RNA–Protein interactions for RNA: ENST00000532449.5

CHEK1-213, Transcript of checkpoint kinase 1, humanhuman

TSL 2 BASIC

Gene CHEK1, Length 4,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-213ENST00000532449 NISCHQ9Y2I1 1504 aa19.35■□□□□ 0.69
CHEK1-213ENST00000532449 SUPT5HO00267 1087 aaKnown RBP18.67■□□□□ 0.58
CHEK1-213ENST00000532449 SHROOM4Q9ULL8 1493 aa18.6■□□□□ 0.57
CHEK1-213ENST00000532449 DCAF8L2P0C7V8 631 aa18.59■□□□□ 0.57
CHEK1-213ENST00000532449 EHMT2Q96KQ7 1210 aa18.14■□□□□ 0.5
CHEK1-213ENST00000532449 PCGF6Q9BYE7 350 aa18.06■□□□□ 0.48
CHEK1-213ENST00000532449 PPARGC1BQ86YN6 1023 aaKnown RBP17.8■□□□□ 0.44
CHEK1-213ENST00000532449 FAM9AQ8IZU1 332 aaPredicted RBP17.6■□□□□ 0.41
CHEK1-213ENST00000532449 TTBK1Q5TCY1 1321 aaPredicted RBP17.53■□□□□ 0.4
CHEK1-213ENST00000532449 HRCP23327 699 aa17.47■□□□□ 0.39
CHEK1-213ENST00000532449 LOC105371045A0A1W2PR82 267 aa17.43■□□□□ 0.38
CHEK1-213ENST00000532449 CHIC1Q5VXU3 224 aa17.22■□□□□ 0.35
CHEK1-213ENST00000532449 YTHDC1Q96MU7 727 aaKnown RBP17■□□□□ 0.31
CHEK1-213ENST00000532449 CCER1Q8TC90 406 aaPredicted RBP16.91■□□□□ 0.3
CHEK1-213ENST00000532449 TRIM41Q8WV44 630 aa16.9■□□□□ 0.3
CHEK1-213ENST00000532449 RANGAP1P46060 587 aaPredicted RBP16.87■□□□□ 0.29
CHEK1-213ENST00000532449 TRIM26Q12899 539 aaPredicted RBP16.86■□□□□ 0.29
CHEK1-213ENST00000532449 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.79■□□□□ 0.28
CHEK1-213ENST00000532449 MYO15BQ96JP2 1530 aa16.75■□□□□ 0.27
CHEK1-213ENST00000532449 ZEB1P37275 1124 aaPredicted RBP16.62■□□□□ 0.25
CHEK1-213ENST00000532449 CENPBP07199 599 aaPredicted RBP16.59■□□□□ 0.25
CHEK1-213ENST00000532449 PELP1Q8IZL8 1130 aaKnown RBP16.59■□□□□ 0.25
CHEK1-213ENST00000532449 SCAF1Q9H7N4 1312 aaKnown RBP16.56■□□□□ 0.24
CHEK1-213ENST00000532449 GTF3C3Q9Y5Q9 886 aa16.54■□□□□ 0.24
CHEK1-213ENST00000532449 CCDC180Q9P1Z9 1646 aa16.5■□□□□ 0.23
CHEK1-213ENST00000532449 UBTFP17480 764 aaKnown RBP16.44■□□□□ 0.22
CHEK1-213ENST00000532449 DIEXFQ68CQ4 756 aaKnown RBP16.42■□□□□ 0.22
CHEK1-213ENST00000532449 HNRNPUL2Q1KMD3 747 aaKnown RBP16.42■□□□□ 0.22
CHEK1-213ENST00000532449 NEUROD1Q13562 356 aa16.37■□□□□ 0.21
CHEK1-213ENST00000532449 ABCC9O60706 1549 aa16.34■□□□□ 0.21
CHEK1-213ENST00000532449 APLP2Q06481 763 aa16.31■□□□□ 0.2
CHEK1-213ENST00000532449 ACIN1Q9UKV3 1341 aaKnown RBP16.27■□□□□ 0.19
CHEK1-213ENST00000532449 ITGAEP38570 1179 aa16.23■□□□□ 0.19
CHEK1-213ENST00000532449 ZCCHC6Q5VYS8 1495 aaKnown RBP16.18■□□□□ 0.18
CHEK1-213ENST00000532449 BCANQ96GW7 911 aa16.17■□□□□ 0.18
CHEK1-213ENST00000532449 ATP1B4Q9UN42 357 aaPredicted RBP16.09■□□□□ 0.17
CHEK1-213ENST00000532449 CNGB1Q14028 1251 aaPredicted RBP16.03■□□□□ 0.16
CHEK1-213ENST00000532449 DCAF1Q9Y4B6 1507 aa16.02■□□□□ 0.16
CHEK1-213ENST00000532449 MIER1Q8N108 512 aa15.92■□□□□ 0.14
CHEK1-213ENST00000532449 ZNF316A6NFI3 1004 aaPredicted RBP15.92■□□□□ 0.14
CHEK1-213ENST00000532449 ERICH6Q7L0X2 663 aa15.86■□□□□ 0.13
CHEK1-213ENST00000532449 MYT1Q01538 1121 aa15.82■□□□□ 0.12
CHEK1-213ENST00000532449 NEFLP07196 543 aa15.79■□□□□ 0.12
CHEK1-213ENST00000532449 SCRIBQ14160 1630 aa15.71■□□□□ 0.11
CHEK1-213ENST00000532449 HIRIP3Q9BW71 556 aaPredicted RBP15.7■□□□□ 0.1
CHEK1-213ENST00000532449 PABPN1Q86U42 306 aaKnown RBP eCLIP15.69■□□□□ 0.1
CHEK1-213ENST00000532449 POLR3GLQ9BT43 218 aa15.66■□□□□ 0.1
CHEK1-213ENST00000532449 FKBP8Q14318 412 aa15.59■□□□□ 0.09
CHEK1-213ENST00000532449 TRIM52Q96A61 297 aa15.58■□□□□ 0.09
CHEK1-213ENST00000532449 CSRNP3Q8WYN3 585 aa15.57■□□□□ 0.08
CHEK1-213ENST00000532449 IRX6P78412 446 aaPredicted RBP15.56■□□□□ 0.08
CHEK1-213ENST00000532449 NACADO15069 1562 aa15.56■□□□□ 0.08
CHEK1-213ENST00000532449 SENP3-EIF4A1A0A087X0R7 540 aa15.56■□□□□ 0.08
CHEK1-213ENST00000532449 FAM50AQ14320 339 aaKnown RBP15.56■□□□□ 0.08
CHEK1-213ENST00000532449 DDX10Q13206 875 aaKnown RBP15.53■□□□□ 0.08
CHEK1-213ENST00000532449 RB1CC1Q8TDY2 1594 aa15.51■□□□□ 0.07
CHEK1-213ENST00000532449 P3H3Q8IVL6 736 aa15.49■□□□□ 0.07
CHEK1-213ENST00000532449 RSF1Q96T23 1441 aaPredicted RBP15.49■□□□□ 0.07
CHEK1-213ENST00000532449 KCNH8Q96L42 1107 aa15.4■□□□□ 0.06
CHEK1-213ENST00000532449 SUPT16HQ9Y5B9 1047 aaKnown RBP15.39■□□□□ 0.05
CHEK1-213ENST00000532449 ARID3CA6NKF2 412 aa15.37■□□□□ 0.05
CHEK1-213ENST00000532449 CEP162Q5TB80 1403 aa15.35■□□□□ 0.05
CHEK1-213ENST00000532449 CECR2Q9BXF3 1484 aa15.3■□□□□ 0.04
CHEK1-213ENST00000532449 ANP32CO43423 234 aa15.29■□□□□ 0.04
CHEK1-213ENST00000532449 NBR1Q14596 966 aa15.28■□□□□ 0.04
CHEK1-213ENST00000532449 SOGA1O94964 1423 aa15.27■□□□□ 0.03
CHEK1-213ENST00000532449 HNRNPUQ00839 825 aaKnown RBP eCLIP15.27■□□□□ 0.03
CHEK1-213ENST00000532449 ZNF326Q5BKZ1 582 aaKnown RBP15.26■□□□□ 0.03
CHEK1-213ENST00000532449 SIN3AQ96ST3 1273 aa15.24■□□□□ 0.03
CHEK1-213ENST00000532449 ANP32EQ9BTT0 268 aa15.24■□□□□ 0.03
CHEK1-213ENST00000532449 BCL11AQ9H165 835 aa15.22■□□□□ 0.03
CHEK1-213ENST00000532449 TSHZ2Q9NRE2 1034 aa15.22■□□□□ 0.03
CHEK1-213ENST00000532449 CDK11AQ9UQ88 783 aaPredicted RBP15.21■□□□□ 0.02
CHEK1-213ENST00000532449 FAM9BQ8IZU0 186 aa15.2■□□□□ 0.02
CHEK1-213ENST00000532449 NPM2Q86SE8 214 aaKnown RBP15.2■□□□□ 0.02
CHEK1-213ENST00000532449 SALL2Q9Y467 1007 aaPredicted RBP15.19■□□□□ 0.02
CHEK1-213ENST00000532449 ABCC8Q09428 1581 aa15.16■□□□□ 0.02
CHEK1-213ENST00000532449 CLIP1P30622 1438 aa15.14■□□□□ 0.01
CHEK1-213ENST00000532449 CCDC88BA6NC98 1476 aa15.12■□□□□ 0.01
CHEK1-213ENST00000532449 KANK4Q5T7N3 995 aaPredicted RBP15.1■□□□□ 0.01
CHEK1-213ENST00000532449 CHIC2Q9UKJ5 165 aa15.1■□□□□ 0.01
CHEK1-213ENST00000532449 RTL5Q5HYW3 569 aaPredicted RBP15.09■□□□□ 0.01
CHEK1-213ENST00000532449 MROH2BQ7Z745 1585 aa15.08■□□□□ 0
CHEK1-213ENST00000532449 RUSC2Q8N2Y8 1516 aa15.07■□□□□ 0
CHEK1-213ENST00000532449 RBM19Q9Y4C8 960 aaKnown RBP15.07■□□□□ 0
CHEK1-213ENST00000532449 RTN4Q9NQC3 1192 aaKnown RBP15.06■□□□□ 0
CHEK1-213ENST00000532449 UNC13AQ9UPW8 1703 aa15.04■□□□□ -0
CHEK1-213ENST00000532449 BICRAQ9NZM4 1560 aa15.01□□□□□ -0.01
CHEK1-213ENST00000532449 B4GALNT3Q6L9W6 998 aa15□□□□□ -0.01
CHEK1-213ENST00000532449 TNIKQ9UKE5 1360 aa15□□□□□ -0.01
CHEK1-213ENST00000532449 TONSLQ96HA7 1378 aa14.95□□□□□ -0.02
CHEK1-213ENST00000532449 DAXXQ9UER7 740 aaPredicted RBP14.94□□□□□ -0.02
CHEK1-213ENST00000532449 MRS2Q9HD23 443 aa14.93□□□□□ -0.02
CHEK1-213ENST00000532449 WIZO95785 1651 aa14.92□□□□□ -0.02
CHEK1-213ENST00000532449 GOLGA3Q08378 1498 aa14.92□□□□□ -0.02
CHEK1-213ENST00000532449 EIF5BO60841 1220 aaKnown RBP14.92□□□□□ -0.02
CHEK1-213ENST00000532449 RRP7BPQ9NSQ0 103 aa14.92□□□□□ -0.02
CHEK1-213ENST00000532449 BAZ1AQ9NRL2 1556 aaPredicted RBP14.91□□□□□ -0.02
CHEK1-213ENST00000532449 ARXQ96QS3 562 aa14.9□□□□□ -0.02
CHEK1-213ENST00000532449 CLSPNQ9HAW4 1339 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms