RNA–Protein interactions for RNA: ENST00000533839.5

FOXRED1-216, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 4

Gene FOXRED1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-216ENST00000533839 KIAA0586Q9BVV6 1533 aa16.19■□□□□ 0.18
FOXRED1-216ENST00000533839 CUL7Q14999 1698 aa16.18■□□□□ 0.18
FOXRED1-216ENST00000533839 FAM9AQ8IZU1 332 aaPredicted RBP16.14■□□□□ 0.17
FOXRED1-216ENST00000533839 SHROOM2Q13796 1616 aa16.12■□□□□ 0.17
FOXRED1-216ENST00000533839 CARMIL2Q6F5E8 1435 aa16.12■□□□□ 0.17
FOXRED1-216ENST00000533839 RAPGEF2Q9Y4G8 1499 aa16.11■□□□□ 0.17
FOXRED1-216ENST00000533839 ERCC6L2Q5T890 1561 aa16.09■□□□□ 0.17
FOXRED1-216ENST00000533839 PTPRGP23470 1445 aa16.08■□□□□ 0.16
FOXRED1-216ENST00000533839 CSRNP3Q8WYN3 585 aa16.07■□□□□ 0.16
FOXRED1-216ENST00000533839 TTBK1Q5TCY1 1321 aaPredicted RBP16.06■□□□□ 0.16
FOXRED1-216ENST00000533839 RUSC2Q8N2Y8 1516 aa16.05■□□□□ 0.16
FOXRED1-216ENST00000533839 TNIKQ9UKE5 1360 aa16.04■□□□□ 0.16
FOXRED1-216ENST00000533839 FAM69CQ0P6D2 419 aa15.99■□□□□ 0.15
FOXRED1-216ENST00000533839 IQGAP2Q13576 1575 aa15.98■□□□□ 0.15
FOXRED1-216ENST00000533839 EEA1Q15075 1411 aa15.98■□□□□ 0.15
FOXRED1-216ENST00000533839 PRXQ9BXM0 1461 aa15.94■□□□□ 0.14
FOXRED1-216ENST00000533839 GOLGA3Q08378 1498 aa15.92■□□□□ 0.14
FOXRED1-216ENST00000533839 CHIC1Q5VXU3 224 aa15.91■□□□□ 0.14
FOXRED1-216ENST00000533839 UACAQ9BZF9 1416 aa15.91■□□□□ 0.14
FOXRED1-216ENST00000533839 UGGT2Q9NYU1 1516 aa15.9■□□□□ 0.14
FOXRED1-216ENST00000533839 AEBP2Q6ZN18 517 aaPredicted RBP15.9■□□□□ 0.14
FOXRED1-216ENST00000533839 DISP1Q96F81 1524 aa15.88■□□□□ 0.13
FOXRED1-216ENST00000533839 ABCC10Q5T3U5 1492 aa15.87■□□□□ 0.13
FOXRED1-216ENST00000533839 UHRF1BP1LA0JNW5 1464 aa15.85■□□□□ 0.13
FOXRED1-216ENST00000533839 MAPKBP1O60336 1514 aa15.85■□□□□ 0.13
FOXRED1-216ENST00000533839 ABCC2Q92887 1545 aa15.85■□□□□ 0.13
FOXRED1-216ENST00000533839 P3H3Q8IVL6 736 aa15.84■□□□□ 0.13
FOXRED1-216ENST00000533839 PLB1Q6P1J6 1458 aa15.84■□□□□ 0.13
FOXRED1-216ENST00000533839 ADCY10Q96PN6 1610 aa15.83■□□□□ 0.13
FOXRED1-216ENST00000533839 UBTFP17480 764 aaKnown RBP15.82■□□□□ 0.12
FOXRED1-216ENST00000533839 RANGAP1P46060 587 aaPredicted RBP15.81■□□□□ 0.12
FOXRED1-216ENST00000533839 ASXL2Q76L83 1435 aa15.79■□□□□ 0.12
FOXRED1-216ENST00000533839 KIAA0556O60303 1618 aa15.79■□□□□ 0.12
FOXRED1-216ENST00000533839 CTTNBP2Q8WZ74 1663 aa15.76■□□□□ 0.11
FOXRED1-216ENST00000533839 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.76■□□□□ 0.11
FOXRED1-216ENST00000533839 HNRNPUL2Q1KMD3 747 aaKnown RBP15.76■□□□□ 0.11
FOXRED1-216ENST00000533839 KCNH8Q96L42 1107 aa15.76■□□□□ 0.11
FOXRED1-216ENST00000533839 KDM5BQ9UGL1 1544 aa15.76■□□□□ 0.11
FOXRED1-216ENST00000533839 EHMT2Q96KQ7 1210 aa15.72■□□□□ 0.11
FOXRED1-216ENST00000533839 DIP2BQ9P265 1576 aa15.7■□□□□ 0.1
FOXRED1-216ENST00000533839 KIF13AQ9H1H9 1805 aa15.7■□□□□ 0.1
FOXRED1-216ENST00000533839 PLEKHD1A6NEE1 506 aa15.67■□□□□ 0.1
FOXRED1-216ENST00000533839 ARID3CA6NKF2 412 aa15.67■□□□□ 0.1
FOXRED1-216ENST00000533839 GLI2P10070 1586 aa15.66■□□□□ 0.1
FOXRED1-216ENST00000533839 EPRSP07814 1512 aaKnown RBP15.66■□□□□ 0.1
FOXRED1-216ENST00000533839 WDR7Q9Y4E6 1490 aa15.65■□□□□ 0.1
FOXRED1-216ENST00000533839 ABCA8O94911 1581 aa15.65■□□□□ 0.1
FOXRED1-216ENST00000533839 KIF21BO75037 1637 aa15.65■□□□□ 0.1
FOXRED1-216ENST00000533839 TEX14Q8IWB6 1497 aa15.64■□□□□ 0.09
FOXRED1-216ENST00000533839 ATP1B4Q9UN42 357 aaPredicted RBP15.63■□□□□ 0.09
FOXRED1-216ENST00000533839 CD109Q6YHK3 1445 aa15.62■□□□□ 0.09
FOXRED1-216ENST00000533839 ZCCHC11Q5TAX3 1644 aaKnown RBP15.62■□□□□ 0.09
FOXRED1-216ENST00000533839 ATP10BO94823 1461 aa15.61■□□□□ 0.09
FOXRED1-216ENST00000533839 CDK11AQ9UQ88 783 aaPredicted RBP15.61■□□□□ 0.09
FOXRED1-216ENST00000533839 TSPOAP1O95153 1857 aa15.59■□□□□ 0.09
FOXRED1-216ENST00000533839 SAMD9Q5K651 1589 aa15.59■□□□□ 0.09
FOXRED1-216ENST00000533839 FHOD3Q2V2M9 1422 aa15.59■□□□□ 0.09
FOXRED1-216ENST00000533839 EFCAB5A4FU69 1503 aa15.58■□□□□ 0.09
FOXRED1-216ENST00000533839 KDM6BO15054 1643 aa15.57■□□□□ 0.08
FOXRED1-216ENST00000533839 PHLDB1Q86UU1 1377 aa15.56■□□□□ 0.08
FOXRED1-216ENST00000533839 FMN1Q68DA7 1419 aa15.55■□□□□ 0.08
FOXRED1-216ENST00000533839 RAPGEF6Q8TEU7 1601 aa15.54■□□□□ 0.08
FOXRED1-216ENST00000533839 MAGI3Q5TCQ9 1506 aa15.53■□□□□ 0.08
FOXRED1-216ENST00000533839 MAP3K4Q9Y6R4 1608 aa15.5■□□□□ 0.07
FOXRED1-216ENST00000533839 NUP153P49790 1475 aaKnown RBP15.49■□□□□ 0.07
FOXRED1-216ENST00000533839 KDM4FA0A1W2PPD8 638 aa15.48■□□□□ 0.07
FOXRED1-216ENST00000533839 CFAP43Q8NDM7 1665 aa15.47■□□□□ 0.07
FOXRED1-216ENST00000533839 ARHGAP35Q9NRY4 1499 aa15.45■□□□□ 0.06
FOXRED1-216ENST00000533839 COL17A1Q9UMD9 1497 aaPredicted RBP15.44■□□□□ 0.06
FOXRED1-216ENST00000533839 PPRC1Q5VV67 1664 aaKnown RBP15.43■□□□□ 0.06
FOXRED1-216ENST00000533839 NEO1Q92859 1461 aa15.41■□□□□ 0.06
FOXRED1-216ENST00000533839 EFCAB2Q5VUJ9 269 aa15.41■□□□□ 0.06
FOXRED1-216ENST00000533839 ARAP3Q8WWN8 1544 aa15.4■□□□□ 0.06
FOXRED1-216ENST00000533839 RAPGEF3O95398 923 aa15.4■□□□□ 0.06
FOXRED1-216ENST00000533839 CLIP1P30622 1438 aa15.39■□□□□ 0.05
FOXRED1-216ENST00000533839 ABCA9Q8IUA7 1624 aa15.39■□□□□ 0.05
FOXRED1-216ENST00000533839 HECW1Q76N89 1606 aa15.36■□□□□ 0.05
FOXRED1-216ENST00000533839 CASKIN1Q8WXD9 1431 aa15.35■□□□□ 0.05
FOXRED1-216ENST00000533839 AKNAQ7Z591 1439 aa15.34■□□□□ 0.05
FOXRED1-216ENST00000533839 ARID4BQ4LE39 1312 aaPredicted RBP15.34■□□□□ 0.05
FOXRED1-216ENST00000533839 PLCH2O75038 1416 aa15.34■□□□□ 0.05
FOXRED1-216ENST00000533839 CDK13Q14004 1512 aaKnown RBP15.33■□□□□ 0.05
FOXRED1-216ENST00000533839 TROQ12816 1431 aaPredicted RBP15.33■□□□□ 0.04
FOXRED1-216ENST00000533839 FANCAO15360 1455 aa15.33■□□□□ 0.04
FOXRED1-216ENST00000533839 DENND4BO75064 1496 aaPredicted RBP15.33■□□□□ 0.04
FOXRED1-216ENST00000533839 CCDC18Q5T9S5 1454 aa15.32■□□□□ 0.04
FOXRED1-216ENST00000533839 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.31■□□□□ 0.04
FOXRED1-216ENST00000533839 MYT1LQ9UL68 1186 aa15.3■□□□□ 0.04
FOXRED1-216ENST00000533839 SCAPERQ9BY12 1400 aa15.27■□□□□ 0.04
FOXRED1-216ENST00000533839 LOC105371045A0A1W2PR82 267 aa15.27■□□□□ 0.04
FOXRED1-216ENST00000533839 ADGRL1O94910 1474 aa15.27■□□□□ 0.03
FOXRED1-216ENST00000533839 CFAP74Q9C0B2 1584 aa15.26■□□□□ 0.03
FOXRED1-216ENST00000533839 FYCO1Q9BQS8 1478 aa15.26■□□□□ 0.03
FOXRED1-216ENST00000533839 CEP162Q5TB80 1403 aa15.23■□□□□ 0.03
FOXRED1-216ENST00000533839 MTUS2Q5JR59 1369 aa15.23■□□□□ 0.03
FOXRED1-216ENST00000533839 MAGI2Q86UL8 1455 aa15.22■□□□□ 0.03
FOXRED1-216ENST00000533839 KIF14Q15058 1648 aa15.22■□□□□ 0.03
FOXRED1-216ENST00000533839 ZNF777Q9ULD5 760 aaPredicted RBP15.22■□□□□ 0.03
FOXRED1-216ENST00000533839 POGZQ7Z3K3 1410 aa15.22■□□□□ 0.03
FOXRED1-216ENST00000533839 CFDP1Q9UEE9 299 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms