RNA–Protein interactions for RNA: ENST00000535270.5

POLE-207, Transcript of DNA polymerase epsilon, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLE, Length 6,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLE-207ENST00000535270 DCAF8L2P0C7V8 631 aa20.61■□□□□ 0.89
POLE-207ENST00000535270 NISCHQ9Y2I1 1504 aa19.44■□□□□ 0.7
POLE-207ENST00000535270 SUPT5HO00267 1087 aaKnown RBP19.43■□□□□ 0.7
POLE-207ENST00000535270 EHMT2Q96KQ7 1210 aa19.12■□□□□ 0.65
POLE-207ENST00000535270 PELP1Q8IZL8 1130 aaKnown RBP19.01■□□□□ 0.63
POLE-207ENST00000535270 SHROOM4Q9ULL8 1493 aa19■□□□□ 0.63
POLE-207ENST00000535270 APLP2Q06481 763 aa18.74■□□□□ 0.59
POLE-207ENST00000535270 FAM9AQ8IZU1 332 aaPredicted RBP18.6■□□□□ 0.57
POLE-207ENST00000535270 TTBK1Q5TCY1 1321 aaPredicted RBP18.45■□□□□ 0.54
POLE-207ENST00000535270 PCGF6Q9BYE7 350 aa18.39■□□□□ 0.54
POLE-207ENST00000535270 ZEB1P37275 1124 aaPredicted RBP18.36■□□□□ 0.53
POLE-207ENST00000535270 ERICH6Q7L0X2 663 aa18.33■□□□□ 0.52
POLE-207ENST00000535270 CENPBP07199 599 aaPredicted RBP18.31■□□□□ 0.52
POLE-207ENST00000535270 RANGAP1P46060 587 aaPredicted RBP18.26■□□□□ 0.51
POLE-207ENST00000535270 ATP1B4Q9UN42 357 aaPredicted RBP18.2■□□□□ 0.5
POLE-207ENST00000535270 CCER1Q8TC90 406 aaPredicted RBP18.16■□□□□ 0.5
POLE-207ENST00000535270 TRIM41Q8WV44 630 aa18.07■□□□□ 0.48
POLE-207ENST00000535270 MYT1Q01538 1121 aa17.98■□□□□ 0.47
POLE-207ENST00000535270 NEFLP07196 543 aa17.86■□□□□ 0.45
POLE-207ENST00000535270 UBTFP17480 764 aaKnown RBP17.83■□□□□ 0.45
POLE-207ENST00000535270 MYT1LQ9UL68 1186 aa17.74■□□□□ 0.43
POLE-207ENST00000535270 YTHDC1Q96MU7 727 aaKnown RBP17.71■□□□□ 0.43
POLE-207ENST00000535270 TRIM26Q12899 539 aaPredicted RBP17.71■□□□□ 0.43
POLE-207ENST00000535270 HRCP23327 699 aa17.59■□□□□ 0.41
POLE-207ENST00000535270 POLR3GLQ9BT43 218 aa17.56■□□□□ 0.4
POLE-207ENST00000535270 DAXXQ9UER7 740 aaPredicted RBP17.55■□□□□ 0.4
POLE-207ENST00000535270 CHIC1Q5VXU3 224 aa17.54■□□□□ 0.4
POLE-207ENST00000535270 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.5■□□□□ 0.39
POLE-207ENST00000535270 HNRNPUL2Q1KMD3 747 aaKnown RBP17.5■□□□□ 0.39
POLE-207ENST00000535270 PPARGC1BQ86YN6 1023 aaKnown RBP17.49■□□□□ 0.39
POLE-207ENST00000535270 CNGB1Q14028 1251 aaPredicted RBP17.43■□□□□ 0.38
POLE-207ENST00000535270 SLC4A1APQ9BWU0 796 aaKnown RBP17.39■□□□□ 0.37
POLE-207ENST00000535270 ITGAEP38570 1179 aa17.39■□□□□ 0.37
POLE-207ENST00000535270 LOC105371045A0A1W2PR82 267 aa17.27■□□□□ 0.35
POLE-207ENST00000535270 CLSPNQ9HAW4 1339 aa17.14■□□□□ 0.34
POLE-207ENST00000535270 DIEXFQ68CQ4 756 aaKnown RBP17.12■□□□□ 0.33
POLE-207ENST00000535270 ZNF316A6NFI3 1004 aaPredicted RBP17.08■□□□□ 0.33
POLE-207ENST00000535270 RTL5Q5HYW3 569 aaPredicted RBP16.99■□□□□ 0.31
POLE-207ENST00000535270 SLC24A1O60721 1099 aa16.93■□□□□ 0.3
POLE-207ENST00000535270 BCL11AQ9H165 835 aa16.87■□□□□ 0.29
POLE-207ENST00000535270 FAM50AQ14320 339 aaKnown RBP16.85■□□□□ 0.29
POLE-207ENST00000535270 ZBTB47Q9UFB7 747 aaPredicted RBP16.84■□□□□ 0.29
POLE-207ENST00000535270 TRIM52Q96A61 297 aa16.84■□□□□ 0.29
POLE-207ENST00000535270 GTF3C3Q9Y5Q9 886 aa16.8■□□□□ 0.28
POLE-207ENST00000535270 ANP32CO43423 234 aa16.77■□□□□ 0.27
POLE-207ENST00000535270 BCANQ96GW7 911 aa16.76■□□□□ 0.27
POLE-207ENST00000535270 NEUROD1Q13562 356 aa16.74■□□□□ 0.27
POLE-207ENST00000535270 ZNF326Q5BKZ1 582 aaKnown RBP16.73■□□□□ 0.27
POLE-207ENST00000535270 CDK11AQ9UQ88 783 aaPredicted RBP16.73■□□□□ 0.27
POLE-207ENST00000535270 CANXP27824 592 aaKnown RBP16.64■□□□□ 0.25
POLE-207ENST00000535270 FBLN2P98095 1184 aa16.62■□□□□ 0.25
POLE-207ENST00000535270 ACIN1Q9UKV3 1341 aaKnown RBP16.61■□□□□ 0.25
POLE-207ENST00000535270 NEFMP07197 916 aa16.6■□□□□ 0.25
POLE-207ENST00000535270 PLPPR3Q6T4P5 718 aa16.52■□□□□ 0.23
POLE-207ENST00000535270 ABCC9O60706 1549 aa16.49■□□□□ 0.23
POLE-207ENST00000535270 PABPN1Q86U42 306 aaKnown RBP eCLIP16.48■□□□□ 0.231e-6■■■■■ 30
POLE-207ENST00000535270 ANP32AP39687 249 aaKnown RBP16.46■□□□□ 0.23
POLE-207ENST00000535270 CSRNP3Q8WYN3 585 aa16.45■□□□□ 0.22
POLE-207ENST00000535270 ARID3CA6NKF2 412 aa16.41■□□□□ 0.22
POLE-207ENST00000535270 ESF1Q9H501 851 aaKnown RBP16.4■□□□□ 0.22
POLE-207ENST00000535270 DCAF1Q9Y4B6 1507 aa16.4■□□□□ 0.22
POLE-207ENST00000535270 ZNF777Q9ULD5 760 aaPredicted RBP16.33■□□□□ 0.2
POLE-207ENST00000535270 STAG3Q9UJ98 1225 aa16.31■□□□□ 0.2
POLE-207ENST00000535270 NPM2Q86SE8 214 aaKnown RBP16.3■□□□□ 0.2
POLE-207ENST00000535270 CHGAP10645 457 aaKnown RBP16.29■□□□□ 0.2
POLE-207ENST00000535270 FKBP8Q14318 412 aa16.29■□□□□ 0.2
POLE-207ENST00000535270 P3H3Q8IVL6 736 aa16.28■□□□□ 0.2
POLE-207ENST00000535270 TONSLQ96HA7 1378 aa16.27■□□□□ 0.2
POLE-207ENST00000535270 HSP90AA1P07900 732 aaKnown RBP16.27■□□□□ 0.2
POLE-207ENST00000535270 ANP32BQ92688 251 aaKnown RBP16.24■□□□□ 0.19
POLE-207ENST00000535270 A0A0G2JS52 829 aa16.24■□□□□ 0.19
POLE-207ENST00000535270 SCAF1Q9H7N4 1312 aaKnown RBP16.21■□□□□ 0.19
POLE-207ENST00000535270 HNRNPUQ00839 825 aaKnown RBP eCLIP16.19■□□□□ 0.183e-6■□□□□ 10.4
POLE-207ENST00000535270 UPF2Q9HAU5 1272 aaKnown RBP16.16■□□□□ 0.18
POLE-207ENST00000535270 DDX10Q13206 875 aaKnown RBP16.14■□□□□ 0.18
POLE-207ENST00000535270 EIF5BO60841 1220 aaKnown RBP16.12■□□□□ 0.17
POLE-207ENST00000535270 ZCCHC6Q5VYS8 1495 aaKnown RBP16.11■□□□□ 0.17
POLE-207ENST00000535270 FAM9BQ8IZU0 186 aa16.11■□□□□ 0.17
POLE-207ENST00000535270 SCRIBQ14160 1630 aa16.1■□□□□ 0.17
POLE-207ENST00000535270 PLEKHG5O94827 1062 aa16.1■□□□□ 0.17
POLE-207ENST00000535270 NPM1P06748 294 aaKnown RBP eCLIP16.09■□□□□ 0.17
POLE-207ENST00000535270 SALL2Q9Y467 1007 aaPredicted RBP16.08■□□□□ 0.16
POLE-207ENST00000535270 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.07■□□□□ 0.16
POLE-207ENST00000535270 CCDC136Q96JN2 1154 aa16.07■□□□□ 0.16
POLE-207ENST00000535270 CDK11BP21127 795 aaKnown RBP16.05■□□□□ 0.16
POLE-207ENST00000535270 TMC1Q8TDI8 760 aa16.04■□□□□ 0.16
POLE-207ENST00000535270 ZBTB7CA1YPR0 619 aa16.03■□□□□ 0.16
POLE-207ENST00000535270 GLIPR1L2Q4G1C9 344 aa16■□□□□ 0.15
POLE-207ENST00000535270 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.99■□□□□ 0.156e-7■■■□□ 16.7
POLE-207ENST00000535270 ARXQ96QS3 562 aa15.98■□□□□ 0.15
POLE-207ENST00000535270 MRS2Q9HD23 443 aa15.97■□□□□ 0.15
POLE-207ENST00000535270 MIER1Q8N108 512 aa15.97■□□□□ 0.15
POLE-207ENST00000535270 SENP3Q9H4L4 574 aaPredicted RBP15.97■□□□□ 0.15
POLE-207ENST00000535270 WDR43Q15061 677 aaKnown RBP eCLIP15.96■□□□□ 0.15
POLE-207ENST00000535270 NBR1Q14596 966 aa15.94■□□□□ 0.14
POLE-207ENST00000535270 C14orf37Q86TY3 774 aa15.94■□□□□ 0.14
POLE-207ENST00000535270 CHIC2Q9UKJ5 165 aa15.92■□□□□ 0.14
POLE-207ENST00000535270 CLIP1P30622 1438 aa15.91■□□□□ 0.14
POLE-207ENST00000535270 TULP1O00294 542 aaPredicted RBP15.9■□□□□ 0.14
POLE-207ENST00000535270 MTUS2Q5JR59 1369 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms