RNA–Protein interactions for RNA: ENST00000533268.1

RPA2P3-201, Transcript of replication protein A2 pseudogene 3, humanhuman

BASIC

Gene RPA2P3, Length 770 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA2P3-201ENST00000533268 AEBP2Q6ZN18 517 aaPredicted RBP17.41■□□□□ 0.38
RPA2P3-201ENST00000533268 CHIC1Q5VXU3 224 aa16.71■□□□□ 0.27
RPA2P3-201ENST00000533268 SENP3Q9H4L4 574 aaPredicted RBP14.78□□□□□ -0.04
RPA2P3-201ENST00000533268 PHF23Q9BUL5 403 aaPredicted RBP14.68□□□□□ -0.06
RPA2P3-201ENST00000533268 NISCHQ9Y2I1 1504 aa14.43□□□□□ -0.1
RPA2P3-201ENST00000533268 FOXD1Q16676 465 aa13.77□□□□□ -0.21
RPA2P3-201ENST00000533268 PLPPR3Q6T4P5 718 aa13.41□□□□□ -0.26
RPA2P3-201ENST00000533268 PPP6R1Q9UPN7 881 aa13.04□□□□□ -0.32
RPA2P3-201ENST00000533268 ADRA2BP18089 450 aa12.97□□□□□ -0.33
RPA2P3-201ENST00000533268 PIAS4Q8N2W9 510 aaPredicted RBP12.86□□□□□ -0.35
RPA2P3-201ENST00000533268 MSH5O43196 834 aa12.79□□□□□ -0.36
RPA2P3-201ENST00000533268 CCDC180Q9P1Z9 1646 aa12.78□□□□□ -0.36
RPA2P3-201ENST00000533268 POTEDQ86YR6 584 aa12.16□□□□□ -0.46
RPA2P3-201ENST00000533268 ZCCHC6Q5VYS8 1495 aaKnown RBP12.15□□□□□ -0.46
RPA2P3-201ENST00000533268 DCAF1Q9Y4B6 1507 aa12.06□□□□□ -0.48
RPA2P3-201ENST00000533268 MYO15BQ96JP2 1530 aa11.97□□□□□ -0.49
RPA2P3-201ENST00000533268 MAPK8IP2Q13387 824 aaPredicted RBP11.86□□□□□ -0.51
RPA2P3-201ENST00000533268 SCAF1Q9H7N4 1312 aaKnown RBP11.86□□□□□ -0.51
RPA2P3-201ENST00000533268 NACADO15069 1562 aa11.84□□□□□ -0.51
RPA2P3-201ENST00000533268 ABCC9O60706 1549 aa11.84□□□□□ -0.51
RPA2P3-201ENST00000533268 PPP4R3CPQ6ZMV5 832 aa11.78□□□□□ -0.52
RPA2P3-201ENST00000533268 DMRT2Q9Y5R5 561 aa11.78□□□□□ -0.52
RPA2P3-201ENST00000533268 RB1CC1Q8TDY2 1594 aa11.73□□□□□ -0.53
RPA2P3-201ENST00000533268 DCAF8L2P0C7V8 631 aa11.62□□□□□ -0.55
RPA2P3-201ENST00000533268 SCRIBQ14160 1630 aa11.54□□□□□ -0.56
RPA2P3-201ENST00000533268 CNKSR2Q8WXI2 1034 aa11.52□□□□□ -0.57
RPA2P3-201ENST00000533268 UNC13AQ9UPW8 1703 aa11.51□□□□□ -0.57
RPA2P3-201ENST00000533268 SHROOM4Q9ULL8 1493 aa11.47□□□□□ -0.57
RPA2P3-201ENST00000533268 HOXD11P31277 338 aaPredicted RBP11.44□□□□□ -0.58
RPA2P3-201ENST00000533268 RNF216Q9NWF9 866 aaPredicted RBP11.39□□□□□ -0.59
RPA2P3-201ENST00000533268 NCBP3Q53F19 620 aaKnown RBP11.36□□□□□ -0.59
RPA2P3-201ENST00000533268 BICRAQ9NZM4 1560 aa11.33□□□□□ -0.6
RPA2P3-201ENST00000533268 NPM3O75607 178 aaKnown RBP11.24□□□□□ -0.61
RPA2P3-201ENST00000533268 BAZ1AQ9NRL2 1556 aaPredicted RBP11.2□□□□□ -0.62
RPA2P3-201ENST00000533268 KCNA4P22459 653 aa11.18□□□□□ -0.62
RPA2P3-201ENST00000533268 DCAF8L1A6NGE4 600 aa11.15□□□□□ -0.62
RPA2P3-201ENST00000533268 SMARCA4P51532 1647 aa11.14□□□□□ -0.63
RPA2P3-201ENST00000533268 RSF1Q96T23 1441 aaPredicted RBP11.11□□□□□ -0.63
RPA2P3-201ENST00000533268 CECR2Q9BXF3 1484 aa11.1□□□□□ -0.63
RPA2P3-201ENST00000533268 MROH2BQ7Z745 1585 aa11.08□□□□□ -0.64
RPA2P3-201ENST00000533268 PEG3Q9GZU2 1588 aa11.08□□□□□ -0.64
RPA2P3-201ENST00000533268 DNAJC5BQ9UF47 199 aa11.07□□□□□ -0.64
RPA2P3-201ENST00000533268 PABPN1Q86U42 306 aaKnown RBP eCLIP11.03□□□□□ -0.64
RPA2P3-201ENST00000533268 WIZO95785 1651 aa11.01□□□□□ -0.65
RPA2P3-201ENST00000533268 SMARCA2P51531 1590 aa10.99□□□□□ -0.65
RPA2P3-201ENST00000533268 EIF4G1Q04637 1599 aaKnown RBP10.99□□□□□ -0.65
RPA2P3-201ENST00000533268 SUPT5HO00267 1087 aaKnown RBP10.99□□□□□ -0.65
RPA2P3-201ENST00000533268 TOP2AP11388 1531 aaKnown RBP10.97□□□□□ -0.65
RPA2P3-201ENST00000533268 RNF39Q9H2S5 420 aa10.96□□□□□ -0.65
RPA2P3-201ENST00000533268 HMGXB3Q12766 1538 aa10.93□□□□□ -0.66
RPA2P3-201ENST00000533268 ATAD2BQ9ULI0 1458 aa10.91□□□□□ -0.66
RPA2P3-201ENST00000533268 NCAPD3P42695 1498 aa10.87□□□□□ -0.67
RPA2P3-201ENST00000533268 BAZ1BQ9UIG0 1483 aaKnown RBP10.86□□□□□ -0.67
RPA2P3-201ENST00000533268 CC2D2AQ9P2K1 1620 aa10.82□□□□□ -0.68
RPA2P3-201ENST00000533268 CACNB1Q02641 598 aaPredicted RBP10.81□□□□□ -0.68
RPA2P3-201ENST00000533268 C1QBPQ07021 282 aaKnown RBP10.8□□□□□ -0.68
RPA2P3-201ENST00000533268 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.8□□□□□ -0.68
RPA2P3-201ENST00000533268 CCDC88BA6NC98 1476 aa10.74□□□□□ -0.69
RPA2P3-201ENST00000533268 PRDM2Q13029 1718 aa10.72□□□□□ -0.69
RPA2P3-201ENST00000533268 SLC4A2P04920 1241 aa10.71□□□□□ -0.69
RPA2P3-201ENST00000533268 U3KPZ7 1027 aaPredicted RBP10.66□□□□□ -0.7
RPA2P3-201ENST00000533268 CFTRP13569 1480 aa10.6□□□□□ -0.71
RPA2P3-201ENST00000533268 LAMC3Q9Y6N6 1575 aa10.56□□□□□ -0.72
RPA2P3-201ENST00000533268 SLC4A1APQ9BWU0 796 aaKnown RBP10.56□□□□□ -0.72
RPA2P3-201ENST00000533268 CADPSQ9ULU8 1353 aa10.52□□□□□ -0.72
RPA2P3-201ENST00000533268 BIVM-ERCC5R4GMW8 1640 aa10.51□□□□□ -0.73
RPA2P3-201ENST00000533268 ABCC8Q09428 1581 aa10.49□□□□□ -0.73
RPA2P3-201ENST00000533268 WRNQ14191 1432 aaPredicted RBP eCLIP10.49□□□□□ -0.73
RPA2P3-201ENST00000533268 TOP2BQ02880 1626 aa10.48□□□□□ -0.73
RPA2P3-201ENST00000533268 SYNJ1O43426 1573 aa10.45□□□□□ -0.74
RPA2P3-201ENST00000533268 TRIM41Q8WV44 630 aa10.43□□□□□ -0.74
RPA2P3-201ENST00000533268 SPINK5Q9NQ38 1064 aaPredicted RBP10.43□□□□□ -0.74
RPA2P3-201ENST00000533268 FANCD2Q9BXW9 1451 aa10.42□□□□□ -0.74
RPA2P3-201ENST00000533268 PDS5BQ9NTI5 1447 aa10.41□□□□□ -0.74
RPA2P3-201ENST00000533268 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.4□□□□□ -0.74
RPA2P3-201ENST00000533268 HNRNPUL2Q1KMD3 747 aaKnown RBP10.4□□□□□ -0.74
RPA2P3-201ENST00000533268 CEP164Q9UPV0 1460 aa10.4□□□□□ -0.74
RPA2P3-201ENST00000533268 EEA1Q15075 1411 aa10.4□□□□□ -0.75
RPA2P3-201ENST00000533268 DNMBPQ6XZF7 1577 aa10.39□□□□□ -0.75
RPA2P3-201ENST00000533268 CUX1P39880 1505 aa10.39□□□□□ -0.75
RPA2P3-201ENST00000533268 KIF21AQ7Z4S6 1674 aa10.38□□□□□ -0.75
RPA2P3-201ENST00000533268 NESP48681 1621 aa10.37□□□□□ -0.75
RPA2P3-201ENST00000533268 MYCNP04198 464 aaPredicted RBP10.37□□□□□ -0.75
RPA2P3-201ENST00000533268 FOXD4L1Q9NU39 408 aa10.36□□□□□ -0.75
RPA2P3-201ENST00000533268 CAPN15O75808 1086 aa10.35□□□□□ -0.75
RPA2P3-201ENST00000533268 SAMD1Q6SPF0 538 aaPredicted RBP10.35□□□□□ -0.75
RPA2P3-201ENST00000533268 APLP2Q06481 763 aa10.33□□□□□ -0.76
RPA2P3-201ENST00000533268 ZBTB22O15209 634 aa10.32□□□□□ -0.76
RPA2P3-201ENST00000533268 DSG3P32926 999 aa10.32□□□□□ -0.76
RPA2P3-201ENST00000533268 TOPBP1Q92547 1522 aa10.32□□□□□ -0.76
RPA2P3-201ENST00000533268 WDR97A6NE52 1622 aa10.29□□□□□ -0.76
RPA2P3-201ENST00000533268 FGD5Q6ZNL6 1462 aa10.29□□□□□ -0.76
RPA2P3-201ENST00000533268 MRC2Q9UBG0 1479 aa10.29□□□□□ -0.76
RPA2P3-201ENST00000533268 WDR62O43379 1518 aa10.28□□□□□ -0.76
RPA2P3-201ENST00000533268 URB2Q14146 1524 aaKnown RBP10.28□□□□□ -0.76
RPA2P3-201ENST00000533268 KIF21BO75037 1637 aa10.28□□□□□ -0.76
RPA2P3-201ENST00000533268 ZNF219Q9P2Y4 722 aaPredicted RBP10.26□□□□□ -0.77
RPA2P3-201ENST00000533268 THOC2Q8NI27 1593 aaKnown RBP10.26□□□□□ -0.77
RPA2P3-201ENST00000533268 POLA1P09884 1462 aaPredicted RBP10.25□□□□□ -0.77
RPA2P3-201ENST00000533268 KIF27Q86VH2 1401 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms