RNA–Protein interactions for RNA: ENST00000533529.1

SETDB1-216, Transcript of SET domain bifurcated 1, humanhuman

TSL 3

Gene SETDB1, Length 485 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETDB1-216ENST00000533529 AEBP2Q6ZN18 517 aaPredicted RBP28.07■■■□□ 2.08
SETDB1-216ENST00000533529 CHIC1Q5VXU3 224 aa26.4■■□□□ 1.82
SETDB1-216ENST00000533529 SENP3Q9H4L4 574 aaPredicted RBP24.16■■□□□ 1.46
SETDB1-216ENST00000533529 PHF23Q9BUL5 403 aaPredicted RBP23.73■■□□□ 1.39
SETDB1-216ENST00000533529 FOXD1Q16676 465 aa22.47■■□□□ 1.19
SETDB1-216ENST00000533529 POTEDQ86YR6 584 aa21.5■■□□□ 1.03
SETDB1-216ENST00000533529 MSH5O43196 834 aa21.33■■□□□ 1.01
SETDB1-216ENST00000533529 PIAS4Q8N2W9 510 aaPredicted RBP20.96■□□□□ 0.95
SETDB1-216ENST00000533529 PLPPR3Q6T4P5 718 aa20.86■□□□□ 0.93
SETDB1-216ENST00000533529 PPP6R1Q9UPN7 881 aa20.61■□□□□ 0.89
SETDB1-216ENST00000533529 ADRA2BP18089 450 aa20.56■□□□□ 0.88
SETDB1-216ENST00000533529 DMRT2Q9Y5R5 561 aa19.04■□□□□ 0.64
SETDB1-216ENST00000533529 MAPK8IP2Q13387 824 aaPredicted RBP19■□□□□ 0.63
SETDB1-216ENST00000533529 SCAF1Q9H7N4 1312 aaKnown RBP18.98■□□□□ 0.63
SETDB1-216ENST00000533529 CACNB1Q02641 598 aaPredicted RBP18.58■□□□□ 0.56
SETDB1-216ENST00000533529 DCAF8L1A6NGE4 600 aa18.37■□□□□ 0.53
SETDB1-216ENST00000533529 PPP4R3CPQ6ZMV5 832 aa18.19■□□□□ 0.5
SETDB1-216ENST00000533529 HOXD11P31277 338 aaPredicted RBP18.15■□□□□ 0.5
SETDB1-216ENST00000533529 RNF39Q9H2S5 420 aa18.08■□□□□ 0.48
SETDB1-216ENST00000533529 CNKSR2Q8WXI2 1034 aa17.99■□□□□ 0.47
SETDB1-216ENST00000533529 RNF216Q9NWF9 866 aaPredicted RBP17.93■□□□□ 0.46
SETDB1-216ENST00000533529 C1QBPQ07021 282 aaKnown RBP17.85■□□□□ 0.45
SETDB1-216ENST00000533529 DNAJC5BQ9UF47 199 aa17.66■□□□□ 0.42
SETDB1-216ENST00000533529 NCBP3Q53F19 620 aaKnown RBP17.45■□□□□ 0.38
SETDB1-216ENST00000533529 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.38■□□□□ 0.37
SETDB1-216ENST00000533529 NPM3O75607 178 aaKnown RBP17.07■□□□□ 0.32
SETDB1-216ENST00000533529 U3KPZ7 1027 aaPredicted RBP16.87■□□□□ 0.29
SETDB1-216ENST00000533529 CAPN15O75808 1086 aa16.84■□□□□ 0.29
SETDB1-216ENST00000533529 POTEHQ6S545 545 aa16.8■□□□□ 0.28
SETDB1-216ENST00000533529 DSG3P32926 999 aa16.77■□□□□ 0.28
SETDB1-216ENST00000533529 SPINK5Q9NQ38 1064 aaPredicted RBP16.75■□□□□ 0.27
SETDB1-216ENST00000533529 APLP2Q06481 763 aa16.54■□□□□ 0.24
SETDB1-216ENST00000533529 TRHP20396 242 aaPredicted RBP16.45■□□□□ 0.22
SETDB1-216ENST00000533529 ZNF219Q9P2Y4 722 aaPredicted RBP16.44■□□□□ 0.22
SETDB1-216ENST00000533529 SLC4A2P04920 1241 aa16.38■□□□□ 0.21
SETDB1-216ENST00000533529 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.37■□□□□ 0.21
SETDB1-216ENST00000533529 HNRNPUL2Q1KMD3 747 aaKnown RBP16.37■□□□□ 0.21
SETDB1-216ENST00000533529 ABCB7O75027 752 aa16.36■□□□□ 0.21
SETDB1-216ENST00000533529 KCNA4P22459 653 aa16.31■□□□□ 0.2
SETDB1-216ENST00000533529 SAMD1Q6SPF0 538 aaPredicted RBP16.22■□□□□ 0.19
SETDB1-216ENST00000533529 RBM42Q9BTD8 480 aaKnown RBP16.14■□□□□ 0.17
SETDB1-216ENST00000533529 CHRDL2Q6WN34 429 aa15.89■□□□□ 0.13
SETDB1-216ENST00000533529 MYCNP04198 464 aaPredicted RBP15.87■□□□□ 0.13
SETDB1-216ENST00000533529 POLA2Q14181 598 aa15.87■□□□□ 0.13
SETDB1-216ENST00000533529 AKT1S1Q96B36 256 aa15.62■□□□□ 0.09
SETDB1-216ENST00000533529 ZBTB12Q9Y330 459 aaPredicted RBP15.62■□□□□ 0.09
SETDB1-216ENST00000533529 SP7Q8TDD2 431 aaPredicted RBP15.54■□□□□ 0.08
SETDB1-216ENST00000533529 FOXD4L1Q9NU39 408 aa15.45■□□□□ 0.06
SETDB1-216ENST00000533529 REM2Q8IYK8 340 aaPredicted RBP15.43■□□□□ 0.06
SETDB1-216ENST00000533529 ATF5Q9Y2D1 282 aaPredicted RBP15.41■□□□□ 0.06
SETDB1-216ENST00000533529 PIP4P2Q8N4L2 257 aa15.39■□□□□ 0.05
SETDB1-216ENST00000533529 SLC4A1APQ9BWU0 796 aaKnown RBP15.38■□□□□ 0.05
SETDB1-216ENST00000533529 OSCARQ8IYS5 282 aa15.37■□□□□ 0.05
SETDB1-216ENST00000533529 HAX1O00165 279 aa15.29■□□□□ 0.04
SETDB1-216ENST00000533529 PITPNM1O00562 1244 aa15.26■□□□□ 0.03
SETDB1-216ENST00000533529 FXR2P51116 673 aaKnown RBP eCLIP15.22■□□□□ 0.03
SETDB1-216ENST00000533529 SPDYE2BA6NHP3 402 aa15.04■□□□□ -0
SETDB1-216ENST00000533529 SPDYE6P0CI01 402 aa15.04■□□□□ -0
SETDB1-216ENST00000533529 ATXN8OSP0DMR3 200 aa15.04■□□□□ -0
SETDB1-216ENST00000533529 SPDYE2Q495Y8 402 aa15.04■□□□□ -0
SETDB1-216ENST00000533529 FBLN2P98095 1184 aa15.03■□□□□ -0
SETDB1-216ENST00000533529 ZBTB22O15209 634 aa14.93□□□□□ -0.02
SETDB1-216ENST00000533529 EVX2Q03828 476 aa14.92□□□□□ -0.02
SETDB1-216ENST00000533529 SPDYE1Q8NFV5 336 aaPredicted RBP14.91□□□□□ -0.02
SETDB1-216ENST00000533529 PRKAR2AP13861 404 aaKnown RBP14.9□□□□□ -0.02
SETDB1-216ENST00000533529 CLEC11AQ9Y240 323 aa14.9□□□□□ -0.02
SETDB1-216ENST00000533529 ZNF692Q9BU19 519 aaPredicted RBP14.78□□□□□ -0.04
SETDB1-216ENST00000533529 C19orf67A6NJJ6 358 aa14.75□□□□□ -0.05
SETDB1-216ENST00000533529 SSUH2Q9Y2M2 353 aa14.73□□□□□ -0.05
SETDB1-216ENST00000533529 MKRN4PQ13434 485 aaPredicted RBP14.69□□□□□ -0.06
SETDB1-216ENST00000533529 GABBR2O75899 941 aa14.65□□□□□ -0.06
SETDB1-216ENST00000533529 PRR29P0C7W0 189 aa14.6□□□□□ -0.07
SETDB1-216ENST00000533529 CHADLQ6NUI6 762 aa14.59□□□□□ -0.07
SETDB1-216ENST00000533529 LHX8Q68G74 356 aa14.57□□□□□ -0.08
SETDB1-216ENST00000533529 PABPN1Q86U42 306 aaKnown RBP eCLIP14.53□□□□□ -0.08
SETDB1-216ENST00000533529 CD44P16070 742 aaKnown RBP14.41□□□□□ -0.1
SETDB1-216ENST00000533529 CLCN6P51797 869 aa14.38□□□□□ -0.11
SETDB1-216ENST00000533529 FARP1Q9Y4F1 1045 aaPredicted RBP14.36□□□□□ -0.11
SETDB1-216ENST00000533529 POTEIP0CG38 1075 aa14.26□□□□□ -0.13
SETDB1-216ENST00000533529 DCBLD2Q96PD2 775 aa14.25□□□□□ -0.13
SETDB1-216ENST00000533529 ZNF579Q8NAF0 562 aaKnown RBP14.15□□□□□ -0.14
SETDB1-216ENST00000533529 ZRANB1Q9UGI0 708 aa14.14□□□□□ -0.15
SETDB1-216ENST00000533529 STAG3Q9UJ98 1225 aa14.12□□□□□ -0.15
SETDB1-216ENST00000533529 PLSCR2Q9NRY7 297 aa14.05□□□□□ -0.16
SETDB1-216ENST00000533529 CREBZFQ9NS37 354 aa14.04□□□□□ -0.16
SETDB1-216ENST00000533529 PAK3O75914 559 aaPredicted RBP14.02□□□□□ -0.17
SETDB1-216ENST00000533529 GALR2O43603 387 aaPredicted RBP13.96□□□□□ -0.17
SETDB1-216ENST00000533529 NPM1P06748 294 aaKnown RBP eCLIP13.9□□□□□ -0.18
SETDB1-216ENST00000533529 SPDYE4A6NLX3 237 aa13.87□□□□□ -0.19
SETDB1-216ENST00000533529 CSRNP3Q8WYN3 585 aa13.87□□□□□ -0.19
SETDB1-216ENST00000533529 OTUD5Q96G74 571 aa13.86□□□□□ -0.19
SETDB1-216ENST00000533529 PHF12Q96QT6 1004 aa13.86□□□□□ -0.19
SETDB1-216ENST00000533529 POTEB2H3BUK9 544 aa13.78□□□□□ -0.2
SETDB1-216ENST00000533529 POTEMA6NI47 508 aa13.75□□□□□ -0.21
SETDB1-216ENST00000533529 PELP1Q8IZL8 1130 aaKnown RBP13.7□□□□□ -0.22
SETDB1-216ENST00000533529 POTEGQ6S5H5 508 aa13.69□□□□□ -0.22
SETDB1-216ENST00000533529 SLC39A7Q92504 469 aa13.69□□□□□ -0.22
SETDB1-216ENST00000533529 METRNQ9UJH8 293 aa13.69□□□□□ -0.22
SETDB1-216ENST00000533529 MNX1P50219 401 aaPredicted RBP13.68□□□□□ -0.22
SETDB1-216ENST00000533529 C7P10643 843 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 1138.4 ms