RNA–Protein interactions for RNA: ENST00000539013.5

KNTC1-210, Transcript of kinetochore associated 1, humanhuman

TSL 5

Gene KNTC1, Length 615 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-210ENST00000539013 AEBP2Q6ZN18 517 aaPredicted RBP21.87■■□□□ 1.09
KNTC1-210ENST00000539013 CHIC1Q5VXU3 224 aa20.96■□□□□ 0.95
KNTC1-210ENST00000539013 SENP3Q9H4L4 574 aaPredicted RBP18.75■□□□□ 0.59
KNTC1-210ENST00000539013 PHF23Q9BUL5 403 aaPredicted RBP18.47■□□□□ 0.55
KNTC1-210ENST00000539013 FOXD1Q16676 465 aa17.38■□□□□ 0.37
KNTC1-210ENST00000539013 PLPPR3Q6T4P5 718 aa16.84■□□□□ 0.29
KNTC1-210ENST00000539013 MSH5O43196 834 aa16.32■□□□□ 0.2
KNTC1-210ENST00000539013 PPP6R1Q9UPN7 881 aa16.3■□□□□ 0.2
KNTC1-210ENST00000539013 PIAS4Q8N2W9 510 aaPredicted RBP16.28■□□□□ 0.2
KNTC1-210ENST00000539013 ADRA2BP18089 450 aa16.26■□□□□ 0.19
KNTC1-210ENST00000539013 POTEDQ86YR6 584 aa15.63■□□□□ 0.09
KNTC1-210ENST00000539013 SCAF1Q9H7N4 1312 aaKnown RBP15.03■□□□□ -0
KNTC1-210ENST00000539013 MAPK8IP2Q13387 824 aaPredicted RBP14.88□□□□□ -0.03
KNTC1-210ENST00000539013 DMRT2Q9Y5R5 561 aa14.87□□□□□ -0.03
KNTC1-210ENST00000539013 PPP4R3CPQ6ZMV5 832 aa14.73□□□□□ -0.05
KNTC1-210ENST00000539013 CNKSR2Q8WXI2 1034 aa14.48□□□□□ -0.09
KNTC1-210ENST00000539013 HOXD11P31277 338 aaPredicted RBP14.39□□□□□ -0.11
KNTC1-210ENST00000539013 RNF216Q9NWF9 866 aaPredicted RBP14.32□□□□□ -0.12
KNTC1-210ENST00000539013 NCBP3Q53F19 620 aaKnown RBP14.28□□□□□ -0.12
KNTC1-210ENST00000539013 DCAF8L1A6NGE4 600 aa14.18□□□□□ -0.14
KNTC1-210ENST00000539013 NPM3O75607 178 aaKnown RBP13.98□□□□□ -0.17
KNTC1-210ENST00000539013 DNAJC5BQ9UF47 199 aa13.97□□□□□ -0.17
KNTC1-210ENST00000539013 RNF39Q9H2S5 420 aa13.89□□□□□ -0.19
KNTC1-210ENST00000539013 CACNB1Q02641 598 aaPredicted RBP13.87□□□□□ -0.19
KNTC1-210ENST00000539013 KCNA4P22459 653 aa13.78□□□□□ -0.2
KNTC1-210ENST00000539013 C1QBPQ07021 282 aaKnown RBP13.74□□□□□ -0.21
KNTC1-210ENST00000539013 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.67□□□□□ -0.22
KNTC1-210ENST00000539013 U3KPZ7 1027 aaPredicted RBP13.38□□□□□ -0.27
KNTC1-210ENST00000539013 SLC4A2P04920 1241 aa13.31□□□□□ -0.28
KNTC1-210ENST00000539013 APLP2Q06481 763 aa13.17□□□□□ -0.3
KNTC1-210ENST00000539013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.16□□□□□ -0.3
KNTC1-210ENST00000539013 HNRNPUL2Q1KMD3 747 aaKnown RBP13.16□□□□□ -0.3
KNTC1-210ENST00000539013 CAPN15O75808 1086 aa13.12□□□□□ -0.31
KNTC1-210ENST00000539013 SPINK5Q9NQ38 1064 aaPredicted RBP13.11□□□□□ -0.31
KNTC1-210ENST00000539013 SLC4A1APQ9BWU0 796 aaKnown RBP13.08□□□□□ -0.32
KNTC1-210ENST00000539013 SAMD1Q6SPF0 538 aaPredicted RBP13.05□□□□□ -0.32
KNTC1-210ENST00000539013 DSG3P32926 999 aa13.03□□□□□ -0.32
KNTC1-210ENST00000539013 ZNF219Q9P2Y4 722 aaPredicted RBP13□□□□□ -0.33
KNTC1-210ENST00000539013 MYCNP04198 464 aaPredicted RBP12.98□□□□□ -0.33
KNTC1-210ENST00000539013 TRHP20396 242 aaPredicted RBP12.92□□□□□ -0.34
KNTC1-210ENST00000539013 FOXD4L1Q9NU39 408 aa12.9□□□□□ -0.34
KNTC1-210ENST00000539013 ABCB7O75027 752 aa12.78□□□□□ -0.36
KNTC1-210ENST00000539013 ZBTB22O15209 634 aa12.64□□□□□ -0.39
KNTC1-210ENST00000539013 POLA2Q14181 598 aa12.63□□□□□ -0.39
KNTC1-210ENST00000539013 ATXN8OSP0DMR3 200 aa12.56□□□□□ -0.4
KNTC1-210ENST00000539013 ATF5Q9Y2D1 282 aaPredicted RBP12.56□□□□□ -0.4
KNTC1-210ENST00000539013 RBM42Q9BTD8 480 aaKnown RBP12.51□□□□□ -0.41
KNTC1-210ENST00000539013 ZBTB12Q9Y330 459 aaPredicted RBP12.49□□□□□ -0.41
KNTC1-210ENST00000539013 POTEHQ6S545 545 aa12.29□□□□□ -0.44
KNTC1-210ENST00000539013 NISCHQ9Y2I1 1504 aa12.24□□□□□ -0.45
KNTC1-210ENST00000539013 AKT1S1Q96B36 256 aa12.23□□□□□ -0.45
KNTC1-210ENST00000539013 CSRNP3Q8WYN3 585 aa12.21□□□□□ -0.45
KNTC1-210ENST00000539013 FBLN2P98095 1184 aa12.19□□□□□ -0.46
KNTC1-210ENST00000539013 OSCARQ8IYS5 282 aa12.19□□□□□ -0.46
KNTC1-210ENST00000539013 CHRDL2Q6WN34 429 aa12.12□□□□□ -0.47
KNTC1-210ENST00000539013 SPDYE2BA6NHP3 402 aa12.07□□□□□ -0.48
KNTC1-210ENST00000539013 SPDYE6P0CI01 402 aa12.07□□□□□ -0.48
KNTC1-210ENST00000539013 SPDYE2Q495Y8 402 aa12.07□□□□□ -0.48
KNTC1-210ENST00000539013 REM2Q8IYK8 340 aaPredicted RBP12.06□□□□□ -0.48
KNTC1-210ENST00000539013 EHMT2Q96KQ7 1210 aa12.06□□□□□ -0.48
KNTC1-210ENST00000539013 MKRN4PQ13434 485 aaPredicted RBP12.01□□□□□ -0.49
KNTC1-210ENST00000539013 PITPNM1O00562 1244 aa11.91□□□□□ -0.5
KNTC1-210ENST00000539013 ZNF692Q9BU19 519 aaPredicted RBP11.91□□□□□ -0.5
KNTC1-210ENST00000539013 SSUH2Q9Y2M2 353 aa11.89□□□□□ -0.51
KNTC1-210ENST00000539013 PIP4P2Q8N4L2 257 aa11.84□□□□□ -0.51
KNTC1-210ENST00000539013 FXR2P51116 673 aaKnown RBP eCLIP11.83□□□□□ -0.52
KNTC1-210ENST00000539013 SPDYE1Q8NFV5 336 aaPredicted RBP11.82□□□□□ -0.52
KNTC1-210ENST00000539013 CLEC11AQ9Y240 323 aa11.73□□□□□ -0.53
KNTC1-210ENST00000539013 PABPN1Q86U42 306 aaKnown RBP eCLIP11.71□□□□□ -0.532e-7■■■■□ 20.4
KNTC1-210ENST00000539013 PRKAR2AP13861 404 aaKnown RBP11.61□□□□□ -0.55
KNTC1-210ENST00000539013 PRR29P0C7W0 189 aa11.6□□□□□ -0.55
KNTC1-210ENST00000539013 HAX1O00165 279 aa11.59□□□□□ -0.55
KNTC1-210ENST00000539013 SP7Q8TDD2 431 aaPredicted RBP11.59□□□□□ -0.55
KNTC1-210ENST00000539013 SPDYE4A6NLX3 237 aa11.56□□□□□ -0.56
KNTC1-210ENST00000539013 STAG3Q9UJ98 1225 aa11.52□□□□□ -0.57
KNTC1-210ENST00000539013 CHADLQ6NUI6 762 aa11.45□□□□□ -0.58
KNTC1-210ENST00000539013 C19orf67A6NJJ6 358 aa11.44□□□□□ -0.58
KNTC1-210ENST00000539013 EVX2Q03828 476 aa11.39□□□□□ -0.59
KNTC1-210ENST00000539013 FARP1Q9Y4F1 1045 aaPredicted RBP11.37□□□□□ -0.59
KNTC1-210ENST00000539013 PROM2Q8N271 834 aa11.33□□□□□ -0.6
KNTC1-210ENST00000539013 CREBZFQ9NS37 354 aa11.3□□□□□ -0.6
KNTC1-210ENST00000539013 CD44P16070 742 aaKnown RBP11.26□□□□□ -0.61
KNTC1-210ENST00000539013 CLCN6P51797 869 aa11.24□□□□□ -0.61
KNTC1-210ENST00000539013 GABBR2O75899 941 aa11.22□□□□□ -0.61
KNTC1-210ENST00000539013 NPM1P06748 294 aaKnown RBP eCLIP11.18□□□□□ -0.62
KNTC1-210ENST00000539013 PAK3O75914 559 aaPredicted RBP11.12□□□□□ -0.63
KNTC1-210ENST00000539013 MNX1P50219 401 aaPredicted RBP11.12□□□□□ -0.63
KNTC1-210ENST00000539013 ZNF579Q8NAF0 562 aaKnown RBP11.12□□□□□ -0.63
KNTC1-210ENST00000539013 ZRANB1Q9UGI0 708 aa11.12□□□□□ -0.63
KNTC1-210ENST00000539013 PLEKHG5O94827 1062 aa11.08□□□□□ -0.64
KNTC1-210ENST00000539013 FKBP8Q14318 412 aa11.07□□□□□ -0.64
KNTC1-210ENST00000539013 MIER1Q8N108 512 aa11.01□□□□□ -0.65
KNTC1-210ENST00000539013 DCBLD2Q96PD2 775 aa10.96□□□□□ -0.65
KNTC1-210ENST00000539013 ZBTB47Q9UFB7 747 aaPredicted RBP10.95□□□□□ -0.66
KNTC1-210ENST00000539013 POTEIP0CG38 1075 aa10.94□□□□□ -0.66
KNTC1-210ENST00000539013 PLCD3Q8N3E9 789 aa10.94□□□□□ -0.66
KNTC1-210ENST00000539013 PHF12Q96QT6 1004 aa10.92□□□□□ -0.66
KNTC1-210ENST00000539013 FBXO3Q9UK99 471 aa10.92□□□□□ -0.66
KNTC1-210ENST00000539013 GALR2O43603 387 aaPredicted RBP10.91□□□□□ -0.66
KNTC1-210ENST00000539013 TSPYL2Q9H2G4 693 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms