RNA–Protein interactions for RNA: ENST00000534140.2

PHLDB1-222, Transcript of pleckstrin homology like domain family B member 1, humanhuman

TSL 2

Gene PHLDB1, Length 3,128 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDB1-222ENST00000534140 NISCHQ9Y2I1 1504 aa31.59■■■□□ 2.65
PHLDB1-222ENST00000534140 SHROOM4Q9ULL8 1493 aa27.81■■■□□ 2.04
PHLDB1-222ENST00000534140 DCAF8L2P0C7V8 631 aa27.43■■□□□ 1.98
PHLDB1-222ENST00000534140 SUPT5HO00267 1087 aaKnown RBP27.21■■□□□ 1.95
PHLDB1-222ENST00000534140 ZCCHC6Q5VYS8 1495 aaKnown RBP26.6■■□□□ 1.85
PHLDB1-222ENST00000534140 CCDC180Q9P1Z9 1646 aa26.47■■□□□ 1.83
PHLDB1-222ENST00000534140 CHIC1Q5VXU3 224 aa25.94■■□□□ 1.74
PHLDB1-222ENST00000534140 MYO15BQ96JP2 1530 aa25.79■■□□□ 1.72
PHLDB1-222ENST00000534140 ABCC9O60706 1549 aa25.62■■□□□ 1.69
PHLDB1-222ENST00000534140 LOC105371045A0A1W2PR82 267 aa25.56■■□□□ 1.68
PHLDB1-222ENST00000534140 SCRIBQ14160 1630 aa25.52■■□□□ 1.68
PHLDB1-222ENST00000534140 EHMT2Q96KQ7 1210 aa25.48■■□□□ 1.67
PHLDB1-222ENST00000534140 DCAF1Q9Y4B6 1507 aa25.45■■□□□ 1.67
PHLDB1-222ENST00000534140 PCGF6Q9BYE7 350 aa25.35■■□□□ 1.65
PHLDB1-222ENST00000534140 FAM9AQ8IZU1 332 aaPredicted RBP25.31■■□□□ 1.64
PHLDB1-222ENST00000534140 RSF1Q96T23 1441 aaPredicted RBP25.13■■□□□ 1.61
PHLDB1-222ENST00000534140 TRIM41Q8WV44 630 aa25.06■■□□□ 1.6
PHLDB1-222ENST00000534140 CECR2Q9BXF3 1484 aa25.02■■□□□ 1.6
PHLDB1-222ENST00000534140 PPARGC1BQ86YN6 1023 aaKnown RBP24.89■■□□□ 1.57
PHLDB1-222ENST00000534140 RB1CC1Q8TDY2 1594 aa24.89■■□□□ 1.57
PHLDB1-222ENST00000534140 HRCP23327 699 aa24.82■■□□□ 1.56
PHLDB1-222ENST00000534140 PABPN1Q86U42 306 aaKnown RBP eCLIP24.79■■□□□ 1.56
PHLDB1-222ENST00000534140 MROH2BQ7Z745 1585 aa24.76■■□□□ 1.55
PHLDB1-222ENST00000534140 NACADO15069 1562 aa24.71■■□□□ 1.55
PHLDB1-222ENST00000534140 WIZO95785 1651 aa24.62■■□□□ 1.53
PHLDB1-222ENST00000534140 TTBK1Q5TCY1 1321 aaPredicted RBP24.52■■□□□ 1.52
PHLDB1-222ENST00000534140 TRIM26Q12899 539 aaPredicted RBP24.46■■□□□ 1.51
PHLDB1-222ENST00000534140 PELP1Q8IZL8 1130 aaKnown RBP24.21■■□□□ 1.47
PHLDB1-222ENST00000534140 ABCC8Q09428 1581 aa24.21■■□□□ 1.47
PHLDB1-222ENST00000534140 BAZ1AQ9NRL2 1556 aaPredicted RBP24.2■■□□□ 1.46
PHLDB1-222ENST00000534140 CCDC88BA6NC98 1476 aa24.13■■□□□ 1.45
PHLDB1-222ENST00000534140 RANGAP1P46060 587 aaPredicted RBP24.1■■□□□ 1.45
PHLDB1-222ENST00000534140 UNC13AQ9UPW8 1703 aa24.08■■□□□ 1.45
PHLDB1-222ENST00000534140 SMARCA4P51532 1647 aa24.05■■□□□ 1.44
PHLDB1-222ENST00000534140 UBTFP17480 764 aaKnown RBP24.03■■□□□ 1.44
PHLDB1-222ENST00000534140 SOGA1O94964 1423 aa23.99■■□□□ 1.43
PHLDB1-222ENST00000534140 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.97■■□□□ 1.43
PHLDB1-222ENST00000534140 TOP2AP11388 1531 aaKnown RBP23.95■■□□□ 1.42
PHLDB1-222ENST00000534140 RUSC2Q8N2Y8 1516 aa23.93■■□□□ 1.42
PHLDB1-222ENST00000534140 SMARCA2P51531 1590 aa23.91■■□□□ 1.42
PHLDB1-222ENST00000534140 BICRAQ9NZM4 1560 aa23.87■■□□□ 1.41
PHLDB1-222ENST00000534140 CSRNP3Q8WYN3 585 aa23.81■■□□□ 1.4
PHLDB1-222ENST00000534140 EIF4G1Q04637 1599 aaKnown RBP23.79■■□□□ 1.4
PHLDB1-222ENST00000534140 CCER1Q8TC90 406 aaPredicted RBP23.76■■□□□ 1.39
PHLDB1-222ENST00000534140 CEP162Q5TB80 1403 aa23.67■■□□□ 1.38
PHLDB1-222ENST00000534140 WRNQ14191 1432 aaPredicted RBP eCLIP23.65■■□□□ 1.38
PHLDB1-222ENST00000534140 BAZ1BQ9UIG0 1483 aaKnown RBP23.6■■□□□ 1.37
PHLDB1-222ENST00000534140 ATAD2BQ9ULI0 1458 aa23.6■■□□□ 1.37
PHLDB1-222ENST00000534140 ZEB1P37275 1124 aaPredicted RBP23.6■■□□□ 1.37
PHLDB1-222ENST00000534140 MYT1Q01538 1121 aa23.6■■□□□ 1.37
PHLDB1-222ENST00000534140 HNRNPUL2Q1KMD3 747 aaKnown RBP23.54■■□□□ 1.36
PHLDB1-222ENST00000534140 SYNJ1O43426 1573 aa23.47■■□□□ 1.35
PHLDB1-222ENST00000534140 TNIKQ9UKE5 1360 aa23.46■■□□□ 1.35
PHLDB1-222ENST00000534140 GOLGA3Q08378 1498 aa23.36■■□□□ 1.33
PHLDB1-222ENST00000534140 APLP2Q06481 763 aa23.32■■□□□ 1.32
PHLDB1-222ENST00000534140 RAPGEF2Q9Y4G8 1499 aa23.32■■□□□ 1.32
PHLDB1-222ENST00000534140 PEG3Q9GZU2 1588 aa23.29■■□□□ 1.32
PHLDB1-222ENST00000534140 CLIP1P30622 1438 aa23.28■■□□□ 1.32
PHLDB1-222ENST00000534140 EEA1Q15075 1411 aa23.27■■□□□ 1.32
PHLDB1-222ENST00000534140 CEP164Q9UPV0 1460 aa23.21■■□□□ 1.31
PHLDB1-222ENST00000534140 ITGAEP38570 1179 aa23.15■■□□□ 1.3
PHLDB1-222ENST00000534140 DIEXFQ68CQ4 756 aaKnown RBP23.08■■□□□ 1.29
PHLDB1-222ENST00000534140 KANK4Q5T7N3 995 aaPredicted RBP23.07■■□□□ 1.28
PHLDB1-222ENST00000534140 ATP1B4Q9UN42 357 aaPredicted RBP23.06■■□□□ 1.28
PHLDB1-222ENST00000534140 P3H3Q8IVL6 736 aa23.06■■□□□ 1.28
PHLDB1-222ENST00000534140 NCAPD3P42695 1498 aa23.01■■□□□ 1.27
PHLDB1-222ENST00000534140 VPS8Q8N3P4 1428 aa23■■□□□ 1.27
PHLDB1-222ENST00000534140 CUX1P39880 1505 aa23■■□□□ 1.27
PHLDB1-222ENST00000534140 YTHDC1Q96MU7 727 aaKnown RBP22.98■■□□□ 1.27
PHLDB1-222ENST00000534140 TOP2BQ02880 1626 aa22.97■■□□□ 1.27
PHLDB1-222ENST00000534140 SCAF1Q9H7N4 1312 aaKnown RBP22.97■■□□□ 1.27
PHLDB1-222ENST00000534140 KIF21BO75037 1637 aa22.95■■□□□ 1.26
PHLDB1-222ENST00000534140 DNAJC5BQ9UF47 199 aa22.92■■□□□ 1.26
PHLDB1-222ENST00000534140 KIF27Q86VH2 1401 aa22.88■■□□□ 1.25
PHLDB1-222ENST00000534140 CUX2O14529 1486 aa22.86■■□□□ 1.25
PHLDB1-222ENST00000534140 NEUROD1Q13562 356 aa22.86■■□□□ 1.25
PHLDB1-222ENST00000534140 CFTRP13569 1480 aa22.85■■□□□ 1.25
PHLDB1-222ENST00000534140 ARAP1Q96P48 1450 aa22.83■■□□□ 1.24
PHLDB1-222ENST00000534140 HMGXB3Q12766 1538 aa22.82■■□□□ 1.24
PHLDB1-222ENST00000534140 PRXQ9BXM0 1461 aa22.81■■□□□ 1.24
PHLDB1-222ENST00000534140 ZNF316A6NFI3 1004 aaPredicted RBP22.81■■□□□ 1.24
PHLDB1-222ENST00000534140 CADPSQ9ULU8 1353 aa22.78■■□□□ 1.24
PHLDB1-222ENST00000534140 BIVM-ERCC5R4GMW8 1640 aa22.75■■□□□ 1.23
PHLDB1-222ENST00000534140 NESP48681 1621 aa22.75■■□□□ 1.23
PHLDB1-222ENST00000534140 IGF1RP08069 1367 aa22.73■■□□□ 1.23
PHLDB1-222ENST00000534140 CC2D2AQ9P2K1 1620 aa22.7■■□□□ 1.22
PHLDB1-222ENST00000534140 MIER1Q8N108 512 aa22.7■■□□□ 1.22
PHLDB1-222ENST00000534140 FGD5Q6ZNL6 1462 aa22.69■■□□□ 1.22
PHLDB1-222ENST00000534140 CARMIL1Q5VZK9 1371 aa22.68■■□□□ 1.22
PHLDB1-222ENST00000534140 RAD54L2Q9Y4B4 1467 aa22.68■■□□□ 1.22
PHLDB1-222ENST00000534140 FAM50AQ14320 339 aaKnown RBP22.68■■□□□ 1.22
PHLDB1-222ENST00000534140 ACIN1Q9UKV3 1341 aaKnown RBP22.65■■□□□ 1.22
PHLDB1-222ENST00000534140 ARHGAP35Q9NRY4 1499 aa22.65■■□□□ 1.22
PHLDB1-222ENST00000534140 GTF3C3Q9Y5Q9 886 aa22.62■■□□□ 1.21
PHLDB1-222ENST00000534140 FANCD2Q9BXW9 1451 aa22.6■■□□□ 1.21
PHLDB1-222ENST00000534140 ERICH3Q5RHP9 1530 aa22.59■■□□□ 1.21
PHLDB1-222ENST00000534140 ARID3CA6NKF2 412 aa22.59■■□□□ 1.21
PHLDB1-222ENST00000534140 TDRD9Q8NDG6 1382 aaKnown RBP22.54■■□□□ 1.2
PHLDB1-222ENST00000534140 DHX57Q6P158 1386 aaKnown RBP22.52■■□□□ 1.2
PHLDB1-222ENST00000534140 CENPBP07199 599 aaPredicted RBP22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms