RNA–Protein interactions for RNA: ENST00000532517.5

PHLDB1-220, Transcript of pleckstrin homology like domain family B member 1, humanhuman

TSL 1 (best)

Gene PHLDB1, Length 5,242 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDB1-220ENST00000532517 DCAF8L2P0C7V8 631 aa24.88■■□□□ 1.57
PHLDB1-220ENST00000532517 PELP1Q8IZL8 1130 aaKnown RBP24.18■■□□□ 1.46
PHLDB1-220ENST00000532517 SUPT5HO00267 1087 aaKnown RBP23.83■■□□□ 1.4
PHLDB1-220ENST00000532517 APLP2Q06481 763 aa23.22■■□□□ 1.31
PHLDB1-220ENST00000532517 EHMT2Q96KQ7 1210 aa23.2■■□□□ 1.3
PHLDB1-220ENST00000532517 ERICH6Q7L0X2 663 aa23.12■■□□□ 1.29
PHLDB1-220ENST00000532517 CCER1Q8TC90 406 aaPredicted RBP23.06■■□□□ 1.28
PHLDB1-220ENST00000532517 SHROOM4Q9ULL8 1493 aa23■■□□□ 1.27
PHLDB1-220ENST00000532517 CENPBP07199 599 aaPredicted RBP22.97■■□□□ 1.27
PHLDB1-220ENST00000532517 NISCHQ9Y2I1 1504 aa22.91■■□□□ 1.26
PHLDB1-220ENST00000532517 MYT1Q01538 1121 aa22.82■■□□□ 1.24
PHLDB1-220ENST00000532517 FAM9AQ8IZU1 332 aaPredicted RBP22.76■■□□□ 1.23
PHLDB1-220ENST00000532517 ZEB1P37275 1124 aaPredicted RBP22.71■■□□□ 1.23
PHLDB1-220ENST00000532517 PCGF6Q9BYE7 350 aa22.7■■□□□ 1.22
PHLDB1-220ENST00000532517 TTBK1Q5TCY1 1321 aaPredicted RBP22.53■■□□□ 1.2
PHLDB1-220ENST00000532517 NEFLP07196 543 aa22.51■■□□□ 1.19
PHLDB1-220ENST00000532517 YTHDC1Q96MU7 727 aaKnown RBP22.15■■□□□ 1.14
PHLDB1-220ENST00000532517 RANGAP1P46060 587 aaPredicted RBP22.14■■□□□ 1.13
PHLDB1-220ENST00000532517 TRIM41Q8WV44 630 aa22.08■■□□□ 1.13
PHLDB1-220ENST00000532517 ATP1B4Q9UN42 357 aaPredicted RBP22.08■■□□□ 1.13
PHLDB1-220ENST00000532517 DAXXQ9UER7 740 aaPredicted RBP22.02■■□□□ 1.11
PHLDB1-220ENST00000532517 UBTFP17480 764 aaKnown RBP21.95■■□□□ 1.1
PHLDB1-220ENST00000532517 TRIM26Q12899 539 aaPredicted RBP21.66■■□□□ 1.06
PHLDB1-220ENST00000532517 HRCP23327 699 aa21.58■■□□□ 1.04
PHLDB1-220ENST00000532517 RTL5Q5HYW3 569 aaPredicted RBP21.56■■□□□ 1.04
PHLDB1-220ENST00000532517 PPARGC1BQ86YN6 1023 aaKnown RBP21.49■■□□□ 1.03
PHLDB1-220ENST00000532517 POLR3GLQ9BT43 218 aa21.49■■□□□ 1.03
PHLDB1-220ENST00000532517 ZNF316A6NFI3 1004 aaPredicted RBP21.44■■□□□ 1.02
PHLDB1-220ENST00000532517 ITGAEP38570 1179 aa21.34■■□□□ 1.01
PHLDB1-220ENST00000532517 CLSPNQ9HAW4 1339 aa21.33■■□□□ 1
PHLDB1-220ENST00000532517 MYT1LQ9UL68 1186 aa21.3■■□□□ 1
PHLDB1-220ENST00000532517 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.22■□□□□ 0.99
PHLDB1-220ENST00000532517 HNRNPUL2Q1KMD3 747 aaKnown RBP21.22■□□□□ 0.99
PHLDB1-220ENST00000532517 CNGB1Q14028 1251 aaPredicted RBP21.21■□□□□ 0.99
PHLDB1-220ENST00000532517 DIEXFQ68CQ4 756 aaKnown RBP21.13■□□□□ 0.97
PHLDB1-220ENST00000532517 SLC4A1APQ9BWU0 796 aaKnown RBP21.08■□□□□ 0.97
PHLDB1-220ENST00000532517 LOC105371045A0A1W2PR82 267 aa20.94■□□□□ 0.94
PHLDB1-220ENST00000532517 CDK11AQ9UQ88 783 aaPredicted RBP20.94■□□□□ 0.94
PHLDB1-220ENST00000532517 ZBTB47Q9UFB7 747 aaPredicted RBP20.89■□□□□ 0.94
PHLDB1-220ENST00000532517 BCANQ96GW7 911 aa20.84■□□□□ 0.93
PHLDB1-220ENST00000532517 CHIC1Q5VXU3 224 aa20.84■□□□□ 0.93
PHLDB1-220ENST00000532517 GTF3C3Q9Y5Q9 886 aa20.83■□□□□ 0.93
PHLDB1-220ENST00000532517 ANP32CO43423 234 aa20.79■□□□□ 0.92
PHLDB1-220ENST00000532517 FAM50AQ14320 339 aaKnown RBP20.73■□□□□ 0.91
PHLDB1-220ENST00000532517 TRIM52Q96A61 297 aa20.73■□□□□ 0.91
PHLDB1-220ENST00000532517 ANP32AP39687 249 aaKnown RBP20.66■□□□□ 0.9
PHLDB1-220ENST00000532517 NEUROD1Q13562 356 aa20.66■□□□□ 0.9
PHLDB1-220ENST00000532517 CANXP27824 592 aaKnown RBP20.63■□□□□ 0.89
PHLDB1-220ENST00000532517 ANP32BQ92688 251 aaKnown RBP20.54■□□□□ 0.88
PHLDB1-220ENST00000532517 ZNF326Q5BKZ1 582 aaKnown RBP20.53■□□□□ 0.88
PHLDB1-220ENST00000532517 NEFMP07197 916 aa20.52■□□□□ 0.88
PHLDB1-220ENST00000532517 EIF5BO60841 1220 aaKnown RBP20.51■□□□□ 0.87
PHLDB1-220ENST00000532517 ACIN1Q9UKV3 1341 aaKnown RBP20.47■□□□□ 0.87
PHLDB1-220ENST00000532517 GLIPR1L2Q4G1C9 344 aa20.47■□□□□ 0.87
PHLDB1-220ENST00000532517 BCL11AQ9H165 835 aa20.44■□□□□ 0.86
PHLDB1-220ENST00000532517 SLC24A1O60721 1099 aa20.41■□□□□ 0.86
PHLDB1-220ENST00000532517 NPM2Q86SE8 214 aaKnown RBP20.4■□□□□ 0.86
PHLDB1-220ENST00000532517 HSP90AA1P07900 732 aaKnown RBP20.33■□□□□ 0.85
PHLDB1-220ENST00000532517 UPF2Q9HAU5 1272 aaKnown RBP20.3■□□□□ 0.84
PHLDB1-220ENST00000532517 FKBP8Q14318 412 aa20.21■□□□□ 0.83
PHLDB1-220ENST00000532517 HNRNPUQ00839 825 aaKnown RBP eCLIP20.07■□□□□ 0.8
PHLDB1-220ENST00000532517 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.04■□□□□ 0.8
PHLDB1-220ENST00000532517 CCDC136Q96JN2 1154 aa20.02■□□□□ 0.8
PHLDB1-220ENST00000532517 NBR1Q14596 966 aa20■□□□□ 0.79
PHLDB1-220ENST00000532517 TONSLQ96HA7 1378 aa19.99■□□□□ 0.79
PHLDB1-220ENST00000532517 FAM9BQ8IZU0 186 aa19.96■□□□□ 0.79
PHLDB1-220ENST00000532517 FBLN2P98095 1184 aa19.95■□□□□ 0.78
PHLDB1-220ENST00000532517 ARXQ96QS3 562 aa19.9■□□□□ 0.78
PHLDB1-220ENST00000532517 ZNF777Q9ULD5 760 aaPredicted RBP19.9■□□□□ 0.78
PHLDB1-220ENST00000532517 DDX10Q13206 875 aaKnown RBP19.88■□□□□ 0.77
PHLDB1-220ENST00000532517 TMC1Q8TDI8 760 aa19.88■□□□□ 0.77
PHLDB1-220ENST00000532517 CSRNP3Q8WYN3 585 aa19.87■□□□□ 0.77
PHLDB1-220ENST00000532517 CDK11BP21127 795 aaKnown RBP19.87■□□□□ 0.77
PHLDB1-220ENST00000532517 P3H3Q8IVL6 736 aa19.86■□□□□ 0.77
PHLDB1-220ENST00000532517 ANP32EQ9BTT0 268 aa19.86■□□□□ 0.77
PHLDB1-220ENST00000532517 SALL2Q9Y467 1007 aaPredicted RBP19.84■□□□□ 0.77
PHLDB1-220ENST00000532517 ARID3CA6NKF2 412 aa19.82■□□□□ 0.76
PHLDB1-220ENST00000532517 ESF1Q9H501 851 aaKnown RBP19.82■□□□□ 0.76
PHLDB1-220ENST00000532517 TRIM44Q96DX7 344 aaPredicted RBP19.81■□□□□ 0.76
PHLDB1-220ENST00000532517 WDR43Q15061 677 aaKnown RBP eCLIP19.81■□□□□ 0.76
PHLDB1-220ENST00000532517 ABCC9O60706 1549 aa19.8■□□□□ 0.76
PHLDB1-220ENST00000532517 DDRGK1Q96HY6 314 aa19.79■□□□□ 0.76
PHLDB1-220ENST00000532517 TNNT2P45379 298 aaPredicted RBP19.79■□□□□ 0.76
PHLDB1-220ENST00000532517 BECN1Q14457 450 aa19.78■□□□□ 0.76
PHLDB1-220ENST00000532517 MYH16Q9H6N6 1097 aa19.78■□□□□ 0.76
PHLDB1-220ENST00000532517 STAG3Q9UJ98 1225 aa19.78■□□□□ 0.76
PHLDB1-220ENST00000532517 CHGAP10645 457 aaKnown RBP19.77■□□□□ 0.76
PHLDB1-220ENST00000532517 NCLP19338 710 aaKnown RBP19.77■□□□□ 0.75
PHLDB1-220ENST00000532517 MRS2Q9HD23 443 aa19.76■□□□□ 0.75
PHLDB1-220ENST00000532517 GOLGA6L22H0YM25 854 aa19.74■□□□□ 0.75
PHLDB1-220ENST00000532517 PABPN1Q86U42 306 aaKnown RBP eCLIP19.73■□□□□ 0.75
PHLDB1-220ENST00000532517 ERICH6BQ5W0A0 696 aa19.63■□□□□ 0.73
PHLDB1-220ENST00000532517 PTMAP06454 111 aaKnown RBP19.6■□□□□ 0.73
PHLDB1-220ENST00000532517 IRX6P78412 446 aaPredicted RBP19.6■□□□□ 0.73
PHLDB1-220ENST00000532517 PPM1GO15355 546 aaPredicted RBP19.58■□□□□ 0.73
PHLDB1-220ENST00000532517 SCAF1Q9H7N4 1312 aaKnown RBP19.58■□□□□ 0.72
PHLDB1-220ENST00000532517 ZRSR1Q15695 479 aaKnown RBP19.58■□□□□ 0.72
PHLDB1-220ENST00000532517 DCAF1Q9Y4B6 1507 aa19.54■□□□□ 0.72
PHLDB1-220ENST00000532517 DNTTIP2Q5QJE6 756 aaKnown RBP19.54■□□□□ 0.72
PHLDB1-220ENST00000532517 MIER1Q8N108 512 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms