RNA–Protein interactions for RNA: ENST00000532564.6

GMDS-AS1-210, humanhuman

TSL 3

Gene GMDS-AS1, Length 1,436 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-AS1-210ENST00000532564 AEBP2Q6ZN18 517 aaPredicted RBP30.11■■■□□ 2.41
GMDS-AS1-210ENST00000532564 CHIC1Q5VXU3 224 aa29.03■■■□□ 2.24
GMDS-AS1-210ENST00000532564 SENP3Q9H4L4 574 aaPredicted RBP25.59■■□□□ 1.69
GMDS-AS1-210ENST00000532564 PHF23Q9BUL5 403 aaPredicted RBP25.51■■□□□ 1.67
GMDS-AS1-210ENST00000532564 FOXD1Q16676 465 aa23.8■■□□□ 1.4
GMDS-AS1-210ENST00000532564 PLPPR3Q6T4P5 718 aa23.41■■□□□ 1.34
GMDS-AS1-210ENST00000532564 PPP6R1Q9UPN7 881 aa22.63■■□□□ 1.21
GMDS-AS1-210ENST00000532564 ADRA2BP18089 450 aa22.6■■□□□ 1.21
GMDS-AS1-210ENST00000532564 PIAS4Q8N2W9 510 aaPredicted RBP22.4■■□□□ 1.18
GMDS-AS1-210ENST00000532564 MSH5O43196 834 aa22.07■■□□□ 1.12
GMDS-AS1-210ENST00000532564 POTEDQ86YR6 584 aa20.77■□□□□ 0.91
GMDS-AS1-210ENST00000532564 SCAF1Q9H7N4 1312 aaKnown RBP20.62■□□□□ 0.89
GMDS-AS1-210ENST00000532564 MAPK8IP2Q13387 824 aaPredicted RBP20.61■□□□□ 0.89
GMDS-AS1-210ENST00000532564 PPP4R3CPQ6ZMV5 832 aa20.6■□□□□ 0.89
GMDS-AS1-210ENST00000532564 DMRT2Q9Y5R5 561 aa20.36■□□□□ 0.85
GMDS-AS1-210ENST00000532564 CNKSR2Q8WXI2 1034 aa20.08■□□□□ 0.8
GMDS-AS1-210ENST00000532564 NCBP3Q53F19 620 aaKnown RBP19.93■□□□□ 0.78
GMDS-AS1-210ENST00000532564 HOXD11P31277 338 aaPredicted RBP19.77■□□□□ 0.76
GMDS-AS1-210ENST00000532564 RNF216Q9NWF9 866 aaPredicted RBP19.77■□□□□ 0.76
GMDS-AS1-210ENST00000532564 KCNA4P22459 653 aa19.74■□□□□ 0.75
GMDS-AS1-210ENST00000532564 NPM3O75607 178 aaKnown RBP19.68■□□□□ 0.74
GMDS-AS1-210ENST00000532564 NISCHQ9Y2I1 1504 aa19.66■□□□□ 0.74
GMDS-AS1-210ENST00000532564 DCAF8L1A6NGE4 600 aa19.58■□□□□ 0.72
GMDS-AS1-210ENST00000532564 DNAJC5BQ9UF47 199 aa19.05■□□□□ 0.64
GMDS-AS1-210ENST00000532564 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.91■□□□□ 0.621e-6■■□□□ 11.9
GMDS-AS1-210ENST00000532564 RNF39Q9H2S5 420 aa18.89■□□□□ 0.61
GMDS-AS1-210ENST00000532564 SLC4A1APQ9BWU0 796 aaKnown RBP18.72■□□□□ 0.59
GMDS-AS1-210ENST00000532564 CACNB1Q02641 598 aaPredicted RBP18.68■□□□□ 0.58
GMDS-AS1-210ENST00000532564 SLC4A2P04920 1241 aa18.66■□□□□ 0.58
GMDS-AS1-210ENST00000532564 C1QBPQ07021 282 aaKnown RBP18.62■□□□□ 0.57
GMDS-AS1-210ENST00000532564 U3KPZ7 1027 aaPredicted RBP18.55■□□□□ 0.56
GMDS-AS1-210ENST00000532564 FOXD4L1Q9NU39 408 aa18.25■□□□□ 0.51
GMDS-AS1-210ENST00000532564 MYCNP04198 464 aaPredicted RBP18.17■□□□□ 0.5
GMDS-AS1-210ENST00000532564 ZBTB22O15209 634 aa18.16■□□□□ 0.5
GMDS-AS1-210ENST00000532564 SPINK5Q9NQ38 1064 aaPredicted RBP18.16■□□□□ 0.5
GMDS-AS1-210ENST00000532564 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.15■□□□□ 0.5
GMDS-AS1-210ENST00000532564 HNRNPUL2Q1KMD3 747 aaKnown RBP18.15■□□□□ 0.5
GMDS-AS1-210ENST00000532564 CAPN15O75808 1086 aa18.11■□□□□ 0.49
GMDS-AS1-210ENST00000532564 SAMD1Q6SPF0 538 aaPredicted RBP18.08■□□□□ 0.49
GMDS-AS1-210ENST00000532564 APLP2Q06481 763 aa18.05■□□□□ 0.48
GMDS-AS1-210ENST00000532564 TRHP20396 242 aaPredicted RBP17.94■□□□□ 0.46
GMDS-AS1-210ENST00000532564 ZNF219Q9P2Y4 722 aaPredicted RBP17.89■□□□□ 0.45
GMDS-AS1-210ENST00000532564 DSG3P32926 999 aa17.86■□□□□ 0.45
GMDS-AS1-210ENST00000532564 EHMT2Q96KQ7 1210 aa17.83■□□□□ 0.45
GMDS-AS1-210ENST00000532564 ABCB7O75027 752 aa17.76■□□□□ 0.43
GMDS-AS1-210ENST00000532564 ATF5Q9Y2D1 282 aaPredicted RBP17.74■□□□□ 0.43
GMDS-AS1-210ENST00000532564 CSRNP3Q8WYN3 585 aa17.72■□□□□ 0.43
GMDS-AS1-210ENST00000532564 ATXN8OSP0DMR3 200 aa17.59■□□□□ 0.41
GMDS-AS1-210ENST00000532564 POLA2Q14181 598 aa17.54■□□□□ 0.4
GMDS-AS1-210ENST00000532564 CCDC180Q9P1Z9 1646 aa17.35■□□□□ 0.37
GMDS-AS1-210ENST00000532564 ZBTB12Q9Y330 459 aaPredicted RBP17.19■□□□□ 0.34
GMDS-AS1-210ENST00000532564 RBM42Q9BTD8 480 aaKnown RBP17.01■□□□□ 0.31
GMDS-AS1-210ENST00000532564 FBLN2P98095 1184 aa17■□□□□ 0.31
GMDS-AS1-210ENST00000532564 OSCARQ8IYS5 282 aa17■□□□□ 0.31
GMDS-AS1-210ENST00000532564 MKRN4PQ13434 485 aaPredicted RBP16.94■□□□□ 0.3
GMDS-AS1-210ENST00000532564 AKT1S1Q96B36 256 aa16.72■□□□□ 0.27
GMDS-AS1-210ENST00000532564 SPDYE2BA6NHP3 402 aa16.7■□□□□ 0.26
GMDS-AS1-210ENST00000532564 SPDYE6P0CI01 402 aa16.7■□□□□ 0.26
GMDS-AS1-210ENST00000532564 SPDYE2Q495Y8 402 aa16.7■□□□□ 0.26
GMDS-AS1-210ENST00000532564 ABCC9O60706 1549 aa16.62■□□□□ 0.25
GMDS-AS1-210ENST00000532564 ZNF692Q9BU19 519 aaPredicted RBP16.61■□□□□ 0.25
GMDS-AS1-210ENST00000532564 REM2Q8IYK8 340 aaPredicted RBP16.58■□□□□ 0.24
GMDS-AS1-210ENST00000532564 SSUH2Q9Y2M2 353 aa16.53■□□□□ 0.24
GMDS-AS1-210ENST00000532564 CHRDL2Q6WN34 429 aa16.47■□□□□ 0.23
GMDS-AS1-210ENST00000532564 ZCCHC6Q5VYS8 1495 aaKnown RBP16.45■□□□□ 0.22
GMDS-AS1-210ENST00000532564 PITPNM1O00562 1244 aa16.42■□□□□ 0.22
GMDS-AS1-210ENST00000532564 SPDYE4A6NLX3 237 aa16.38■□□□□ 0.21
GMDS-AS1-210ENST00000532564 PABPN1Q86U42 306 aaKnown RBP eCLIP16.38■□□□□ 0.21
GMDS-AS1-210ENST00000532564 DCAF8L2P0C7V8 631 aa16.37■□□□□ 0.21
GMDS-AS1-210ENST00000532564 POTEHQ6S545 545 aa16.37■□□□□ 0.21
GMDS-AS1-210ENST00000532564 SPDYE1Q8NFV5 336 aaPredicted RBP16.31■□□□□ 0.2
GMDS-AS1-210ENST00000532564 CLEC11AQ9Y240 323 aa16.3■□□□□ 0.2
GMDS-AS1-210ENST00000532564 DCAF1Q9Y4B6 1507 aa16.23■□□□□ 0.19
GMDS-AS1-210ENST00000532564 PIP4P2Q8N4L2 257 aa16.19■□□□□ 0.18
GMDS-AS1-210ENST00000532564 NACADO15069 1562 aa16.17■□□□□ 0.18
GMDS-AS1-210ENST00000532564 FXR2P51116 673 aaKnown RBP eCLIP16.14■□□□□ 0.17
GMDS-AS1-210ENST00000532564 RB1CC1Q8TDY2 1594 aa16.13■□□□□ 0.17
GMDS-AS1-210ENST00000532564 MYO15BQ96JP2 1530 aa16.13■□□□□ 0.17
GMDS-AS1-210ENST00000532564 FKBP8Q14318 412 aa16.09■□□□□ 0.17
GMDS-AS1-210ENST00000532564 PRR29P0C7W0 189 aa16.07■□□□□ 0.16
GMDS-AS1-210ENST00000532564 PROM2Q8N271 834 aa16.02■□□□□ 0.15
GMDS-AS1-210ENST00000532564 PRKAR2AP13861 404 aaKnown RBP16■□□□□ 0.15
GMDS-AS1-210ENST00000532564 STAG3Q9UJ98 1225 aa15.99■□□□□ 0.15
GMDS-AS1-210ENST00000532564 CHADLQ6NUI6 762 aa15.95■□□□□ 0.14
GMDS-AS1-210ENST00000532564 SCRIBQ14160 1630 aa15.92■□□□□ 0.14
GMDS-AS1-210ENST00000532564 SHROOM4Q9ULL8 1493 aa15.89■□□□□ 0.13
GMDS-AS1-210ENST00000532564 UNC13AQ9UPW8 1703 aa15.89■□□□□ 0.13
GMDS-AS1-210ENST00000532564 HAX1O00165 279 aa15.77■□□□□ 0.12
GMDS-AS1-210ENST00000532564 CREBZFQ9NS37 354 aa15.77■□□□□ 0.12
GMDS-AS1-210ENST00000532564 FARP1Q9Y4F1 1045 aaPredicted RBP15.72■□□□□ 0.11
GMDS-AS1-210ENST00000532564 BICRAQ9NZM4 1560 aa15.62■□□□□ 0.09
GMDS-AS1-210ENST00000532564 C19orf67A6NJJ6 358 aa15.61■□□□□ 0.09
GMDS-AS1-210ENST00000532564 EVX2Q03828 476 aa15.6■□□□□ 0.09
GMDS-AS1-210ENST00000532564 MIER1Q8N108 512 aa15.58■□□□□ 0.08
GMDS-AS1-210ENST00000532564 SP7Q8TDD2 431 aaPredicted RBP15.57■□□□□ 0.08
GMDS-AS1-210ENST00000532564 FBXO3Q9UK99 471 aa15.56■□□□□ 0.08
GMDS-AS1-210ENST00000532564 MNX1P50219 401 aaPredicted RBP15.55■□□□□ 0.08
GMDS-AS1-210ENST00000532564 PLCD3Q8N3E9 789 aa15.53■□□□□ 0.08
GMDS-AS1-210ENST00000532564 CD44P16070 742 aaKnown RBP15.52■□□□□ 0.08
GMDS-AS1-210ENST00000532564 PLEKHG5O94827 1062 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms