9NWF9 866 aaPredicted RBP14.07□□□□□ -0.16
AC243972.3-201ENST00000539655 NCBP3Q53F19 620 aaKnown RBP14.02□□□□□ -0.17
AC243972.3-201ENST00000539655 DCAF8L1A6NGE4 600 aa13.85□□□□□ -0.19
AC243972.3-201ENST00000539655 NPM3O75607 178 aaKnown RBP13.81□□□□□ -0.2
AC243972.3-201ENST00000539655 DNAJC5BQ9UF47 199 aa13.69□□□□□ -0.22
AC243972.3-201ENST00000539655 KCNA4P22459 653 aa13.68□□□□□ -0.22
AC243972.3-201ENST00000539655 RNF39Q9H2S5 420 aa13.59□□□□□ -0.23
AC243972.3-201ENST00000539655 CACNB1Q02641 598 aaPredicted RBP13.48□□□□□ -0.25
AC243972.3-201ENST00000539655 C1QBPQ07021 282 aaKnown RBP13.42□□□□□ -0.26
AC243972.3-201ENST00000539655 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.38□□□□□ -0.27
AC243972.3-201ENST00000539655 U3KPZ7 1027 aaPredicted RBP13.16□□□□□ -0.3
AC243972.3-201ENST00000539655 SLC4A2P04920 1241 aa13.15□□□□□ -0.3
AC243972.3-201ENST00000539655 SLC4A1APQ9BWU0 796 aaKnown RBP12.95□□□□□ -0.34
AC243972.3-201ENST00000539655 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.89□□□□□ -0.35
AC243972.3-201ENST00000539655 HNRNPUL2Q1KMD3 747 aaKnown RBP12.89□□□□□ -0.35
AC243972.3-201ENST00000539655 SPINK5Q9NQ38 1064 aaPredicted RBP12.88□□□□□ -0.35
AC243972.3-201ENST00000539655 APLP2Q06481 763 aa12.85□□□□□ -0.35
AC243972.3-201ENST00000539655 CAPN15O75808 1086 aa12.83□□□□□ -0.36
AC243972.3-201ENST00000539655 SAMD1Q6SPF0 538 aaPredicted RBP12.81□□□□□ -0.36
AC243972.3-201ENST00000539655 MYCNP04198 464 aaPredicted RBP12.79□□□□□ -0.36
AC243972.3-201ENST00000539655 DSG3P32926 999 aa12.78□□□□□ -0.36
AC243972.3-201ENST00000539655 FOXD4L1Q9NU39 408 aa12.75□□□□□ -0.37
AC243972.3-201ENST00000539655 ZNF219Q9P2Y4 722 aaPredicted RBP12.72□□□□□ -0.37
AC243972.3-201ENST00000539655 TRHP20396 242 aaPredicted RBP12.66□□□□□ -0.38
AC243972.3-201ENST00000539655 ZBTB22O15209 634 aa12.58□□□□□ -0.4
AC243972.3-201ENST00000539655 ABCB7O75027 752 aa12.53□□□□□ -0.4
AC243972.3-201ENST00000539655 ATF5Q9Y2D1 282 aaPredicted RBP12.43□□□□□ -0.42
AC243972.3-201ENST00000539655 ATXN8OSP0DMR3 200 aa12.38□□□□□ -0.43
AC243972.3-201ENST00000539655 POLA2Q14181 598 aa12.38□□□□□ -0.43
AC243972.3-201ENST00000539655 ZBTB12Q9Y330 459 aaPredicted RBP12.22□□□□□ -0.45
AC243972.3-201ENST00000539655 RBM42Q9BTD8 480 aaKnown RBP12.21□□□□□ -0.45
AC243972.3-201ENST00000539655 CSRNP3Q8WYN3 585 aa12.17□□□□□ -0.46
AC243972.3-201ENST00000539655 EHMT2Q96KQ7 1210 aa12.03□□□□□ -0.48
AC243972.3-201ENST00000539655 OSCARQ8IYS5 282 aa11.99□□□□□ -0.49
AC243972.3-201ENST00000539655 AKT1S1Q96B36 256 aa11.97□□□□□ -0.49
AC243972.3-201ENST00000539655 FBLN2P98095 1184 aa11.96□□□□□ -0.49
AC243972.3-201ENST00000539655 POTEHQ6S545 545 aa11.94□□□□□ -0.5
AC243972.3-201ENST00000539655 MKRN4PQ13434 485 aaPredicted RBP11.89□□□□□ -0.51
AC243972.3-201ENST00000539655 SPDYE2BA6NHP3 402 aa11.85□□□□□ -0.51
AC243972.3-201ENST00000539655 SPDYE6P0CI01 402 aa11.85□□□□□ -0.51
AC243972.3-201ENST00000539655 SPDYE2Q495Y8 402 aa11.85□□□□□ -0.51
AC243972.3-201ENST00000539655 CHRDL2Q6WN34 429 aa11.83□□□□□ -0.52
AC243972.3-201ENST00000539655 REM2Q8IYK8 340 aaPredicted RBP11.82□□□□□ -0.52
AC243972.3-201ENST00000539655 SSUH2Q9Y2M2 353 aa11.73□□□□□ -0.53
AC243972.3-201ENST00000539655 PITPNM1O00562 1244 aa11.68□□□□□ -0.54
AC243972.3-201ENST00000539655 ZNF692Q9BU19 519 aaPredicted RBP11.68□□□□□ -0.54
AC243972.3-201ENST00000539655 FXR2P51116 673 aaKnown RBP eCLIP11.59□□□□□ -0.55
AC243972.3-201ENST00000539655 PIP4P2Q8N4L2 257 aa11.59□□□□□ -0.55
AC243972.3-201ENST00000539655 SPDYE1Q8NFV5 336 aaPredicted RBP11.59□□□□□ -0.55
AC243972.3-201ENST00000539655 PABPN1Q86U42 306 aaKnown RBP eCLIP11.52□□□□□ -0.57
AC243972.3-201ENST00000539655 CLEC11AQ9Y240 323 aa11.48□□□□□ -0.57
AC243972.3-201ENST00000539655 SPDYE4A6NLX3 237 aa11.41□□□□□ -0.58
AC243972.3-201ENST00000539655 PRKAR2AP13861 404 aaKnown RBP11.37□□□□□ -0.59
AC243972.3-201ENST00000539655 PRR29P0C7W0 189 aa11.35□□□□□ -0.59
AC243972.3-201ENST00000539655 HAX1O00165 279 aa11.29□□□□□ -0.6
AC243972.3-201ENST00000539655 SP7Q8TDD2 431 aaPredicted RBP11.29□□□□□ -0.6
AC243972.3-201ENST00000539655 STAG3Q9UJ98 1225 aa11.29□□□□□ -0.6
AC243972.3-201ENST00000539655 PROM2Q8N271 834 aa11.25□□□□□ -0.61
AC243972.3-201ENST00000539655 CHADLQ6NUI6 762 aa11.24□□□□□ -0.61
AC243972.3-201ENST00000539655 C19orf67A6NJJ6 358 aa11.2□□□□□ -0.62
AC243972.3-201ENST00000539655 EVX2Q03828 476 aa11.17□□□□□ -0.62
AC243972.3-201ENST00000539655 FARP1Q9Y4F1 1045 aaPredicted RBP11.15□□□□□ -0.62
AC243972.3-201ENST00000539655 CREBZFQ9NS37 354 aa11.14□□□□□ -0.63
AC243972.3-201ENST00000539655 CD44P16070 742 aaKnown RBP11.03□□□□□ -0.64
AC243972.3-201ENST00000539655 FKBP8Q14318 412 aa11□□□□□ -0.65
AC243972.3-201ENST00000539655 MNX1P50219 401 aaPredicted RBP10.99□□□□□ -0.65
AC243972.3-201ENST00000539655 GABBR2O75899 941 aa10.95□□□□□ -0.66
AC243972.3-201ENST00000539655 NPM1P06748 294 aaKnown RBP eCLIP10.95□□□□□ -0.66
AC243972.3-201ENST00000539655 CLCN6P51797 869 aa10.95□□□□□ -0.66
AC243972.3-201ENST00000539655 ZNF579Q8NAF0 562 aaKnown RBP10.92□□□□□ -0.66
AC243972.3-201ENST00000539655 ZRANB1Q9UGI0 708 aa10.89□□□□□ -0.67
AC243972.3-201ENST00000539655 PAK3O75914 559 aaPredicted RBP10.86□□□□□ -0.67
AC243972.3-201ENST00000539655 PLEKHG5O94827 1062 aa10.85□□□□□ -0.67
AC243972.3-201ENST00000539655 MIER1Q8N108 512 aa10.83□□□□□ -0.68
AC243972.3-201ENST00000539655 PLCD3Q8N3E9 789 aa10.77□□□□□ -0.69
AC243972.3-201ENST00000539655 FBXO3Q9UK99 471 aa10.77□□□□□ -0.69
AC243972.3-201ENST00000539655 PHF12Q96QT6 1004 aa10.74□□□□□ -0.69
AC243972.3-201ENST00000539655 ZBTB47Q9UFB7 747 aaPredicted RBP10.74□□□□□ -0.69
AC243972.3-201ENST00000539655 POTEIP0CG38 1075 aa10.73□□□□□ -0.69
AC243972.3-201ENST00000539655 GALR2O43603 387 aaPredicted RBP10.72□□□□□ -0.69
AC243972.3-201ENST00000539655 CCDC61Q9Y6R9 512 aa10.71□□□□□ -0.69
AC243972.3-201ENST00000539655 TSPYL2Q9H2G4 693 aaPredicted RBP10.69□□□□□ -0.7
AC243972.3-201ENST00000539655 RASEFQ8IZ41 740 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms