RNA–Protein interactions for RNA: ENST00000533333.5

PAX6-228, Transcript of paired box 6, humanhuman

TSL 2

Gene PAX6, Length 6,173 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-228ENST00000533333 DCAF8L2P0C7V8 631 aa30.27■■■□□ 2.44
PAX6-228ENST00000533333 PELP1Q8IZL8 1130 aaKnown RBP28.67■■■□□ 2.18
PAX6-228ENST00000533333 SUPT5HO00267 1087 aaKnown RBP28.29■■■□□ 2.12
PAX6-228ENST00000533333 EHMT2Q96KQ7 1210 aa28.22■■■□□ 2.11
PAX6-228ENST00000533333 APLP2Q06481 763 aa27.83■■■□□ 2.05
PAX6-228ENST00000533333 ERICH6Q7L0X2 663 aa27.71■■■□□ 2.03
PAX6-228ENST00000533333 FAM9AQ8IZU1 332 aaPredicted RBP27.67■■■□□ 2.02
PAX6-228ENST00000533333 CCER1Q8TC90 406 aaPredicted RBP27.42■■□□□ 1.98
PAX6-228ENST00000533333 SHROOM4Q9ULL8 1493 aa27.37■■□□□ 1.97
PAX6-228ENST00000533333 TTBK1Q5TCY1 1321 aaPredicted RBP27.28■■□□□ 1.96
PAX6-228ENST00000533333 RANGAP1P46060 587 aaPredicted RBP26.95■■□□□ 1.9
PAX6-228ENST00000533333 ATP1B4Q9UN42 357 aaPredicted RBP26.92■■□□□ 1.9
PAX6-228ENST00000533333 CENPBP07199 599 aaPredicted RBP26.91■■□□□ 1.9
PAX6-228ENST00000533333 PCGF6Q9BYE7 350 aa26.89■■□□□ 1.89
PAX6-228ENST00000533333 NEFLP07196 543 aa26.73■■□□□ 1.87
PAX6-228ENST00000533333 MYT1Q01538 1121 aa26.55■■□□□ 1.84
PAX6-228ENST00000533333 DAXXQ9UER7 740 aaPredicted RBP26.43■■□□□ 1.82
PAX6-228ENST00000533333 YTHDC1Q96MU7 727 aaKnown RBP26.41■■□□□ 1.82
PAX6-228ENST00000533333 NISCHQ9Y2I1 1504 aa26.38■■□□□ 1.81
PAX6-228ENST00000533333 ZEB1P37275 1124 aaPredicted RBP26.33■■□□□ 1.81
PAX6-228ENST00000533333 MYT1LQ9UL68 1186 aa26.27■■□□□ 1.8
PAX6-228ENST00000533333 UBTFP17480 764 aaKnown RBP26.18■■□□□ 1.78
PAX6-228ENST00000533333 POLR3GLQ9BT43 218 aa26.12■■□□□ 1.77
PAX6-228ENST00000533333 TRIM41Q8WV44 630 aa26.07■■□□□ 1.76
PAX6-228ENST00000533333 CHIC1Q5VXU3 224 aa25.9■■□□□ 1.74
PAX6-228ENST00000533333 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.86■■□□□ 1.73
PAX6-228ENST00000533333 HNRNPUL2Q1KMD3 747 aaKnown RBP25.86■■□□□ 1.73
PAX6-228ENST00000533333 SLC4A1APQ9BWU0 796 aaKnown RBP25.86■■□□□ 1.73
PAX6-228ENST00000533333 CNGB1Q14028 1251 aaPredicted RBP25.85■■□□□ 1.73
PAX6-228ENST00000533333 ZNF316A6NFI3 1004 aaPredicted RBP25.71■■□□□ 1.71
PAX6-228ENST00000533333 PPARGC1BQ86YN6 1023 aaKnown RBP25.69■■□□□ 1.7
PAX6-228ENST00000533333 CLSPNQ9HAW4 1339 aa25.68■■□□□ 1.7
PAX6-228ENST00000533333 ITGAEP38570 1179 aa25.68■■□□□ 1.7
PAX6-228ENST00000533333 RTL5Q5HYW3 569 aaPredicted RBP25.55■■□□□ 1.68
PAX6-228ENST00000533333 ZBTB47Q9UFB7 747 aaPredicted RBP25.24■■□□□ 1.63
PAX6-228ENST00000533333 SLC24A1O60721 1099 aa25.17■■□□□ 1.62
PAX6-228ENST00000533333 BCL11AQ9H165 835 aa25.1■■□□□ 1.61
PAX6-228ENST00000533333 TRIM26Q12899 539 aaPredicted RBP25.09■■□□□ 1.61
PAX6-228ENST00000533333 HRCP23327 699 aa24.99■■□□□ 1.59
PAX6-228ENST00000533333 TRIM52Q96A61 297 aa24.91■■□□□ 1.58
PAX6-228ENST00000533333 CANXP27824 592 aaKnown RBP24.85■■□□□ 1.57
PAX6-228ENST00000533333 BCANQ96GW7 911 aa24.82■■□□□ 1.56
PAX6-228ENST00000533333 FAM50AQ14320 339 aaKnown RBP24.81■■□□□ 1.56
PAX6-228ENST00000533333 ZNF326Q5BKZ1 582 aaKnown RBP24.77■■□□□ 1.56
PAX6-228ENST00000533333 NEFMP07197 916 aa24.75■■□□□ 1.55
PAX6-228ENST00000533333 NEUROD1Q13562 356 aa24.69■■□□□ 1.54
PAX6-228ENST00000533333 CDK11AQ9UQ88 783 aaPredicted RBP24.67■■□□□ 1.54
PAX6-228ENST00000533333 DIEXFQ68CQ4 756 aaKnown RBP24.62■■□□□ 1.53
PAX6-228ENST00000533333 ANP32CO43423 234 aa24.54■■□□□ 1.52
PAX6-228ENST00000533333 LOC105371045A0A1W2PR82 267 aa24.48■■□□□ 1.51
PAX6-228ENST00000533333 ANP32BQ92688 251 aaKnown RBP24.47■■□□□ 1.51
PAX6-228ENST00000533333 NPM2Q86SE8 214 aaKnown RBP24.37■■□□□ 1.49
PAX6-228ENST00000533333 FBLN2P98095 1184 aa24.37■■□□□ 1.49
PAX6-228ENST00000533333 HSP90AA1P07900 732 aaKnown RBP24.37■■□□□ 1.49
PAX6-228ENST00000533333 ANP32AP39687 249 aaKnown RBP24.36■■□□□ 1.49
PAX6-228ENST00000533333 EIF5BO60841 1220 aaKnown RBP24.33■■□□□ 1.49
PAX6-228ENST00000533333 ESF1Q9H501 851 aaKnown RBP24.27■■□□□ 1.48
PAX6-228ENST00000533333 PLPPR3Q6T4P5 718 aa24.26■■□□□ 1.47
PAX6-228ENST00000533333 CDK11BP21127 795 aaKnown RBP24.23■■□□□ 1.47
PAX6-228ENST00000533333 GTF3C3Q9Y5Q9 886 aa24.19■■□□□ 1.46
PAX6-228ENST00000533333 STAG3Q9UJ98 1225 aa24.14■■□□□ 1.45
PAX6-228ENST00000533333 UPF2Q9HAU5 1272 aaKnown RBP24.12■■□□□ 1.45
PAX6-228ENST00000533333 ARID3CA6NKF2 412 aa24.08■■□□□ 1.45
PAX6-228ENST00000533333 CHGAP10645 457 aaKnown RBP24.06■■□□□ 1.44
PAX6-228ENST00000533333 A0A0G2JS52 829 aa24.04■■□□□ 1.44
PAX6-228ENST00000533333 ZNF777Q9ULD5 760 aaPredicted RBP24.03■■□□□ 1.44
PAX6-228ENST00000533333 GLIPR1L2Q4G1C9 344 aa24.02■■□□□ 1.44
PAX6-228ENST00000533333 SCAF1Q9H7N4 1312 aaKnown RBP24■■□□□ 1.43
PAX6-228ENST00000533333 ARXQ96QS3 562 aa23.94■■□□□ 1.42
PAX6-228ENST00000533333 P3H3Q8IVL6 736 aa23.85■■□□□ 1.41
PAX6-228ENST00000533333 SALL2Q9Y467 1007 aaPredicted RBP23.82■■□□□ 1.4
PAX6-228ENST00000533333 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.77■■□□□ 1.4
PAX6-228ENST00000533333 TULP1O00294 542 aaPredicted RBP23.75■■□□□ 1.39
PAX6-228ENST00000533333 ZBTB7CA1YPR0 619 aa23.74■■□□□ 1.39
PAX6-228ENST00000533333 PABPN1Q86U42 306 aaKnown RBP eCLIP23.74■■□□□ 1.39
PAX6-228ENST00000533333 FKBP8Q14318 412 aa23.72■■□□□ 1.39
PAX6-228ENST00000533333 PLEKHG5O94827 1062 aa23.71■■□□□ 1.39
PAX6-228ENST00000533333 FAM9BQ8IZU0 186 aa23.69■■□□□ 1.38
PAX6-228ENST00000533333 MYH16Q9H6N6 1097 aa23.69■■□□□ 1.38
PAX6-228ENST00000533333 NBR1Q14596 966 aa23.68■■□□□ 1.38
PAX6-228ENST00000533333 NPM1P06748 294 aaKnown RBP eCLIP23.67■■□□□ 1.38
PAX6-228ENST00000533333 HNRNPUQ00839 825 aaKnown RBP eCLIP23.64■■□□□ 1.38
PAX6-228ENST00000533333 WDR43Q15061 677 aaKnown RBP eCLIP23.62■■□□□ 1.37
PAX6-228ENST00000533333 NCLP19338 710 aaKnown RBP23.61■■□□□ 1.37
PAX6-228ENST00000533333 C14orf37Q86TY3 774 aa23.59■■□□□ 1.37
PAX6-228ENST00000533333 CCDC136Q96JN2 1154 aa23.59■■□□□ 1.37
PAX6-228ENST00000533333 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.55■■□□□ 1.36
PAX6-228ENST00000533333 TONSLQ96HA7 1378 aa23.54■■□□□ 1.36
PAX6-228ENST00000533333 TMC1Q8TDI8 760 aa23.54■■□□□ 1.36
PAX6-228ENST00000533333 ZRSR1Q15695 479 aaKnown RBP23.52■■□□□ 1.36
PAX6-228ENST00000533333 ACIN1Q9UKV3 1341 aaKnown RBP23.51■■□□□ 1.35
PAX6-228ENST00000533333 HAP1P54257 671 aaPredicted RBP23.48■■□□□ 1.35
PAX6-228ENST00000533333 TRIM44Q96DX7 344 aaPredicted RBP23.47■■□□□ 1.35
PAX6-228ENST00000533333 SENP3Q9H4L4 574 aaPredicted RBP23.43■■□□□ 1.34
PAX6-228ENST00000533333 TPRNQ4KMQ1 711 aa23.43■■□□□ 1.34
PAX6-228ENST00000533333 NCBP3Q53F19 620 aaKnown RBP23.42■■□□□ 1.34
PAX6-228ENST00000533333 PTMAP06454 111 aaKnown RBP23.39■■□□□ 1.34
PAX6-228ENST00000533333 TNNT2P45379 298 aaPredicted RBP23.39■■□□□ 1.34
PAX6-228ENST00000533333 DDX10Q13206 875 aaKnown RBP23.39■■□□□ 1.33
PAX6-228ENST00000533333 GOLGA6L22H0YM25 854 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms