RNA–Protein interactions for RNA: ENST00000531959.5

PHF21A-215, Transcript of PHD finger protein 21A, human

TSL 5

Gene PHF21A, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHF21A-215	ENST00000531959	AEBP2	Q6ZN18	517 aa	Predicted RBP	21.15	■□□□□ 0.98
PHF21A-215	ENST00000531959	CHIC1	Q5VXU3	224 aa		20.45	■□□□□ 0.86
PHF21A-215	ENST00000531959	SENP3	Q9H4L4	574 aa	Predicted RBP	18.13	■□□□□ 0.49
PHF21A-215	ENST00000531959	PHF23	Q9BUL5	403 aa	Predicted RBP	17.88	■□□□□ 0.45
PHF21A-215	ENST00000531959	FOXD1	Q16676	465 aa		16.77	■□□□□ 0.28
PHF21A-215	ENST00000531959	PLPPR3	Q6T4P5	718 aa		16.51	■□□□□ 0.23
PHF21A-215	ENST00000531959	PPP6R1	Q9UPN7	881 aa		15.85	■□□□□ 0.13
PHF21A-215	ENST00000531959	ADRA2B	P18089	450 aa		15.82	■□□□□ 0.12
PHF21A-215	ENST00000531959	PIAS4	Q8N2W9	510 aa	Predicted RBP	15.76	■□□□□ 0.11
PHF21A-215	ENST00000531959	MSH5	O43196	834 aa		15.69	■□□□□ 0.1
PHF21A-215	ENST00000531959	POTED	Q86YR6	584 aa		14.72	□□□□□ -0.05
PHF21A-215	ENST00000531959	SCAF1	Q9H7N4	1312 aa	Known RBP	14.64	□□□□□ -0.07
PHF21A-215	ENST00000531959	PPP4R3CP	Q6ZMV5	832 aa		14.46	□□□□□ -0.09
PHF21A-215	ENST00000531959	MAPK8IP2	Q13387	824 aa	Predicted RBP	14.42	□□□□□ -0.1
PHF21A-215	ENST00000531959	DMRT2	Q9Y5R5	561 aa		14.39	□□□□□ -0.11
PHF21A-215	ENST00000531959	CNKSR2	Q8WXI2	1034 aa		14.17	□□□□□ -0.14
PHF21A-215	ENST00000531959	NCBP3	Q53F19	620 aa	Known RBP	14.07	□□□□□ -0.16
PHF21A-215	ENST00000531959	HOXD11	P31277	338 aa	Predicted RBP	13.99	□□□□□ -0.17
PHF21A-215	ENST00000531959	RNF216	Q9NWF9	866 aa	Predicted RBP	13.97	□□□□□ -0.17
PHF21A-215	ENST00000531959	NPM3	O75607	178 aa	Known RBP	13.78	□□□□□ -0.2
PHF21A-215	ENST00000531959	KCNA4	P22459	653 aa		13.73	□□□□□ -0.21
PHF21A-215	ENST00000531959	DCAF8L1	A6NGE4	600 aa		13.71	□□□□□ -0.21
PHF21A-215	ENST00000531959	DNAJC5B	Q9UF47	199 aa		13.57	□□□□□ -0.24
PHF21A-215	ENST00000531959	RNF39	Q9H2S5	420 aa		13.37	□□□□□ -0.27
PHF21A-215	ENST00000531959	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
PHF21A-215	ENST00000531959	C1QBP	Q07021	282 aa	Known RBP	13.24	□□□□□ -0.29
PHF21A-215	ENST00000531959	CACNB1	Q02641	598 aa	Predicted RBP	13.21	□□□□□ -0.29
PHF21A-215	ENST00000531959	SLC4A2	P04920	1241 aa		13.07	□□□□□ -0.32
PHF21A-215	ENST00000531959	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.07	□□□□□ -0.32
PHF21A-215	ENST00000531959		U3KPZ7	1027 aa	Predicted RBP	13.04	□□□□□ -0.32
PHF21A-215	ENST00000531959	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	12.89	□□□□□ -0.35
PHF21A-215	ENST00000531959	HNRNPUL2	Q1KMD3	747 aa	Known RBP	12.89	□□□□□ -0.35
PHF21A-215	ENST00000531959	APLP2	Q06481	763 aa		12.85	□□□□□ -0.35
PHF21A-215	ENST00000531959	MYCN	P04198	464 aa	Predicted RBP	12.8	□□□□□ -0.36
PHF21A-215	ENST00000531959	SAMD1	Q6SPF0	538 aa	Predicted RBP	12.8	□□□□□ -0.36
PHF21A-215	ENST00000531959	FOXD4L1	Q9NU39	408 aa		12.8	□□□□□ -0.36
PHF21A-215	ENST00000531959	CAPN15	O75808	1086 aa		12.72	□□□□□ -0.37
PHF21A-215	ENST00000531959	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.71	□□□□□ -0.37
PHF21A-215	ENST00000531959	ZNF219	Q9P2Y4	722 aa	Predicted RBP	12.66	□□□□□ -0.38
PHF21A-215	ENST00000531959	ZBTB22	O15209	634 aa		12.61	□□□□□ -0.39
PHF21A-215	ENST00000531959	DSG3	P32926	999 aa		12.59	□□□□□ -0.39
PHF21A-215	ENST00000531959	TRH	P20396	242 aa	Predicted RBP	12.56	□□□□□ -0.4
PHF21A-215	ENST00000531959	ATXN8OS	P0DMR3	200 aa		12.44	□□□□□ -0.42
PHF21A-215	ENST00000531959	ABCB7	O75027	752 aa		12.4	□□□□□ -0.42
PHF21A-215	ENST00000531959	ATF5	Q9Y2D1	282 aa	Predicted RBP	12.35	□□□□□ -0.43
PHF21A-215	ENST00000531959	POLA2	Q14181	598 aa		12.31	□□□□□ -0.44
PHF21A-215	ENST00000531959	CSRNP3	Q8WYN3	585 aa		12.31	□□□□□ -0.44
PHF21A-215	ENST00000531959	EHMT2	Q96KQ7	1210 aa		12.28	□□□□□ -0.44
PHF21A-215	ENST00000531959	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.21	□□□□□ -0.45
PHF21A-215	ENST00000531959	RBM42	Q9BTD8	480 aa	Known RBP	12.1	□□□□□ -0.47
PHF21A-215	ENST00000531959	FBLN2	P98095	1184 aa		11.99	□□□□□ -0.49
PHF21A-215	ENST00000531959	OSCAR	Q8IYS5	282 aa		11.9	□□□□□ -0.5
PHF21A-215	ENST00000531959	AKT1S1	Q96B36	256 aa		11.85	□□□□□ -0.51
PHF21A-215	ENST00000531959	MKRN4P	Q13434	485 aa	Predicted RBP	11.84	□□□□□ -0.51
PHF21A-215	ENST00000531959	SPDYE2B	A6NHP3	402 aa		11.82	□□□□□ -0.52
PHF21A-215	ENST00000531959	SPDYE6	P0CI01	402 aa		11.82	□□□□□ -0.52
PHF21A-215	ENST00000531959	SPDYE2	Q495Y8	402 aa		11.82	□□□□□ -0.52
PHF21A-215	ENST00000531959	REM2	Q8IYK8	340 aa	Predicted RBP	11.68	□□□□□ -0.54
PHF21A-215	ENST00000531959	ZNF692	Q9BU19	519 aa	Predicted RBP	11.66	□□□□□ -0.54
PHF21A-215	ENST00000531959	SSUH2	Q9Y2M2	353 aa		11.66	□□□□□ -0.54
PHF21A-215	ENST00000531959	CHRDL2	Q6WN34	429 aa		11.65	□□□□□ -0.54
PHF21A-215	ENST00000531959	POTEH	Q6S545	545 aa		11.61	□□□□□ -0.55
PHF21A-215	ENST00000531959	PITPNM1	O00562	1244 aa		11.55	□□□□□ -0.56
PHF21A-215	ENST00000531959	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.53	□□□□□ -0.56
PHF21A-215	ENST00000531959	PABPN1	Q86U42	306 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
PHF21A-215	ENST00000531959	SPDYE4	A6NLX3	237 aa		11.47	□□□□□ -0.57
PHF21A-215	ENST00000531959	FXR2	P51116	673 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
PHF21A-215	ENST00000531959	CLEC11A	Q9Y240	323 aa		11.41	□□□□□ -0.58
PHF21A-215	ENST00000531959	PIP4P2	Q8N4L2	257 aa		11.4	□□□□□ -0.58
PHF21A-215	ENST00000531959	STAG3	Q9UJ98	1225 aa		11.34	□□□□□ -0.59
PHF21A-215	ENST00000531959	PRR29	P0C7W0	189 aa		11.31	□□□□□ -0.6
PHF21A-215	ENST00000531959	PROM2	Q8N271	834 aa		11.28	□□□□□ -0.6
PHF21A-215	ENST00000531959	PRKAR2A	P13861	404 aa	Known RBP	11.25	□□□□□ -0.61
PHF21A-215	ENST00000531959	FKBP8	Q14318	412 aa		11.16	□□□□□ -0.62
PHF21A-215	ENST00000531959	CHADL	Q6NUI6	762 aa		11.13	□□□□□ -0.63
PHF21A-215	ENST00000531959	HAX1	O00165	279 aa		11.12	□□□□□ -0.63
PHF21A-215	ENST00000531959	CREBZF	Q9NS37	354 aa		11.07	□□□□□ -0.64
PHF21A-215	ENST00000531959	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.07	□□□□□ -0.64
PHF21A-215	ENST00000531959	C19orf67	A6NJJ6	358 aa		11.04	□□□□□ -0.64
PHF21A-215	ENST00000531959	SP7	Q8TDD2	431 aa	Predicted RBP	11.04	□□□□□ -0.64
PHF21A-215	ENST00000531959	PLEKHG5	O94827	1062 aa		10.96	□□□□□ -0.65
PHF21A-215	ENST00000531959	NPM1	P06748	294 aa	Known RBP eCLIP	10.96	□□□□□ -0.65
PHF21A-215	ENST00000531959	FBXO3	Q9UK99	471 aa		10.96	□□□□□ -0.65
PHF21A-215	ENST00000531959	CD44	P16070	742 aa	Known RBP	10.93	□□□□□ -0.66
PHF21A-215	ENST00000531959	MNX1	P50219	401 aa	Predicted RBP	10.92	□□□□□ -0.66
PHF21A-215	ENST00000531959	EVX2	Q03828	476 aa		10.92	□□□□□ -0.66
PHF21A-215	ENST00000531959	MIER1	Q8N108	512 aa		10.9	□□□□□ -0.66
PHF21A-215	ENST00000531959	CLCN6	P51797	869 aa		10.87	□□□□□ -0.67
PHF21A-215	ENST00000531959	PLCD3	Q8N3E9	789 aa		10.87	□□□□□ -0.67
PHF21A-215	ENST00000531959	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.87	□□□□□ -0.67
PHF21A-215	ENST00000531959	PAK3	O75914	559 aa	Predicted RBP	10.85	□□□□□ -0.67
PHF21A-215	ENST00000531959	ZNF579	Q8NAF0	562 aa	Known RBP	10.81	□□□□□ -0.68
PHF21A-215	ENST00000531959	ZRANB1	Q9UGI0	708 aa		10.8	□□□□□ -0.68
PHF21A-215	ENST00000531959	GABBR2	O75899	941 aa		10.77	□□□□□ -0.69
PHF21A-215	ENST00000531959	VASP	P50552	380 aa	Predicted RBP	10.75	□□□□□ -0.69
PHF21A-215	ENST00000531959	NUBP1	P53384	320 aa		10.66	□□□□□ -0.7
PHF21A-215	ENST00000531959	RASEF	Q8IZ41	740 aa		10.66	□□□□□ -0.7
PHF21A-215	ENST00000531959	TSPYL2	Q9H2G4	693 aa	Predicted RBP	10.66	□□□□□ -0.7
PHF21A-215	ENST00000531959	CCDC61	Q9Y6R9	512 aa		10.65	□□□□□ -0.7
PHF21A-215	ENST00000531959	PHF12	Q96QT6	1004 aa		10.64	□□□□□ -0.71

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