RNA–Protein interactions for RNA: ENST00000533839.5

FOXRED1-216, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 4

Gene FOXRED1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-216ENST00000533839 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.97□□□□□ -0.814e-49■■■■■ 168.5
FOXRED1-216ENST00000533839 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.04□□□□□ -1.122e-29■■■■■ 45.4
FOXRED1-216ENST00000533839 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.49□□□□□ -0.736e-21■■■■■ 187
FOXRED1-216ENST00000533839 GTF2F1P35269 517 aaKnown RBP eCLIP10.59□□□□□ -0.712e-18■■■■■ 58.6
FOXRED1-216ENST00000533839 RBFOX2O43251 390 aaKnown RBP eCLIP7.44□□□□□ -1.221e-15■■■■■ 63.4
FOXRED1-216ENST00000533839 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.09□□□□□ -0.958e-13■■■■■ 132.1
FOXRED1-216ENST00000533839 AARSP49588 968 aaKnown RBP eCLIP10.39□□□□□ -0.752e-12■■■■■ 67
FOXRED1-216ENST00000533839 TIA1P31483 386 aaKnown RBP eCLIP8.86□□□□□ -0.992e-12■■■■■ 39.6
FOXRED1-216ENST00000533839 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.29□□□□□ -0.64e-12■■■■■ 39.7
FOXRED1-216ENST00000533839 DKC1O60832 514 aaKnown RBP eCLIP10.88□□□□□ -0.674e-12■■■■■ 36.8
FOXRED1-216ENST00000533839 DDX3XO00571 662 aaKnown RBP eCLIP9.78□□□□□ -0.849e-12■■□□□ 11.6
FOXRED1-216ENST00000533839 FTOQ9C0B1 505 aaKnown RBP eCLIP11.02□□□□□ -0.655e-11■■■■■ 204.6
FOXRED1-216ENST00000533839 NCBP2P52298 156 aaKnown RBP eCLIP8.83□□□□□ -11e-10■■■□□ 14.8
FOXRED1-216ENST00000533839 EFTUD2Q15029 972 aaKnown RBP eCLIP9.07□□□□□ -0.962e-10■■■□□ 16
FOXRED1-216ENST00000533839 AQRO60306 1485 aaKnown RBP eCLIP16.81■□□□□ 0.282e-10■■■■■ 41.8
FOXRED1-216ENST00000533839 SRSF1Q07955 248 aaKnown RBP eCLIP8.98□□□□□ -0.975e-10■■■■■ 36.9
FOXRED1-216ENST00000533839 EIF4G2P78344 907 aaKnown RBP eCLIP13.35□□□□□ -0.278e-10■■■■■ 191.5
FOXRED1-216ENST00000533839 HNRNPMP52272 730 aaKnown RBP eCLIP15.12■□□□□ 0.015e-9■■■■■ 27.4
FOXRED1-216ENST00000533839 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.6□□□□□ -0.876e-9■■■■■ 26.8
FOXRED1-216ENST00000533839 EWSR1Q01844 656 aaKnown RBP eCLIP6.98□□□□□ -1.298e-9■■■■■ 124.4
FOXRED1-216ENST00000533839 PCBP2Q15366 365 aaKnown RBP eCLIP9.02□□□□□ -0.971e-8■■■■■ 60.5
FOXRED1-216ENST00000533839 SRSF9Q13242 221 aaKnown RBP eCLIP5.97□□□□□ -1.452e-8■■■□□ 15
FOXRED1-216ENST00000533839 SF3A3Q12874 501 aaKnown RBP eCLIP8.41□□□□□ -1.063e-8■■■■■ 54.4
FOXRED1-216ENST00000533839 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.02□□□□□ -0.813e-8■■■■■ 33.8
FOXRED1-216ENST00000533839 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.09□□□□□ -1.114e-8■■■■■ 29
FOXRED1-216ENST00000533839 SMNDC1O75940 238 aaKnown RBP eCLIP8.67□□□□□ -1.026e-8■■■□□ 19.1
FOXRED1-216ENST00000533839 FUSP35637 526 aaKnown RBP eCLIP6.38□□□□□ -1.391e-7■■■■□ 22.5
FOXRED1-216ENST00000533839 SAFB2Q14151 953 aaKnown RBP eCLIP13.86□□□□□ -0.191e-7■■□□□ 13.2
FOXRED1-216ENST00000533839 SF3B1O75533 1304 aaKnown RBP eCLIP10.55□□□□□ -0.722e-7■■■■■ 53.5
FOXRED1-216ENST00000533839 U2AF2P26368 475 aaKnown RBP eCLIP10.7□□□□□ -0.73e-7■■□□□ 11.5
FOXRED1-216ENST00000533839 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.17□□□□□ -0.783e-7■■■■■ 142.8
FOXRED1-216ENST00000533839 PRPF4O43172 522 aaKnown RBP eCLIP9.24□□□□□ -0.933e-7■■■■■ 39
FOXRED1-216ENST00000533839 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.03□□□□□ -0.966e-7■■■■■ 139.2
FOXRED1-216ENST00000533839 PPIGQ13427 754 aaKnown RBP eCLIP11.11□□□□□ -0.638e-7■■□□□ 12.6
FOXRED1-216ENST00000533839 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.67□□□□□ -0.541e-6■■■■□ 24.6
FOXRED1-216ENST00000533839 RPS3P23396 243 aaKnown RBP eCLIP9.33□□□□□ -0.921e-6■■□□□ 12.2
FOXRED1-216ENST00000533839 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.58□□□□□ -0.721e-6■■■■□ 21.1
FOXRED1-216ENST00000533839 CDC40O60508 579 aaKnown RBP eCLIP8.91□□□□□ -0.981e-6■■■■□ 21.3
FOXRED1-216ENST00000533839 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.02□□□□□ -0.651e-6■□□□□ 9.8
FOXRED1-216ENST00000533839 ZRANB2O95218 330 aaKnown RBP eCLIP9.64□□□□□ -0.871e-6■■■■■ 42
FOXRED1-216ENST00000533839 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.71□□□□□ -0.051e-6■■■□□ 16.9
FOXRED1-216ENST00000533839 SF3B4Q15427 424 aaKnown RBP eCLIP8.9□□□□□ -0.982e-6■■■■□ 26.4
FOXRED1-216ENST00000533839 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.34□□□□□ -0.593e-6■■■■■ 37.5
FOXRED1-216ENST00000533839 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.54□□□□□ -1.23e-6■■■■□ 23.2
FOXRED1-216ENST00000533839 DDX21Q9NR30 783 aaKnown RBP eCLIP12.47□□□□□ -0.413e-6■■■■■ 35.5
FOXRED1-216ENST00000533839 AATFQ9NY61 560 aaKnown RBP eCLIP11.69□□□□□ -0.545e-6■■■■□ 23
FOXRED1-216ENST00000533839 HNRNPUQ00839 825 aaKnown RBP eCLIP12.04□□□□□ -0.485e-6■□□□□ 10.2
Retrieved 47 of 47 RNA–protein pairs in 21.7 ms