RNA–Protein interactions for RNA: ENST00000530720.1

CTNND1-226, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 832 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-226ENST00000530720 AEBP2Q6ZN18 517 aaPredicted RBP17.61■□□□□ 0.41
CTNND1-226ENST00000530720 CHIC1Q5VXU3 224 aa16.7■□□□□ 0.26
CTNND1-226ENST00000530720 SENP3Q9H4L4 574 aaPredicted RBP15.03■□□□□ -0
CTNND1-226ENST00000530720 PHF23Q9BUL5 403 aaPredicted RBP14.83□□□□□ -0.04
CTNND1-226ENST00000530720 FOXD1Q16676 465 aa14.01□□□□□ -0.17
CTNND1-226ENST00000530720 PLPPR3Q6T4P5 718 aa13.33□□□□□ -0.28
CTNND1-226ENST00000530720 MSH5O43196 834 aa13.12□□□□□ -0.31
CTNND1-226ENST00000530720 PPP6R1Q9UPN7 881 aa13.08□□□□□ -0.32
CTNND1-226ENST00000530720 PIAS4Q8N2W9 510 aaPredicted RBP13.07□□□□□ -0.32
CTNND1-226ENST00000530720 ADRA2BP18089 450 aa13.03□□□□□ -0.32
CTNND1-226ENST00000530720 POTEDQ86YR6 584 aa12.85□□□□□ -0.35
CTNND1-226ENST00000530720 MAPK8IP2Q13387 824 aaPredicted RBP11.97□□□□□ -0.49
CTNND1-226ENST00000530720 SCAF1Q9H7N4 1312 aaKnown RBP11.93□□□□□ -0.5
CTNND1-226ENST00000530720 DMRT2Q9Y5R5 561 aa11.91□□□□□ -0.5
CTNND1-226ENST00000530720 PPP4R3CPQ6ZMV5 832 aa11.68□□□□□ -0.54
CTNND1-226ENST00000530720 NISCHQ9Y2I1 1504 aa11.63□□□□□ -0.55
CTNND1-226ENST00000530720 HOXD11P31277 338 aaPredicted RBP11.48□□□□□ -0.57
CTNND1-226ENST00000530720 CNKSR2Q8WXI2 1034 aa11.48□□□□□ -0.57
CTNND1-226ENST00000530720 DCAF8L1A6NGE4 600 aa11.4□□□□□ -0.58
CTNND1-226ENST00000530720 RNF216Q9NWF9 866 aaPredicted RBP11.38□□□□□ -0.59
CTNND1-226ENST00000530720 CACNB1Q02641 598 aaPredicted RBP11.26□□□□□ -0.61
CTNND1-226ENST00000530720 NCBP3Q53F19 620 aaKnown RBP11.22□□□□□ -0.61
CTNND1-226ENST00000530720 RNF39Q9H2S5 420 aa11.19□□□□□ -0.62
CTNND1-226ENST00000530720 DNAJC5BQ9UF47 199 aa11.1□□□□□ -0.63
CTNND1-226ENST00000530720 NPM3O75607 178 aaKnown RBP11.06□□□□□ -0.64
CTNND1-226ENST00000530720 C1QBPQ07021 282 aaKnown RBP11.04□□□□□ -0.64
CTNND1-226ENST00000530720 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.91□□□□□ -0.664e-8■□□□□ 11.1
CTNND1-226ENST00000530720 KCNA4P22459 653 aa10.81□□□□□ -0.68
CTNND1-226ENST00000530720 U3KPZ7 1027 aaPredicted RBP10.69□□□□□ -0.7
CTNND1-226ENST00000530720 SLC4A2P04920 1241 aa10.57□□□□□ -0.72
CTNND1-226ENST00000530720 SPINK5Q9NQ38 1064 aaPredicted RBP10.53□□□□□ -0.72
CTNND1-226ENST00000530720 CAPN15O75808 1086 aa10.52□□□□□ -0.73
CTNND1-226ENST00000530720 ABCC9O60706 1549 aa10.48□□□□□ -0.73
CTNND1-226ENST00000530720 DSG3P32926 999 aa10.48□□□□□ -0.73
CTNND1-226ENST00000530720 CCDC180Q9P1Z9 1646 aa10.47□□□□□ -0.73
CTNND1-226ENST00000530720 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.39□□□□□ -0.75
CTNND1-226ENST00000530720 APLP2Q06481 763 aa10.39□□□□□ -0.75
CTNND1-226ENST00000530720 HNRNPUL2Q1KMD3 747 aaKnown RBP10.39□□□□□ -0.75
CTNND1-226ENST00000530720 TRHP20396 242 aaPredicted RBP10.34□□□□□ -0.75
CTNND1-226ENST00000530720 ZNF219Q9P2Y4 722 aaPredicted RBP10.33□□□□□ -0.76
CTNND1-226ENST00000530720 SAMD1Q6SPF0 538 aaPredicted RBP10.31□□□□□ -0.76
CTNND1-226ENST00000530720 ABCB7O75027 752 aa10.26□□□□□ -0.77
CTNND1-226ENST00000530720 MYCNP04198 464 aaPredicted RBP10.23□□□□□ -0.77
CTNND1-226ENST00000530720 SLC4A1APQ9BWU0 796 aaKnown RBP10.2□□□□□ -0.78
CTNND1-226ENST00000530720 FOXD4L1Q9NU39 408 aa10.11□□□□□ -0.79
CTNND1-226ENST00000530720 POTEHQ6S545 545 aa10.07□□□□□ -0.8
CTNND1-226ENST00000530720 POLA2Q14181 598 aa10.06□□□□□ -0.8
CTNND1-226ENST00000530720 RBM42Q9BTD8 480 aaKnown RBP10□□□□□ -0.81
CTNND1-226ENST00000530720 ATF5Q9Y2D1 282 aaPredicted RBP9.99□□□□□ -0.81
CTNND1-226ENST00000530720 RB1CC1Q8TDY2 1594 aa9.95□□□□□ -0.82
CTNND1-226ENST00000530720 ZBTB22O15209 634 aa9.93□□□□□ -0.82
CTNND1-226ENST00000530720 NACADO15069 1562 aa9.88□□□□□ -0.83
CTNND1-226ENST00000530720 ZBTB12Q9Y330 459 aaPredicted RBP9.86□□□□□ -0.83
CTNND1-226ENST00000530720 ATXN8OSP0DMR3 200 aa9.81□□□□□ -0.84
CTNND1-226ENST00000530720 UNC13AQ9UPW8 1703 aa9.81□□□□□ -0.84
CTNND1-226ENST00000530720 CHRDL2Q6WN34 429 aa9.78□□□□□ -0.84
CTNND1-226ENST00000530720 AKT1S1Q96B36 256 aa9.76□□□□□ -0.85
CTNND1-226ENST00000530720 MYO15BQ96JP2 1530 aa9.76□□□□□ -0.85
CTNND1-226ENST00000530720 BICRAQ9NZM4 1560 aa9.74□□□□□ -0.85
CTNND1-226ENST00000530720 OSCARQ8IYS5 282 aa9.73□□□□□ -0.85
CTNND1-226ENST00000530720 PABPN1Q86U42 306 aaKnown RBP eCLIP9.72□□□□□ -0.85
CTNND1-226ENST00000530720 DCAF8L2P0C7V8 631 aa9.69□□□□□ -0.86
CTNND1-226ENST00000530720 REM2Q8IYK8 340 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-226ENST00000530720 ZCCHC6Q5VYS8 1495 aaKnown RBP9.65□□□□□ -0.87
CTNND1-226ENST00000530720 DCAF1Q9Y4B6 1507 aa9.61□□□□□ -0.87
CTNND1-226ENST00000530720 FBLN2P98095 1184 aa9.6□□□□□ -0.87
CTNND1-226ENST00000530720 SPDYE2BA6NHP3 402 aa9.56□□□□□ -0.88
CTNND1-226ENST00000530720 PITPNM1O00562 1244 aa9.56□□□□□ -0.88
CTNND1-226ENST00000530720 SPDYE6P0CI01 402 aa9.56□□□□□ -0.88
CTNND1-226ENST00000530720 SPDYE2Q495Y8 402 aa9.56□□□□□ -0.88
CTNND1-226ENST00000530720 PIP4P2Q8N4L2 257 aa9.55□□□□□ -0.88
CTNND1-226ENST00000530720 SHROOM4Q9ULL8 1493 aa9.54□□□□□ -0.88
CTNND1-226ENST00000530720 MKRN4PQ13434 485 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-226ENST00000530720 SCRIBQ14160 1630 aa9.52□□□□□ -0.89
CTNND1-226ENST00000530720 FXR2P51116 673 aaKnown RBP eCLIP9.5□□□□□ -0.893e-7■■□□□ 12.1
CTNND1-226ENST00000530720 CC2D2AQ9P2K1 1620 aa9.49□□□□□ -0.89
CTNND1-226ENST00000530720 EIF4G1Q04637 1599 aaKnown RBP9.47□□□□□ -0.89
CTNND1-226ENST00000530720 CSRNP3Q8WYN3 585 aa9.47□□□□□ -0.89
CTNND1-226ENST00000530720 ZNF692Q9BU19 519 aaPredicted RBP9.44□□□□□ -0.9
CTNND1-226ENST00000530720 CECR2Q9BXF3 1484 aa9.44□□□□□ -0.9
CTNND1-226ENST00000530720 SP7Q8TDD2 431 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-226ENST00000530720 SSUH2Q9Y2M2 353 aa9.43□□□□□ -0.9
CTNND1-226ENST00000530720 SPDYE1Q8NFV5 336 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-226ENST00000530720 HAX1O00165 279 aa9.37□□□□□ -0.91
CTNND1-226ENST00000530720 CLEC11AQ9Y240 323 aa9.37□□□□□ -0.91
CTNND1-226ENST00000530720 PRKAR2AP13861 404 aaKnown RBP9.31□□□□□ -0.92
CTNND1-226ENST00000530720 EHMT2Q96KQ7 1210 aa9.3□□□□□ -0.92
CTNND1-226ENST00000530720 EVX2Q03828 476 aa9.26□□□□□ -0.93
CTNND1-226ENST00000530720 PRR29P0C7W0 189 aa9.22□□□□□ -0.93
CTNND1-226ENST00000530720 CHADLQ6NUI6 762 aa9.2□□□□□ -0.94
CTNND1-226ENST00000530720 C19orf67A6NJJ6 358 aa9.19□□□□□ -0.94
CTNND1-226ENST00000530720 NCAPD3P42695 1498 aa9.14□□□□□ -0.95
CTNND1-226ENST00000530720 ATAD2BQ9ULI0 1458 aa9.1□□□□□ -0.95
CTNND1-226ENST00000530720 SMARCA4P51532 1647 aa9.09□□□□□ -0.95
CTNND1-226ENST00000530720 DNAJC5Q9H3Z4 198 aa9.09□□□□□ -0.95
CTNND1-226ENST00000530720 HMGXB3Q12766 1538 aa9.07□□□□□ -0.96
CTNND1-226ENST00000530720 SPDYE4A6NLX3 237 aa9.07□□□□□ -0.96
CTNND1-226ENST00000530720 GABBR2O75899 941 aa9.06□□□□□ -0.96
CTNND1-226ENST00000530720 FARP1Q9Y4F1 1045 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-226ENST00000530720 CUX2O14529 1486 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms