RNA–Protein interactions for RNA: ENST00000533131.5

BDNF-217, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-217ENST00000533131 SLC24A1O60721 1099 aa13.93□□□□□ -0.18
BDNF-217ENST00000533131 EHMT2Q96KQ7 1210 aa13.63□□□□□ -0.23
BDNF-217ENST00000533131 CHIC1Q5VXU3 224 aa13.54□□□□□ -0.24
BDNF-217ENST00000533131 PLPPR3Q6T4P5 718 aa12.84□□□□□ -0.35
BDNF-217ENST00000533131 RTN4Q9NQC3 1192 aaKnown RBP12.71□□□□□ -0.37
BDNF-217ENST00000533131 AEBP2Q6ZN18 517 aaPredicted RBP12.7□□□□□ -0.38
BDNF-217ENST00000533131 DAXXQ9UER7 740 aaPredicted RBP12.4□□□□□ -0.42
BDNF-217ENST00000533131 AMER1Q5JTC6 1135 aaPredicted RBP12.3□□□□□ -0.44
BDNF-217ENST00000533131 PRKCSHP14314 528 aaPredicted RBP12.3□□□□□ -0.44
BDNF-217ENST00000533131 NCBP3Q53F19 620 aaKnown RBP12.24□□□□□ -0.45
BDNF-217ENST00000533131 KCNA4P22459 653 aa12.22□□□□□ -0.45
BDNF-217ENST00000533131 PHF23Q9BUL5 403 aaPredicted RBP12.18□□□□□ -0.46
BDNF-217ENST00000533131 CSRNP3Q8WYN3 585 aa12.14□□□□□ -0.47
BDNF-217ENST00000533131 NISCHQ9Y2I1 1504 aa12.02□□□□□ -0.49
BDNF-217ENST00000533131 RANGAP1P46060 587 aaPredicted RBP11.97□□□□□ -0.49
BDNF-217ENST00000533131 PELP1Q8IZL8 1130 aaKnown RBP11.9□□□□□ -0.5
BDNF-217ENST00000533131 ERICH6Q7L0X2 663 aa11.9□□□□□ -0.5
BDNF-217ENST00000533131 MYT1Q01538 1121 aa11.89□□□□□ -0.51
BDNF-217ENST00000533131 TULP1O00294 542 aaPredicted RBP11.88□□□□□ -0.51
BDNF-217ENST00000533131 TIMELESSQ9UNS1 1208 aa11.82□□□□□ -0.52
BDNF-217ENST00000533131 SLC4A1APQ9BWU0 796 aaKnown RBP11.81□□□□□ -0.52
BDNF-217ENST00000533131 TPRNQ4KMQ1 711 aa11.75□□□□□ -0.53
BDNF-217ENST00000533131 TTBK1Q5TCY1 1321 aaPredicted RBP11.75□□□□□ -0.53
BDNF-217ENST00000533131 ARXQ96QS3 562 aa11.71□□□□□ -0.53
BDNF-217ENST00000533131 TAOK2Q9UL54 1235 aa11.7□□□□□ -0.54
BDNF-217ENST00000533131 HAP1P54257 671 aaPredicted RBP11.65□□□□□ -0.54
BDNF-217ENST00000533131 BCANQ96GW7 911 aa11.64□□□□□ -0.55
BDNF-217ENST00000533131 HOMEZQ8IX15 550 aa11.6□□□□□ -0.55
BDNF-217ENST00000533131 PODXL2Q9NZ53 605 aa11.59□□□□□ -0.55
BDNF-217ENST00000533131 DCAF8L2P0C7V8 631 aa11.52□□□□□ -0.57
BDNF-217ENST00000533131 APLP2Q06481 763 aa11.47□□□□□ -0.57
BDNF-217ENST00000533131 KLHL34Q8N239 644 aa11.39□□□□□ -0.59
BDNF-217ENST00000533131 EIF5BO60841 1220 aaKnown RBP11.37□□□□□ -0.59
BDNF-217ENST00000533131 PLCB2Q00722 1185 aa11.35□□□□□ -0.59
BDNF-217ENST00000533131 GTF3C3Q9Y5Q9 886 aa11.35□□□□□ -0.59
BDNF-217ENST00000533131 ADRA2BP18089 450 aa11.29□□□□□ -0.6
BDNF-217ENST00000533131 C14orf37Q86TY3 774 aa11.29□□□□□ -0.6
BDNF-217ENST00000533131 FKBP8Q14318 412 aa11.24□□□□□ -0.61
BDNF-217ENST00000533131 NPM2Q86SE8 214 aaKnown RBP11.22□□□□□ -0.61
BDNF-217ENST00000533131 SUPT5HO00267 1087 aaKnown RBP11.21□□□□□ -0.62
BDNF-217ENST00000533131 ZBTB22O15209 634 aa11.07□□□□□ -0.64
BDNF-217ENST00000533131 TMEM132AQ24JP5 1023 aa10.97□□□□□ -0.65
BDNF-217ENST00000533131 SHROOM4Q9ULL8 1493 aa10.95□□□□□ -0.66
BDNF-217ENST00000533131 FBLN2P98095 1184 aa10.9□□□□□ -0.66
BDNF-217ENST00000533131 TRIM26Q12899 539 aaPredicted RBP10.89□□□□□ -0.67
BDNF-217ENST00000533131 VSIG10Q8N0Z9 540 aa10.88□□□□□ -0.67
BDNF-217ENST00000533131 PLEKHG5O94827 1062 aa10.87□□□□□ -0.67
BDNF-217ENST00000533131 NPM3O75607 178 aaKnown RBP10.84□□□□□ -0.67
BDNF-217ENST00000533131 CFAP44Q96MT7 982 aa10.83□□□□□ -0.68
BDNF-217ENST00000533131 NBR1Q14596 966 aa10.82□□□□□ -0.68
BDNF-217ENST00000533131 KDM2AQ9Y2K7 1162 aa10.82□□□□□ -0.68
BDNF-217ENST00000533131 UBTFP17480 764 aaKnown RBP10.81□□□□□ -0.68
BDNF-217ENST00000533131 ARID3AQ99856 593 aa10.79□□□□□ -0.68
BDNF-217ENST00000533131 CCDC180Q9P1Z9 1646 aa10.76□□□□□ -0.69
BDNF-217ENST00000533131 FBXO3Q9UK99 471 aa10.75□□□□□ -0.69
BDNF-217ENST00000533131 PAXIP1Q6ZW49 1069 aaPredicted RBP10.71□□□□□ -0.69
BDNF-217ENST00000533131 CDK11BP21127 795 aaKnown RBP10.64□□□□□ -0.71
BDNF-217ENST00000533131 CDK11AQ9UQ88 783 aaPredicted RBP10.64□□□□□ -0.71
BDNF-217ENST00000533131 POLR3GLQ9BT43 218 aa10.63□□□□□ -0.71
BDNF-217ENST00000533131 PPP4R3CPQ6ZMV5 832 aa10.63□□□□□ -0.71
BDNF-217ENST00000533131 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.62□□□□□ -0.71
BDNF-217ENST00000533131 LOC105371045A0A1W2PR82 267 aa10.59□□□□□ -0.71
BDNF-217ENST00000533131 FOXD4L1Q9NU39 408 aa10.55□□□□□ -0.72
BDNF-217ENST00000533131 HRCP23327 699 aa10.54□□□□□ -0.72
BDNF-217ENST00000533131 FAM9AQ8IZU1 332 aaPredicted RBP10.54□□□□□ -0.72
BDNF-217ENST00000533131 PPP6R1Q9UPN7 881 aa10.53□□□□□ -0.72
BDNF-217ENST00000533131 PCGF6Q9BYE7 350 aa10.52□□□□□ -0.72
BDNF-217ENST00000533131 ABCC9O60706 1549 aa10.51□□□□□ -0.73
BDNF-217ENST00000533131 TSHZ2Q9NRE2 1034 aa10.49□□□□□ -0.73
BDNF-217ENST00000533131 CHMP4AQ9BY43 222 aa10.46□□□□□ -0.73
BDNF-217ENST00000533131 PDIA4P13667 645 aaKnown RBP10.46□□□□□ -0.74
BDNF-217ENST00000533131 CCDC9Q9Y3X0 531 aaKnown RBP10.45□□□□□ -0.74
BDNF-217ENST00000533131 SENP3Q9H4L4 574 aaPredicted RBP10.44□□□□□ -0.74
BDNF-217ENST00000533131 DHX37Q8IY37 1157 aaKnown RBP10.4□□□□□ -0.74
BDNF-217ENST00000533131 ZBTB7CA1YPR0 619 aa10.39□□□□□ -0.75
BDNF-217ENST00000533131 PPARGC1BQ86YN6 1023 aaKnown RBP10.33□□□□□ -0.76
BDNF-217ENST00000533131 HMGB1P09429 215 aaKnown RBP10.3□□□□□ -0.76
BDNF-217ENST00000533131 IGSF3O75054 1194 aa10.29□□□□□ -0.76
BDNF-217ENST00000533131 BCL11AQ9H165 835 aa10.29□□□□□ -0.76
BDNF-217ENST00000533131 SPRYD3Q8NCJ5 442 aa10.27□□□□□ -0.77
BDNF-217ENST00000533131 HSP90B1P14625 803 aaKnown RBP10.26□□□□□ -0.77
BDNF-217ENST00000533131 PDE4CQ08493 712 aa10.26□□□□□ -0.77
BDNF-217ENST00000533131 NEUROD2Q15784 382 aa10.21□□□□□ -0.78
BDNF-217ENST00000533131 UBE2Q2Q8WVN8 375 aa10.2□□□□□ -0.78
BDNF-217ENST00000533131 ARID3CA6NKF2 412 aa10.19□□□□□ -0.78
BDNF-217ENST00000533131 BBXQ8WY36 941 aaPredicted RBP10.19□□□□□ -0.78
BDNF-217ENST00000533131 MYT1LQ9UL68 1186 aa10.19□□□□□ -0.78
BDNF-217ENST00000533131 SAMD1Q6SPF0 538 aaPredicted RBP10.18□□□□□ -0.78
BDNF-217ENST00000533131 UNC13AQ9UPW8 1703 aa10.18□□□□□ -0.78
BDNF-217ENST00000533131 TRHP20396 242 aaPredicted RBP10.18□□□□□ -0.78
BDNF-217ENST00000533131 RAD21O60216 631 aa10.17□□□□□ -0.78
BDNF-217ENST00000533131 BRD2P25440 801 aaKnown RBP10.17□□□□□ -0.78
BDNF-217ENST00000533131 USP35Q9P2H5 1018 aa10.17□□□□□ -0.78
BDNF-217ENST00000533131 RBM25P49756 843 aaKnown RBP10.16□□□□□ -0.78
BDNF-217ENST00000533131 NPM1P06748 294 aaKnown RBP eCLIP10.15□□□□□ -0.78
BDNF-217ENST00000533131 NEFLP07196 543 aa10.14□□□□□ -0.79
BDNF-217ENST00000533131 KCTD17Q8N5Z5 321 aa10.13□□□□□ -0.79
BDNF-217ENST00000533131 AEBP1Q8IUX7 1158 aa10.12□□□□□ -0.79
BDNF-217ENST00000533131 CNKSR2Q8WXI2 1034 aa10.1□□□□□ -0.79
BDNF-217ENST00000533131 PKD2Q13563 968 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms