RNA–Protein interactions for RNA: ENST00000539610.1

MAP3K4-209, Transcript of mitogen-activated protein kinase kinase kinase 4, humanhuman

TSL 3

Gene MAP3K4, Length 295 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP3K4-209ENST00000539610 AEBP2Q6ZN18 517 aaPredicted RBP17.29■□□□□ 0.36
MAP3K4-209ENST00000539610 CHIC1Q5VXU3 224 aa16.12■□□□□ 0.17
MAP3K4-209ENST00000539610 SENP3Q9H4L4 574 aaPredicted RBP14.79□□□□□ -0.04
MAP3K4-209ENST00000539610 PHF23Q9BUL5 403 aaPredicted RBP14.56□□□□□ -0.08
MAP3K4-209ENST00000539610 FOXD1Q16676 465 aa13.87□□□□□ -0.19
MAP3K4-209ENST00000539610 POTEDQ86YR6 584 aa13.69□□□□□ -0.22
MAP3K4-209ENST00000539610 MSH5O43196 834 aa13.15□□□□□ -0.3
MAP3K4-209ENST00000539610 PIAS4Q8N2W9 510 aaPredicted RBP12.83□□□□□ -0.36
MAP3K4-209ENST00000539610 PPP6R1Q9UPN7 881 aa12.6□□□□□ -0.39
MAP3K4-209ENST00000539610 ADRA2BP18089 450 aa12.53□□□□□ -0.4
MAP3K4-209ENST00000539610 PLPPR3Q6T4P5 718 aa12.49□□□□□ -0.41
MAP3K4-209ENST00000539610 MAPK8IP2Q13387 824 aaPredicted RBP11.66□□□□□ -0.54
MAP3K4-209ENST00000539610 DMRT2Q9Y5R5 561 aa11.66□□□□□ -0.54
MAP3K4-209ENST00000539610 CACNB1Q02641 598 aaPredicted RBP11.6□□□□□ -0.55
MAP3K4-209ENST00000539610 SCAF1Q9H7N4 1312 aaKnown RBP11.44□□□□□ -0.58
MAP3K4-209ENST00000539610 DCAF8L1A6NGE4 600 aa11.21□□□□□ -0.61
MAP3K4-209ENST00000539610 RNF39Q9H2S5 420 aa11.18□□□□□ -0.62
MAP3K4-209ENST00000539610 HOXD11P31277 338 aaPredicted RBP11.05□□□□□ -0.64
MAP3K4-209ENST00000539610 C1QBPQ07021 282 aaKnown RBP10.98□□□□□ -0.65
MAP3K4-209ENST00000539610 PPP4R3CPQ6ZMV5 832 aa10.9□□□□□ -0.66
MAP3K4-209ENST00000539610 RNF216Q9NWF9 866 aaPredicted RBP10.83□□□□□ -0.68
MAP3K4-209ENST00000539610 CNKSR2Q8WXI2 1034 aa10.8□□□□□ -0.68
MAP3K4-209ENST00000539610 DNAJC5BQ9UF47 199 aa10.75□□□□□ -0.69
MAP3K4-209ENST00000539610 POTEHQ6S545 545 aa10.62□□□□□ -0.71
MAP3K4-209ENST00000539610 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.52□□□□□ -0.732e-7■■■■□ 21.1
MAP3K4-209ENST00000539610 NCBP3Q53F19 620 aaKnown RBP10.32□□□□□ -0.76
MAP3K4-209ENST00000539610 DSG3P32926 999 aa10.31□□□□□ -0.76
MAP3K4-209ENST00000539610 CAPN15O75808 1086 aa10.25□□□□□ -0.77
MAP3K4-209ENST00000539610 SPINK5Q9NQ38 1064 aaPredicted RBP10.25□□□□□ -0.77
MAP3K4-209ENST00000539610 U3KPZ7 1027 aaPredicted RBP10.25□□□□□ -0.77
MAP3K4-209ENST00000539610 NPM3O75607 178 aaKnown RBP10.18□□□□□ -0.78
MAP3K4-209ENST00000539610 ABCB7O75027 752 aa9.98□□□□□ -0.81
MAP3K4-209ENST00000539610 TRHP20396 242 aaPredicted RBP9.97□□□□□ -0.81
MAP3K4-209ENST00000539610 ZNF219Q9P2Y4 722 aaPredicted RBP9.92□□□□□ -0.82
MAP3K4-209ENST00000539610 APLP2Q06481 763 aa9.88□□□□□ -0.83
MAP3K4-209ENST00000539610 SLC4A2P04920 1241 aa9.86□□□□□ -0.83
MAP3K4-209ENST00000539610 RBM42Q9BTD8 480 aaKnown RBP9.83□□□□□ -0.84
MAP3K4-209ENST00000539610 CHRDL2Q6WN34 429 aa9.82□□□□□ -0.84
MAP3K4-209ENST00000539610 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.76□□□□□ -0.85
MAP3K4-209ENST00000539610 HNRNPUL2Q1KMD3 747 aaKnown RBP9.76□□□□□ -0.85
MAP3K4-209ENST00000539610 SP7Q8TDD2 431 aaPredicted RBP9.73□□□□□ -0.85
MAP3K4-209ENST00000539610 SAMD1Q6SPF0 538 aaPredicted RBP9.69□□□□□ -0.86
MAP3K4-209ENST00000539610 POLA2Q14181 598 aa9.59□□□□□ -0.87
MAP3K4-209ENST00000539610 KCNA4P22459 653 aa9.56□□□□□ -0.88
MAP3K4-209ENST00000539610 AKT1S1Q96B36 256 aa9.52□□□□□ -0.89
MAP3K4-209ENST00000539610 PIP4P2Q8N4L2 257 aa9.5□□□□□ -0.89
MAP3K4-209ENST00000539610 HAX1O00165 279 aa9.45□□□□□ -0.9
MAP3K4-209ENST00000539610 REM2Q8IYK8 340 aaPredicted RBP9.43□□□□□ -0.9
MAP3K4-209ENST00000539610 MYCNP04198 464 aaPredicted RBP9.42□□□□□ -0.9
MAP3K4-209ENST00000539610 FXR2P51116 673 aaKnown RBP eCLIP9.36□□□□□ -0.91
MAP3K4-209ENST00000539610 PITPNM1O00562 1244 aa9.34□□□□□ -0.91
MAP3K4-209ENST00000539610 ZBTB12Q9Y330 459 aaPredicted RBP9.33□□□□□ -0.92
MAP3K4-209ENST00000539610 EVX2Q03828 476 aa9.32□□□□□ -0.92
MAP3K4-209ENST00000539610 OSCARQ8IYS5 282 aa9.3□□□□□ -0.92
MAP3K4-209ENST00000539610 ATF5Q9Y2D1 282 aaPredicted RBP9.26□□□□□ -0.93
MAP3K4-209ENST00000539610 LHX8Q68G74 356 aa9.12□□□□□ -0.95
MAP3K4-209ENST00000539610 PRKAR2AP13861 404 aaKnown RBP9.09□□□□□ -0.95
MAP3K4-209ENST00000539610 C19orf67A6NJJ6 358 aa9.08□□□□□ -0.96
MAP3K4-209ENST00000539610 GABBR2O75899 941 aa9.07□□□□□ -0.96
MAP3K4-209ENST00000539610 FOXD4L1Q9NU39 408 aa9.06□□□□□ -0.96
MAP3K4-209ENST00000539610 SPDYE2BA6NHP3 402 aa9.02□□□□□ -0.97
MAP3K4-209ENST00000539610 SPDYE6P0CI01 402 aa9.02□□□□□ -0.97
MAP3K4-209ENST00000539610 SPDYE2Q495Y8 402 aa9.02□□□□□ -0.97
MAP3K4-209ENST00000539610 CLEC11AQ9Y240 323 aa9.01□□□□□ -0.97
MAP3K4-209ENST00000539610 SPDYE1Q8NFV5 336 aaPredicted RBP8.99□□□□□ -0.97
MAP3K4-209ENST00000539610 PLSCR2Q9NRY7 297 aa8.95□□□□□ -0.98
MAP3K4-209ENST00000539610 FBLN2P98095 1184 aa8.91□□□□□ -0.98
MAP3K4-209ENST00000539610 SLC4A1APQ9BWU0 796 aaKnown RBP8.91□□□□□ -0.98
MAP3K4-209ENST00000539610 CHADLQ6NUI6 762 aa8.9□□□□□ -0.98
MAP3K4-209ENST00000539610 POTEIP0CG38 1075 aa8.88□□□□□ -0.99
MAP3K4-209ENST00000539610 SSUH2Q9Y2M2 353 aa8.85□□□□□ -0.99
MAP3K4-209ENST00000539610 ZNF692Q9BU19 519 aaPredicted RBP8.84□□□□□ -0.99
MAP3K4-209ENST00000539610 ATXN8OSP0DMR3 200 aa8.82□□□□□ -1
MAP3K4-209ENST00000539610 MKRN4PQ13434 485 aaPredicted RBP8.81□□□□□ -1
MAP3K4-209ENST00000539610 PRR29P0C7W0 189 aa8.78□□□□□ -1
MAP3K4-209ENST00000539610 ZBTB22O15209 634 aa8.77□□□□□ -1.01
MAP3K4-209ENST00000539610 CD44P16070 742 aaKnown RBP8.77□□□□□ -1.01
MAP3K4-209ENST00000539610 CLCN6P51797 869 aa8.73□□□□□ -1.01
MAP3K4-209ENST00000539610 DCBLD2Q96PD2 775 aa8.71□□□□□ -1.02
MAP3K4-209ENST00000539610 PABPN1Q86U42 306 aaKnown RBP eCLIP8.7□□□□□ -1.02
MAP3K4-209ENST00000539610 FARP1Q9Y4F1 1045 aaPredicted RBP8.7□□□□□ -1.02
MAP3K4-209ENST00000539610 OTUD5Q96G74 571 aa8.64□□□□□ -1.03
MAP3K4-209ENST00000539610 POTEMA6NI47 508 aa8.61□□□□□ -1.03
MAP3K4-209ENST00000539610 ZNF579Q8NAF0 562 aaKnown RBP8.61□□□□□ -1.03
MAP3K4-209ENST00000539610 POTEB2H3BUK9 544 aa8.59□□□□□ -1.03
MAP3K4-209ENST00000539610 ZRANB1Q9UGI0 708 aa8.58□□□□□ -1.04
MAP3K4-209ENST00000539610 POTEGQ6S5H5 508 aa8.57□□□□□ -1.04
MAP3K4-209ENST00000539610 GALR2O43603 387 aaPredicted RBP8.55□□□□□ -1.04
MAP3K4-209ENST00000539610 PCDH10Q9P2E7 1040 aa8.49□□□□□ -1.05
MAP3K4-209ENST00000539610 CREBZFQ9NS37 354 aa8.46□□□□□ -1.06
MAP3K4-209ENST00000539610 PELP1Q8IZL8 1130 aaKnown RBP8.44□□□□□ -1.06
MAP3K4-209ENST00000539610 PHF12Q96QT6 1004 aa8.41□□□□□ -1.06
MAP3K4-209ENST00000539610 PAK3O75914 559 aaPredicted RBP8.38□□□□□ -1.07
MAP3K4-209ENST00000539610 POTEJP0CG39 1038 aa8.37□□□□□ -1.07
MAP3K4-209ENST00000539610 LCE2DQ5TA82 110 aaPredicted RBP8.37□□□□□ -1.07
MAP3K4-209ENST00000539610 METRNQ9UJH8 293 aa8.36□□□□□ -1.07
MAP3K4-209ENST00000539610 STAG3Q9UJ98 1225 aa8.35□□□□□ -1.07
MAP3K4-209ENST00000539610 ASTLQ6HA08 431 aaPredicted RBP8.33□□□□□ -1.08
MAP3K4-209ENST00000539610 FAM163AQ96GL9 167 aaPredicted RBP8.33□□□□□ -1.08
MAP3K4-209ENST00000539610 C7P10643 843 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms