RNA–Protein interactions for RNA: ENST00000530866.5

LTBP3-218, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 3,756 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-218ENST00000530866 NISCHQ9Y2I1 1504 aa24.49■■□□□ 1.51
LTBP3-218ENST00000530866 DCAF8L2P0C7V8 631 aa22.69■■□□□ 1.22
LTBP3-218ENST00000530866 SHROOM4Q9ULL8 1493 aa22.42■■□□□ 1.18
LTBP3-218ENST00000530866 SUPT5HO00267 1087 aaKnown RBP22.13■■□□□ 1.13
LTBP3-218ENST00000530866 EHMT2Q96KQ7 1210 aa21.12■□□□□ 0.97
LTBP3-218ENST00000530866 PCGF6Q9BYE7 350 aa20.8■□□□□ 0.92
LTBP3-218ENST00000530866 FAM9AQ8IZU1 332 aaPredicted RBP20.72■□□□□ 0.91
LTBP3-218ENST00000530866 ABCC9O60706 1549 aa20.67■□□□□ 0.9
LTBP3-218ENST00000530866 PELP1Q8IZL8 1130 aaKnown RBP20.59■□□□□ 0.89
LTBP3-218ENST00000530866 CCDC180Q9P1Z9 1646 aa20.57■□□□□ 0.88
LTBP3-218ENST00000530866 CHIC1Q5VXU3 224 aa20.55■□□□□ 0.88
LTBP3-218ENST00000530866 LOC105371045A0A1W2PR82 267 aa20.48■□□□□ 0.87
LTBP3-218ENST00000530866 ZCCHC6Q5VYS8 1495 aaKnown RBP20.43■□□□□ 0.86
LTBP3-218ENST00000530866 TTBK1Q5TCY1 1321 aaPredicted RBP20.35■□□□□ 0.85
LTBP3-218ENST00000530866 PPARGC1BQ86YN6 1023 aaKnown RBP20.31■□□□□ 0.84
LTBP3-218ENST00000530866 TRIM41Q8WV44 630 aa20.27■□□□□ 0.84
LTBP3-218ENST00000530866 HRCP23327 699 aa20.09■□□□□ 0.81
LTBP3-218ENST00000530866 MYT1Q01538 1121 aa20.05■□□□□ 0.8
LTBP3-218ENST00000530866 PABPN1Q86U42 306 aaKnown RBP eCLIP20.04■□□□□ 0.85e-8■■■□□ 15.1
LTBP3-218ENST00000530866 MYO15BQ96JP2 1530 aa19.99■□□□□ 0.79
LTBP3-218ENST00000530866 RANGAP1P46060 587 aaPredicted RBP19.97■□□□□ 0.79
LTBP3-218ENST00000530866 SCRIBQ14160 1630 aa19.97■□□□□ 0.79
LTBP3-218ENST00000530866 TRIM26Q12899 539 aaPredicted RBP19.72■□□□□ 0.75
LTBP3-218ENST00000530866 DCAF1Q9Y4B6 1507 aa19.67■□□□□ 0.74
LTBP3-218ENST00000530866 UBTFP17480 764 aaKnown RBP19.65■□□□□ 0.74
LTBP3-218ENST00000530866 CCER1Q8TC90 406 aaPredicted RBP19.61■□□□□ 0.73
LTBP3-218ENST00000530866 NACADO15069 1562 aa19.57■□□□□ 0.72
LTBP3-218ENST00000530866 RSF1Q96T23 1441 aaPredicted RBP19.56■□□□□ 0.72
LTBP3-218ENST00000530866 RB1CC1Q8TDY2 1594 aa19.54■□□□□ 0.72
LTBP3-218ENST00000530866 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.5■□□□□ 0.71
LTBP3-218ENST00000530866 CECR2Q9BXF3 1484 aa19.5■□□□□ 0.71
LTBP3-218ENST00000530866 YTHDC1Q96MU7 727 aaKnown RBP19.32■□□□□ 0.68
LTBP3-218ENST00000530866 ZEB1P37275 1124 aaPredicted RBP19.31■□□□□ 0.68
LTBP3-218ENST00000530866 APLP2Q06481 763 aa19.3■□□□□ 0.68
LTBP3-218ENST00000530866 SCAF1Q9H7N4 1312 aaKnown RBP19.29■□□□□ 0.68
LTBP3-218ENST00000530866 HNRNPUL2Q1KMD3 747 aaKnown RBP19.22■□□□□ 0.67
LTBP3-218ENST00000530866 MROH2BQ7Z745 1585 aa19.2■□□□□ 0.66
LTBP3-218ENST00000530866 ATP1B4Q9UN42 357 aaPredicted RBP19.19■□□□□ 0.66
LTBP3-218ENST00000530866 CENPBP07199 599 aaPredicted RBP19.15■□□□□ 0.66
LTBP3-218ENST00000530866 GTF3C3Q9Y5Q9 886 aa19.08■□□□□ 0.65
LTBP3-218ENST00000530866 ITGAEP38570 1179 aa19.07■□□□□ 0.64
LTBP3-218ENST00000530866 WIZO95785 1651 aa19.03■□□□□ 0.64
LTBP3-218ENST00000530866 CSRNP3Q8WYN3 585 aa19.02■□□□□ 0.64
LTBP3-218ENST00000530866 BAZ1AQ9NRL2 1556 aaPredicted RBP18.96■□□□□ 0.63
LTBP3-218ENST00000530866 DIEXFQ68CQ4 756 aaKnown RBP18.92■□□□□ 0.62
LTBP3-218ENST00000530866 ABCC8Q09428 1581 aa18.91■□□□□ 0.62
LTBP3-218ENST00000530866 SOGA1O94964 1423 aa18.85■□□□□ 0.61
LTBP3-218ENST00000530866 CCDC88BA6NC98 1476 aa18.81■□□□□ 0.6
LTBP3-218ENST00000530866 P3H3Q8IVL6 736 aa18.79■□□□□ 0.6
LTBP3-218ENST00000530866 ACIN1Q9UKV3 1341 aaKnown RBP18.77■□□□□ 0.6
LTBP3-218ENST00000530866 BAZ1BQ9UIG0 1483 aaKnown RBP18.77■□□□□ 0.6
LTBP3-218ENST00000530866 NEUROD1Q13562 356 aa18.75■□□□□ 0.59
LTBP3-218ENST00000530866 BCL11AQ9H165 835 aa18.73■□□□□ 0.59
LTBP3-218ENST00000530866 RUSC2Q8N2Y8 1516 aa18.68■□□□□ 0.58
LTBP3-218ENST00000530866 CEP162Q5TB80 1403 aa18.66■□□□□ 0.58
LTBP3-218ENST00000530866 WRNQ14191 1432 aaPredicted RBP eCLIP18.65■□□□□ 0.58
LTBP3-218ENST00000530866 SMARCA4P51532 1647 aa18.64■□□□□ 0.57
LTBP3-218ENST00000530866 ARID3CA6NKF2 412 aa18.58■□□□□ 0.57
LTBP3-218ENST00000530866 ATAD2BQ9ULI0 1458 aa18.55■□□□□ 0.56
LTBP3-218ENST00000530866 TOP2AP11388 1531 aaKnown RBP18.54■□□□□ 0.56
LTBP3-218ENST00000530866 FAM50AQ14320 339 aaKnown RBP18.54■□□□□ 0.56
LTBP3-218ENST00000530866 ERICH6Q7L0X2 663 aa18.54■□□□□ 0.56
LTBP3-218ENST00000530866 ZNF316A6NFI3 1004 aaPredicted RBP18.52■□□□□ 0.55
LTBP3-218ENST00000530866 CLIP1P30622 1438 aa18.48■□□□□ 0.55
LTBP3-218ENST00000530866 BICRAQ9NZM4 1560 aa18.48■□□□□ 0.55
LTBP3-218ENST00000530866 SMARCA2P51531 1590 aa18.47■□□□□ 0.55
LTBP3-218ENST00000530866 CNGB1Q14028 1251 aaPredicted RBP18.47■□□□□ 0.55
LTBP3-218ENST00000530866 TNIKQ9UKE5 1360 aa18.42■□□□□ 0.54
LTBP3-218ENST00000530866 MIER1Q8N108 512 aa18.4■□□□□ 0.54
LTBP3-218ENST00000530866 GOLGA3Q08378 1498 aa18.4■□□□□ 0.54
LTBP3-218ENST00000530866 BCANQ96GW7 911 aa18.36■□□□□ 0.53
LTBP3-218ENST00000530866 UNC13AQ9UPW8 1703 aa18.36■□□□□ 0.53
LTBP3-218ENST00000530866 EIF4G1Q04637 1599 aaKnown RBP18.31■□□□□ 0.52
LTBP3-218ENST00000530866 KANK4Q5T7N3 995 aaPredicted RBP18.3■□□□□ 0.52
LTBP3-218ENST00000530866 PRKCSHP14314 528 aaPredicted RBP18.3■□□□□ 0.52
LTBP3-218ENST00000530866 HIRIP3Q9BW71 556 aaPredicted RBP18.29■□□□□ 0.52
LTBP3-218ENST00000530866 FBLN2P98095 1184 aa18.28■□□□□ 0.52
LTBP3-218ENST00000530866 RAPGEF2Q9Y4G8 1499 aa18.27■□□□□ 0.51
LTBP3-218ENST00000530866 CEP164Q9UPV0 1460 aa18.25■□□□□ 0.51
LTBP3-218ENST00000530866 EEA1Q15075 1411 aa18.25■□□□□ 0.51
LTBP3-218ENST00000530866 POLR3GLQ9BT43 218 aa18.2■□□□□ 0.5
LTBP3-218ENST00000530866 NCAPD3P42695 1498 aa18.19■□□□□ 0.5
LTBP3-218ENST00000530866 CADPSQ9ULU8 1353 aa18.17■□□□□ 0.5
LTBP3-218ENST00000530866 ANP32EQ9BTT0 268 aa18.17■□□□□ 0.5
LTBP3-218ENST00000530866 KIF27Q86VH2 1401 aa18.13■□□□□ 0.49
LTBP3-218ENST00000530866 CUX2O14529 1486 aa18.13■□□□□ 0.49
LTBP3-218ENST00000530866 SYNJ1O43426 1573 aa18.12■□□□□ 0.49
LTBP3-218ENST00000530866 CHIC2Q9UKJ5 165 aa18.11■□□□□ 0.49
LTBP3-218ENST00000530866 TRIM52Q96A61 297 aa18.1■□□□□ 0.49
LTBP3-218ENST00000530866 DNAJC5BQ9UF47 199 aa18.1■□□□□ 0.49
LTBP3-218ENST00000530866 DDX10Q13206 875 aaKnown RBP18.09■□□□□ 0.49
LTBP3-218ENST00000530866 VPS8Q8N3P4 1428 aa18.07■□□□□ 0.48
LTBP3-218ENST00000530866 NEFLP07196 543 aa18.06■□□□□ 0.48
LTBP3-218ENST00000530866 SIN3AQ96ST3 1273 aa18.02■□□□□ 0.48
LTBP3-218ENST00000530866 CC2D2AQ9P2K1 1620 aa18.01■□□□□ 0.47
LTBP3-218ENST00000530866 CARMIL1Q5VZK9 1371 aa18.01■□□□□ 0.47
LTBP3-218ENST00000530866 TDRD9Q8NDG6 1382 aaKnown RBP18■□□□□ 0.47
LTBP3-218ENST00000530866 ZNF777Q9ULD5 760 aaPredicted RBP17.97■□□□□ 0.47
LTBP3-218ENST00000530866 FANCD2Q9BXW9 1451 aa17.95■□□□□ 0.46
LTBP3-218ENST00000530866 ZNF326Q5BKZ1 582 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms