RNA–Protein interactions for RNA: ENST00000537695.5

GTF2H3-204, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 4

Gene GTF2H3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-204ENST00000537695 AEBP2Q6ZN18 517 aaPredicted RBP24.98■■□□□ 1.59
GTF2H3-204ENST00000537695 CHIC1Q5VXU3 224 aa23.94■■□□□ 1.42
GTF2H3-204ENST00000537695 SENP3Q9H4L4 574 aaPredicted RBP21.34■■□□□ 1.01
GTF2H3-204ENST00000537695 PHF23Q9BUL5 403 aaPredicted RBP21.08■□□□□ 0.97
GTF2H3-204ENST00000537695 FOXD1Q16676 465 aa19.82■□□□□ 0.76
GTF2H3-204ENST00000537695 PLPPR3Q6T4P5 718 aa19.26■□□□□ 0.67
GTF2H3-204ENST00000537695 PPP6R1Q9UPN7 881 aa18.68■□□□□ 0.58
GTF2H3-204ENST00000537695 ADRA2BP18089 450 aa18.65■□□□□ 0.58
GTF2H3-204ENST00000537695 PIAS4Q8N2W9 510 aaPredicted RBP18.61■□□□□ 0.57
GTF2H3-204ENST00000537695 MSH5O43196 834 aa18.53■□□□□ 0.56
GTF2H3-204ENST00000537695 POTEDQ86YR6 584 aa17.71■□□□□ 0.43
GTF2H3-204ENST00000537695 SCAF1Q9H7N4 1312 aaKnown RBP17.15■□□□□ 0.34
GTF2H3-204ENST00000537695 MAPK8IP2Q13387 824 aaPredicted RBP17.06■□□□□ 0.32
GTF2H3-204ENST00000537695 DMRT2Q9Y5R5 561 aa16.93■□□□□ 0.3
GTF2H3-204ENST00000537695 PPP4R3CPQ6ZMV5 832 aa16.89■□□□□ 0.29
GTF2H3-204ENST00000537695 CNKSR2Q8WXI2 1034 aa16.55■□□□□ 0.24
GTF2H3-204ENST00000537695 HOXD11P31277 338 aaPredicted RBP16.38■□□□□ 0.21
GTF2H3-204ENST00000537695 NCBP3Q53F19 620 aaKnown RBP16.35■□□□□ 0.21
GTF2H3-204ENST00000537695 RNF216Q9NWF9 866 aaPredicted RBP16.34■□□□□ 0.21
GTF2H3-204ENST00000537695 DCAF8L1A6NGE4 600 aa16.27■□□□□ 0.2
GTF2H3-204ENST00000537695 NPM3O75607 178 aaKnown RBP16.05■□□□□ 0.16
GTF2H3-204ENST00000537695 KCNA4P22459 653 aa15.9■□□□□ 0.14
GTF2H3-204ENST00000537695 DNAJC5BQ9UF47 199 aa15.81■□□□□ 0.12
GTF2H3-204ENST00000537695 RNF39Q9H2S5 420 aa15.8■□□□□ 0.12
GTF2H3-204ENST00000537695 CACNB1Q02641 598 aaPredicted RBP15.79■□□□□ 0.12
GTF2H3-204ENST00000537695 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.66■□□□□ 0.1
GTF2H3-204ENST00000537695 C1QBPQ07021 282 aaKnown RBP15.61■□□□□ 0.09
GTF2H3-204ENST00000537695 U3KPZ7 1027 aaPredicted RBP15.29■□□□□ 0.04
GTF2H3-204ENST00000537695 SLC4A2P04920 1241 aa15.25■□□□□ 0.03
GTF2H3-204ENST00000537695 SLC4A1APQ9BWU0 796 aaKnown RBP15.09■□□□□ 0.01
GTF2H3-204ENST00000537695 CAPN15O75808 1086 aa15.03■□□□□ -0
GTF2H3-204ENST00000537695 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.01□□□□□ -0.01
GTF2H3-204ENST00000537695 HNRNPUL2Q1KMD3 747 aaKnown RBP15.01□□□□□ -0.01
GTF2H3-204ENST00000537695 SPINK5Q9NQ38 1064 aaPredicted RBP15.01□□□□□ -0.01
GTF2H3-204ENST00000537695 APLP2Q06481 763 aa14.98□□□□□ -0.01
GTF2H3-204ENST00000537695 SAMD1Q6SPF0 538 aaPredicted RBP14.91□□□□□ -0.02
GTF2H3-204ENST00000537695 MYCNP04198 464 aaPredicted RBP14.86□□□□□ -0.03
GTF2H3-204ENST00000537695 DSG3P32926 999 aa14.86□□□□□ -0.03
GTF2H3-204ENST00000537695 TRHP20396 242 aaPredicted RBP14.84□□□□□ -0.03
GTF2H3-204ENST00000537695 ZNF219Q9P2Y4 722 aaPredicted RBP14.82□□□□□ -0.04
GTF2H3-204ENST00000537695 FOXD4L1Q9NU39 408 aa14.81□□□□□ -0.04
GTF2H3-204ENST00000537695 ABCB7O75027 752 aa14.67□□□□□ -0.06
GTF2H3-204ENST00000537695 ZBTB22O15209 634 aa14.59□□□□□ -0.07
GTF2H3-204ENST00000537695 POLA2Q14181 598 aa14.47□□□□□ -0.09
GTF2H3-204ENST00000537695 ATF5Q9Y2D1 282 aaPredicted RBP14.46□□□□□ -0.09
GTF2H3-204ENST00000537695 ATXN8OSP0DMR3 200 aa14.36□□□□□ -0.11
GTF2H3-204ENST00000537695 RBM42Q9BTD8 480 aaKnown RBP14.22□□□□□ -0.13
GTF2H3-204ENST00000537695 ZBTB12Q9Y330 459 aaPredicted RBP14.22□□□□□ -0.13
GTF2H3-204ENST00000537695 CSRNP3Q8WYN3 585 aa14.13□□□□□ -0.15
GTF2H3-204ENST00000537695 EHMT2Q96KQ7 1210 aa14.07□□□□□ -0.16
GTF2H3-204ENST00000537695 OSCARQ8IYS5 282 aa13.98□□□□□ -0.17
GTF2H3-204ENST00000537695 FBLN2P98095 1184 aa13.96□□□□□ -0.17
GTF2H3-204ENST00000537695 POTEHQ6S545 545 aa13.94□□□□□ -0.18
GTF2H3-204ENST00000537695 AKT1S1Q96B36 256 aa13.93□□□□□ -0.18
GTF2H3-204ENST00000537695 MKRN4PQ13434 485 aaPredicted RBP13.8□□□□□ -0.2
GTF2H3-204ENST00000537695 CHRDL2Q6WN34 429 aa13.8□□□□□ -0.2
GTF2H3-204ENST00000537695 SPDYE2BA6NHP3 402 aa13.78□□□□□ -0.2
GTF2H3-204ENST00000537695 SPDYE6P0CI01 402 aa13.78□□□□□ -0.2
GTF2H3-204ENST00000537695 SPDYE2Q495Y8 402 aa13.78□□□□□ -0.2
GTF2H3-204ENST00000537695 REM2Q8IYK8 340 aaPredicted RBP13.78□□□□□ -0.2
GTF2H3-204ENST00000537695 ZNF692Q9BU19 519 aaPredicted RBP13.66□□□□□ -0.22
GTF2H3-204ENST00000537695 PITPNM1O00562 1244 aa13.6□□□□□ -0.23
GTF2H3-204ENST00000537695 SSUH2Q9Y2M2 353 aa13.58□□□□□ -0.24
GTF2H3-204ENST00000537695 PIP4P2Q8N4L2 257 aa13.51□□□□□ -0.25
GTF2H3-204ENST00000537695 SPDYE1Q8NFV5 336 aaPredicted RBP13.5□□□□□ -0.25
GTF2H3-204ENST00000537695 CLEC11AQ9Y240 323 aa13.47□□□□□ -0.25
GTF2H3-204ENST00000537695 FXR2P51116 673 aaKnown RBP eCLIP13.46□□□□□ -0.25
GTF2H3-204ENST00000537695 PABPN1Q86U42 306 aaKnown RBP eCLIP13.45□□□□□ -0.26
GTF2H3-204ENST00000537695 SPDYE4A6NLX3 237 aa13.3□□□□□ -0.28
GTF2H3-204ENST00000537695 PRR29P0C7W0 189 aa13.29□□□□□ -0.28
GTF2H3-204ENST00000537695 PRKAR2AP13861 404 aaKnown RBP13.28□□□□□ -0.28
GTF2H3-204ENST00000537695 HAX1O00165 279 aa13.25□□□□□ -0.29
GTF2H3-204ENST00000537695 SP7Q8TDD2 431 aaPredicted RBP13.16□□□□□ -0.3
GTF2H3-204ENST00000537695 STAG3Q9UJ98 1225 aa13.16□□□□□ -0.3
GTF2H3-204ENST00000537695 CHADLQ6NUI6 762 aa13.15□□□□□ -0.3
GTF2H3-204ENST00000537695 EVX2Q03828 476 aa13.03□□□□□ -0.32
GTF2H3-204ENST00000537695 C19orf67A6NJJ6 358 aa13.02□□□□□ -0.33
GTF2H3-204ENST00000537695 FARP1Q9Y4F1 1045 aaPredicted RBP13□□□□□ -0.33
GTF2H3-204ENST00000537695 PROM2Q8N271 834 aa12.96□□□□□ -0.33
GTF2H3-204ENST00000537695 CREBZFQ9NS37 354 aa12.96□□□□□ -0.33
GTF2H3-204ENST00000537695 CD44P16070 742 aaKnown RBP12.87□□□□□ -0.35
GTF2H3-204ENST00000537695 FKBP8Q14318 412 aa12.83□□□□□ -0.36
GTF2H3-204ENST00000537695 GABBR2O75899 941 aa12.79□□□□□ -0.36
GTF2H3-204ENST00000537695 NPM1P06748 294 aaKnown RBP eCLIP12.79□□□□□ -0.36
GTF2H3-204ENST00000537695 MNX1P50219 401 aaPredicted RBP12.73□□□□□ -0.37
GTF2H3-204ENST00000537695 ZRANB1Q9UGI0 708 aa12.73□□□□□ -0.37
GTF2H3-204ENST00000537695 CLCN6P51797 869 aa12.72□□□□□ -0.37
GTF2H3-204ENST00000537695 PAK3O75914 559 aaPredicted RBP12.71□□□□□ -0.37
GTF2H3-204ENST00000537695 PLEKHG5O94827 1062 aa12.71□□□□□ -0.37
GTF2H3-204ENST00000537695 MIER1Q8N108 512 aa12.69□□□□□ -0.38
GTF2H3-204ENST00000537695 ZNF579Q8NAF0 562 aaKnown RBP12.67□□□□□ -0.38
GTF2H3-204ENST00000537695 PLCD3Q8N3E9 789 aa12.62□□□□□ -0.39
GTF2H3-204ENST00000537695 FBXO3Q9UK99 471 aa12.56□□□□□ -0.4
GTF2H3-204ENST00000537695 DCBLD2Q96PD2 775 aa12.53□□□□□ -0.4
GTF2H3-204ENST00000537695 PHF12Q96QT6 1004 aa12.53□□□□□ -0.4
GTF2H3-204ENST00000537695 TSPYL2Q9H2G4 693 aaPredicted RBP12.53□□□□□ -0.4
GTF2H3-204ENST00000537695 ZBTB47Q9UFB7 747 aaPredicted RBP12.53□□□□□ -0.4
GTF2H3-204ENST00000537695 GALR2O43603 387 aaPredicted RBP12.49□□□□□ -0.41
GTF2H3-204ENST00000537695 POTEIP0CG38 1075 aa12.48□□□□□ -0.41
GTF2H3-204ENST00000537695 RASEFQ8IZ41 740 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms