RNA–Protein interactions for RNA: ENST00000536375.5

GTF2H3-202, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-202ENST00000536375 AEBP2Q6ZN18 517 aaPredicted RBP21.55■■□□□ 1.04
GTF2H3-202ENST00000536375 CHIC1Q5VXU3 224 aa20.29■□□□□ 0.84
GTF2H3-202ENST00000536375 SENP3Q9H4L4 574 aaPredicted RBP18.21■□□□□ 0.51
GTF2H3-202ENST00000536375 PHF23Q9BUL5 403 aaPredicted RBP18.04■□□□□ 0.48
GTF2H3-202ENST00000536375 FOXD1Q16676 465 aa17.1■□□□□ 0.33
GTF2H3-202ENST00000536375 PLPPR3Q6T4P5 718 aa16.38■□□□□ 0.21
GTF2H3-202ENST00000536375 PPP6R1Q9UPN7 881 aa16■□□□□ 0.15
GTF2H3-202ENST00000536375 ADRA2BP18089 450 aa15.9■□□□□ 0.14
GTF2H3-202ENST00000536375 PIAS4Q8N2W9 510 aaPredicted RBP15.9■□□□□ 0.14
GTF2H3-202ENST00000536375 MSH5O43196 834 aa15.89■□□□□ 0.13
GTF2H3-202ENST00000536375 POTEDQ86YR6 584 aa15.76■□□□□ 0.11
GTF2H3-202ENST00000536375 MAPK8IP2Q13387 824 aaPredicted RBP14.66□□□□□ -0.06
GTF2H3-202ENST00000536375 SCAF1Q9H7N4 1312 aaKnown RBP14.49□□□□□ -0.09
GTF2H3-202ENST00000536375 DMRT2Q9Y5R5 561 aa14.48□□□□□ -0.09
GTF2H3-202ENST00000536375 PPP4R3CPQ6ZMV5 832 aa14.4□□□□□ -0.1
GTF2H3-202ENST00000536375 CNKSR2Q8WXI2 1034 aa14.05□□□□□ -0.16
GTF2H3-202ENST00000536375 NCBP3Q53F19 620 aaKnown RBP13.97□□□□□ -0.17
GTF2H3-202ENST00000536375 HOXD11P31277 338 aaPredicted RBP13.92□□□□□ -0.18
GTF2H3-202ENST00000536375 DCAF8L1A6NGE4 600 aa13.85□□□□□ -0.19
GTF2H3-202ENST00000536375 RNF216Q9NWF9 866 aaPredicted RBP13.83□□□□□ -0.2
GTF2H3-202ENST00000536375 KCNA4P22459 653 aa13.74□□□□□ -0.21
GTF2H3-202ENST00000536375 NPM3O75607 178 aaKnown RBP13.72□□□□□ -0.21
GTF2H3-202ENST00000536375 CACNB1Q02641 598 aaPredicted RBP13.72□□□□□ -0.21
GTF2H3-202ENST00000536375 RNF39Q9H2S5 420 aa13.64□□□□□ -0.23
GTF2H3-202ENST00000536375 NISCHQ9Y2I1 1504 aa13.59□□□□□ -0.23
GTF2H3-202ENST00000536375 DNAJC5BQ9UF47 199 aa13.37□□□□□ -0.27
GTF2H3-202ENST00000536375 C1QBPQ07021 282 aaKnown RBP13.36□□□□□ -0.27
GTF2H3-202ENST00000536375 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.26□□□□□ -0.29
GTF2H3-202ENST00000536375 SLC4A1APQ9BWU0 796 aaKnown RBP13.07□□□□□ -0.32
GTF2H3-202ENST00000536375 U3KPZ7 1027 aaPredicted RBP13.03□□□□□ -0.32
GTF2H3-202ENST00000536375 SLC4A2P04920 1241 aa12.99□□□□□ -0.33
GTF2H3-202ENST00000536375 SPINK5Q9NQ38 1064 aaPredicted RBP12.88□□□□□ -0.35
GTF2H3-202ENST00000536375 CAPN15O75808 1086 aa12.76□□□□□ -0.37
GTF2H3-202ENST00000536375 DSG3P32926 999 aa12.76□□□□□ -0.37
GTF2H3-202ENST00000536375 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.74□□□□□ -0.37
GTF2H3-202ENST00000536375 HNRNPUL2Q1KMD3 747 aaKnown RBP12.74□□□□□ -0.37
GTF2H3-202ENST00000536375 FOXD4L1Q9NU39 408 aa12.74□□□□□ -0.37
GTF2H3-202ENST00000536375 MYCNP04198 464 aaPredicted RBP12.71□□□□□ -0.37
GTF2H3-202ENST00000536375 APLP2Q06481 763 aa12.69□□□□□ -0.38
GTF2H3-202ENST00000536375 SAMD1Q6SPF0 538 aaPredicted RBP12.67□□□□□ -0.38
GTF2H3-202ENST00000536375 ZBTB22O15209 634 aa12.61□□□□□ -0.39
GTF2H3-202ENST00000536375 TRHP20396 242 aaPredicted RBP12.57□□□□□ -0.4
GTF2H3-202ENST00000536375 ABCB7O75027 752 aa12.54□□□□□ -0.4
GTF2H3-202ENST00000536375 ZNF219Q9P2Y4 722 aaPredicted RBP12.53□□□□□ -0.4
GTF2H3-202ENST00000536375 ABCC9O60706 1549 aa12.47□□□□□ -0.41
GTF2H3-202ENST00000536375 EHMT2Q96KQ7 1210 aa12.41□□□□□ -0.42
GTF2H3-202ENST00000536375 ATF5Q9Y2D1 282 aaPredicted RBP12.36□□□□□ -0.43
GTF2H3-202ENST00000536375 CSRNP3Q8WYN3 585 aa12.33□□□□□ -0.44
GTF2H3-202ENST00000536375 ATXN8OSP0DMR3 200 aa12.3□□□□□ -0.44
GTF2H3-202ENST00000536375 POTEHQ6S545 545 aa12.3□□□□□ -0.44
GTF2H3-202ENST00000536375 POLA2Q14181 598 aa12.27□□□□□ -0.45
GTF2H3-202ENST00000536375 CCDC180Q9P1Z9 1646 aa12.19□□□□□ -0.46
GTF2H3-202ENST00000536375 ZBTB12Q9Y330 459 aaPredicted RBP12.07□□□□□ -0.48
GTF2H3-202ENST00000536375 RBM42Q9BTD8 480 aaKnown RBP12.04□□□□□ -0.48
GTF2H3-202ENST00000536375 FBLN2P98095 1184 aa11.93□□□□□ -0.5
GTF2H3-202ENST00000536375 CHRDL2Q6WN34 429 aa11.9□□□□□ -0.5
GTF2H3-202ENST00000536375 OSCARQ8IYS5 282 aa11.87□□□□□ -0.51
GTF2H3-202ENST00000536375 AKT1S1Q96B36 256 aa11.8□□□□□ -0.52
GTF2H3-202ENST00000536375 MKRN4PQ13434 485 aaPredicted RBP11.79□□□□□ -0.52
GTF2H3-202ENST00000536375 REM2Q8IYK8 340 aaPredicted RBP11.75□□□□□ -0.53
GTF2H3-202ENST00000536375 RB1CC1Q8TDY2 1594 aa11.73□□□□□ -0.53
GTF2H3-202ENST00000536375 SPDYE2BA6NHP3 402 aa11.7□□□□□ -0.54
GTF2H3-202ENST00000536375 SPDYE6P0CI01 402 aa11.7□□□□□ -0.54
GTF2H3-202ENST00000536375 SPDYE2Q495Y8 402 aa11.7□□□□□ -0.54
GTF2H3-202ENST00000536375 PITPNM1O00562 1244 aa11.65□□□□□ -0.54
GTF2H3-202ENST00000536375 PABPN1Q86U42 306 aaKnown RBP eCLIP11.64□□□□□ -0.55
GTF2H3-202ENST00000536375 PIP4P2Q8N4L2 257 aa11.64□□□□□ -0.55
GTF2H3-202ENST00000536375 ZNF692Q9BU19 519 aaPredicted RBP11.63□□□□□ -0.55
GTF2H3-202ENST00000536375 NACADO15069 1562 aa11.62□□□□□ -0.55
GTF2H3-202ENST00000536375 DCAF8L2P0C7V8 631 aa11.58□□□□□ -0.56
GTF2H3-202ENST00000536375 FXR2P51116 673 aaKnown RBP eCLIP11.55□□□□□ -0.56
GTF2H3-202ENST00000536375 SSUH2Q9Y2M2 353 aa11.54□□□□□ -0.56
GTF2H3-202ENST00000536375 SP7Q8TDD2 431 aaPredicted RBP11.48□□□□□ -0.57
GTF2H3-202ENST00000536375 SPDYE4A6NLX3 237 aa11.46□□□□□ -0.57
GTF2H3-202ENST00000536375 BICRAQ9NZM4 1560 aa11.45□□□□□ -0.58
GTF2H3-202ENST00000536375 SPDYE1Q8NFV5 336 aaPredicted RBP11.44□□□□□ -0.58
GTF2H3-202ENST00000536375 CLEC11AQ9Y240 323 aa11.44□□□□□ -0.58
GTF2H3-202ENST00000536375 MYO15BQ96JP2 1530 aa11.41□□□□□ -0.58
GTF2H3-202ENST00000536375 UNC13AQ9UPW8 1703 aa11.41□□□□□ -0.58
GTF2H3-202ENST00000536375 EVX2Q03828 476 aa11.4□□□□□ -0.58
GTF2H3-202ENST00000536375 HAX1O00165 279 aa11.38□□□□□ -0.59
GTF2H3-202ENST00000536375 PRKAR2AP13861 404 aaKnown RBP11.31□□□□□ -0.6
GTF2H3-202ENST00000536375 PRR29P0C7W0 189 aa11.27□□□□□ -0.61
GTF2H3-202ENST00000536375 CECR2Q9BXF3 1484 aa11.25□□□□□ -0.61
GTF2H3-202ENST00000536375 CHADLQ6NUI6 762 aa11.25□□□□□ -0.61
GTF2H3-202ENST00000536375 ZCCHC6Q5VYS8 1495 aaKnown RBP11.23□□□□□ -0.61
GTF2H3-202ENST00000536375 SHROOM4Q9ULL8 1493 aa11.23□□□□□ -0.61
GTF2H3-202ENST00000536375 CC2D2AQ9P2K1 1620 aa11.23□□□□□ -0.61
GTF2H3-202ENST00000536375 FKBP8Q14318 412 aa11.22□□□□□ -0.61
GTF2H3-202ENST00000536375 STAG3Q9UJ98 1225 aa11.22□□□□□ -0.61
GTF2H3-202ENST00000536375 DCAF1Q9Y4B6 1507 aa11.2□□□□□ -0.62
GTF2H3-202ENST00000536375 C19orf67A6NJJ6 358 aa11.18□□□□□ -0.62
GTF2H3-202ENST00000536375 EIF4G1Q04637 1599 aaKnown RBP11.16□□□□□ -0.62
GTF2H3-202ENST00000536375 SCRIBQ14160 1630 aa11.15□□□□□ -0.62
GTF2H3-202ENST00000536375 PROM2Q8N271 834 aa11.14□□□□□ -0.63
GTF2H3-202ENST00000536375 DNAJC5Q9H3Z4 198 aa11.07□□□□□ -0.64
GTF2H3-202ENST00000536375 GABBR2O75899 941 aa11.04□□□□□ -0.64
GTF2H3-202ENST00000536375 CREBZFQ9NS37 354 aa11.01□□□□□ -0.65
GTF2H3-202ENST00000536375 FARP1Q9Y4F1 1045 aaPredicted RBP11□□□□□ -0.65
GTF2H3-202ENST00000536375 CD44P16070 742 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms