RNA–Protein interactions for RNA: ENST00000532485.5

ACER3-212, Transcript of alkaline ceramidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACER3, Length 7,378 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-212ENST00000532485 NISCHQ9Y2I1 1504 aa16.15■□□□□ 0.18
ACER3-212ENST00000532485 DCAF8L2P0C7V8 631 aa16.02■□□□□ 0.15
ACER3-212ENST00000532485 SHROOM4Q9ULL8 1493 aa15.36■□□□□ 0.05
ACER3-212ENST00000532485 SUPT5HO00267 1087 aaKnown RBP15.27■□□□□ 0.04
ACER3-212ENST00000532485 EHMT2Q96KQ7 1210 aa14.81□□□□□ -0.04
ACER3-212ENST00000532485 FAM9AQ8IZU1 332 aaPredicted RBP14.39□□□□□ -0.11
ACER3-212ENST00000532485 TTBK1Q5TCY1 1321 aaPredicted RBP14.19□□□□□ -0.14
ACER3-212ENST00000532485 RANGAP1P46060 587 aaPredicted RBP14.06□□□□□ -0.16
ACER3-212ENST00000532485 PCGF6Q9BYE7 350 aa14.04□□□□□ -0.16
ACER3-212ENST00000532485 TRIM41Q8WV44 630 aa13.96□□□□□ -0.17
ACER3-212ENST00000532485 PPARGC1BQ86YN6 1023 aaKnown RBP13.93□□□□□ -0.18
ACER3-212ENST00000532485 ABCC9O60706 1549 aa13.92□□□□□ -0.18
ACER3-212ENST00000532485 LOC105371045A0A1W2PR82 267 aa13.89□□□□□ -0.19
ACER3-212ENST00000532485 PABPN1Q86U42 306 aaKnown RBP eCLIP13.8□□□□□ -0.2
ACER3-212ENST00000532485 CHIC1Q5VXU3 224 aa13.77□□□□□ -0.2
ACER3-212ENST00000532485 UBTFP17480 764 aaKnown RBP13.69□□□□□ -0.22
ACER3-212ENST00000532485 APLP2Q06481 763 aa13.64□□□□□ -0.23
ACER3-212ENST00000532485 ATP1B4Q9UN42 357 aaPredicted RBP13.63□□□□□ -0.23
ACER3-212ENST00000532485 CCER1Q8TC90 406 aaPredicted RBP13.47□□□□□ -0.25
ACER3-212ENST00000532485 SCRIBQ14160 1630 aa13.4□□□□□ -0.26
ACER3-212ENST00000532485 ZCCHC6Q5VYS8 1495 aaKnown RBP13.39□□□□□ -0.27
ACER3-212ENST00000532485 ITGAEP38570 1179 aa13.34□□□□□ -0.27
ACER3-212ENST00000532485 TRIM26Q12899 539 aaPredicted RBP13.3□□□□□ -0.28
ACER3-212ENST00000532485 HNRNPUL2Q1KMD3 747 aaKnown RBP13.27□□□□□ -0.28
ACER3-212ENST00000532485 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.22□□□□□ -0.29
ACER3-212ENST00000532485 CCDC180Q9P1Z9 1646 aa13.2□□□□□ -0.3
ACER3-212ENST00000532485 HRCP23327 699 aa13.2□□□□□ -0.3
ACER3-212ENST00000532485 YTHDC1Q96MU7 727 aaKnown RBP13.16□□□□□ -0.3
ACER3-212ENST00000532485 MYO15BQ96JP2 1530 aa13.08□□□□□ -0.32
ACER3-212ENST00000532485 ZEB1P37275 1124 aaPredicted RBP13.06□□□□□ -0.32
ACER3-212ENST00000532485 P3H3Q8IVL6 736 aa13.04□□□□□ -0.32
ACER3-212ENST00000532485 ARID3CA6NKF2 412 aa13□□□□□ -0.33
ACER3-212ENST00000532485 CNGB1Q14028 1251 aaPredicted RBP12.99□□□□□ -0.33
ACER3-212ENST00000532485 RSF1Q96T23 1441 aaPredicted RBP12.96□□□□□ -0.34
ACER3-212ENST00000532485 CSRNP3Q8WYN3 585 aa12.94□□□□□ -0.34
ACER3-212ENST00000532485 FBLN2P98095 1184 aa12.94□□□□□ -0.34
ACER3-212ENST00000532485 CECR2Q9BXF3 1484 aa12.93□□□□□ -0.34
ACER3-212ENST00000532485 FAM50AQ14320 339 aaKnown RBP12.92□□□□□ -0.34
ACER3-212ENST00000532485 POLR3GLQ9BT43 218 aa12.86□□□□□ -0.35
ACER3-212ENST00000532485 MYT1LQ9UL68 1186 aa12.83□□□□□ -0.36
ACER3-212ENST00000532485 NEUROD1Q13562 356 aa12.82□□□□□ -0.36
ACER3-212ENST00000532485 CENPBP07199 599 aaPredicted RBP12.81□□□□□ -0.36
ACER3-212ENST00000532485 RB1CC1Q8TDY2 1594 aa12.8□□□□□ -0.36
ACER3-212ENST00000532485 DIEXFQ68CQ4 756 aaKnown RBP12.74□□□□□ -0.37
ACER3-212ENST00000532485 NACADO15069 1562 aa12.72□□□□□ -0.37
ACER3-212ENST00000532485 DCAF1Q9Y4B6 1507 aa12.7□□□□□ -0.38
ACER3-212ENST00000532485 MROH2BQ7Z745 1585 aa12.7□□□□□ -0.38
ACER3-212ENST00000532485 TRIM52Q96A61 297 aa12.69□□□□□ -0.38
ACER3-212ENST00000532485 ZNF326Q5BKZ1 582 aaKnown RBP12.62□□□□□ -0.39
ACER3-212ENST00000532485 ZNF777Q9ULD5 760 aaPredicted RBP12.6□□□□□ -0.39
ACER3-212ENST00000532485 WIZO95785 1651 aa12.6□□□□□ -0.39
ACER3-212ENST00000532485 ABCC8Q09428 1581 aa12.59□□□□□ -0.39
ACER3-212ENST00000532485 BAZ1BQ9UIG0 1483 aaKnown RBP12.58□□□□□ -0.4
ACER3-212ENST00000532485 SOGA1O94964 1423 aa12.58□□□□□ -0.4
ACER3-212ENST00000532485 PELP1Q8IZL8 1130 aaKnown RBP12.58□□□□□ -0.4
ACER3-212ENST00000532485 CHIC2Q9UKJ5 165 aa12.55□□□□□ -0.4
ACER3-212ENST00000532485 WRNQ14191 1432 aaPredicted RBP eCLIP12.54□□□□□ -0.4
ACER3-212ENST00000532485 BAZ1AQ9NRL2 1556 aaPredicted RBP12.53□□□□□ -0.4
ACER3-212ENST00000532485 HIRIP3Q9BW71 556 aaPredicted RBP12.52□□□□□ -0.41
ACER3-212ENST00000532485 CCDC88BA6NC98 1476 aa12.51□□□□□ -0.41
ACER3-212ENST00000532485 CEP162Q5TB80 1403 aa12.51□□□□□ -0.41
ACER3-212ENST00000532485 CLIP1P30622 1438 aa12.49□□□□□ -0.41
ACER3-212ENST00000532485 ZNF316A6NFI3 1004 aaPredicted RBP12.47□□□□□ -0.41
ACER3-212ENST00000532485 SLC4A1APQ9BWU0 796 aaKnown RBP12.47□□□□□ -0.41
ACER3-212ENST00000532485 NEFLP07196 543 aa12.47□□□□□ -0.41
ACER3-212ENST00000532485 BCANQ96GW7 911 aa12.44□□□□□ -0.42
ACER3-212ENST00000532485 GTF3C3Q9Y5Q9 886 aa12.43□□□□□ -0.42
ACER3-212ENST00000532485 SENP3Q9H4L4 574 aaPredicted RBP12.39□□□□□ -0.43
ACER3-212ENST00000532485 CHMP7Q8WUX9 453 aaPredicted RBP12.39□□□□□ -0.43
ACER3-212ENST00000532485 RUSC2Q8N2Y8 1516 aa12.38□□□□□ -0.43
ACER3-212ENST00000532485 RRP7BPQ9NSQ0 103 aa12.37□□□□□ -0.43
ACER3-212ENST00000532485 GOLGA3Q08378 1498 aa12.36□□□□□ -0.43
ACER3-212ENST00000532485 DDX10Q13206 875 aaKnown RBP12.35□□□□□ -0.43
ACER3-212ENST00000532485 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.33□□□□□ -0.44
ACER3-212ENST00000532485 SENP3-EIF4A1A0A087X0R7 540 aa12.32□□□□□ -0.44
ACER3-212ENST00000532485 MTUS2Q5JR59 1369 aa12.32□□□□□ -0.44
ACER3-212ENST00000532485 KANK4Q5T7N3 995 aaPredicted RBP12.32□□□□□ -0.44
ACER3-212ENST00000532485 TNIKQ9UKE5 1360 aa12.31□□□□□ -0.44
ACER3-212ENST00000532485 PLPPR3Q6T4P5 718 aa12.31□□□□□ -0.44
ACER3-212ENST00000532485 KCNH8Q96L42 1107 aa12.31□□□□□ -0.44
ACER3-212ENST00000532485 KIF27Q86VH2 1401 aa12.3□□□□□ -0.44
ACER3-212ENST00000532485 CUX2O14529 1486 aa12.29□□□□□ -0.44
ACER3-212ENST00000532485 MIER1Q8N108 512 aa12.28□□□□□ -0.44
ACER3-212ENST00000532485 TDRD9Q8NDG6 1382 aaKnown RBP12.27□□□□□ -0.44
ACER3-212ENST00000532485 ANP32CO43423 234 aa12.27□□□□□ -0.45
ACER3-212ENST00000532485 SIN3AQ96ST3 1273 aa12.26□□□□□ -0.45
ACER3-212ENST00000532485 KDM2AQ9Y2K7 1162 aa12.26□□□□□ -0.45
ACER3-212ENST00000532485 ERICH6Q7L0X2 663 aa12.26□□□□□ -0.45
ACER3-212ENST00000532485 CDK11AQ9UQ88 783 aaPredicted RBP12.26□□□□□ -0.45
ACER3-212ENST00000532485 CEP164Q9UPV0 1460 aa12.26□□□□□ -0.45
ACER3-212ENST00000532485 SMARCA4P51532 1647 aa12.25□□□□□ -0.45
ACER3-212ENST00000532485 ATAD2BQ9ULI0 1458 aa12.24□□□□□ -0.45
ACER3-212ENST00000532485 EEA1Q15075 1411 aa12.23□□□□□ -0.45
ACER3-212ENST00000532485 TOP2AP11388 1531 aaKnown RBP12.23□□□□□ -0.45
ACER3-212ENST00000532485 TONSLQ96HA7 1378 aa12.23□□□□□ -0.45
ACER3-212ENST00000532485 CARMIL1Q5VZK9 1371 aa12.22□□□□□ -0.45
ACER3-212ENST00000532485 CHGAP10645 457 aaKnown RBP12.22□□□□□ -0.45
ACER3-212ENST00000532485 ACIN1Q9UKV3 1341 aaKnown RBP12.22□□□□□ -0.45
ACER3-212ENST00000532485 SALL2Q9Y467 1007 aaPredicted RBP12.21□□□□□ -0.45
ACER3-212ENST00000532485 ERCC6Q03468 1493 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms