RNA–Protein interactions for RNA: ENST00000530279.5

C11orf54-208, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-208ENST00000530279 AEBP2Q6ZN18 517 aaPredicted RBP25.93■■□□□ 1.74
C11orf54-208ENST00000530279 CHIC1Q5VXU3 224 aa24.28■■□□□ 1.48
C11orf54-208ENST00000530279 SENP3Q9H4L4 574 aaPredicted RBP22.28■■□□□ 1.16
C11orf54-208ENST00000530279 PHF23Q9BUL5 403 aaPredicted RBP21.89■■□□□ 1.09
C11orf54-208ENST00000530279 FOXD1Q16676 465 aa20.84■□□□□ 0.93
C11orf54-208ENST00000530279 POTEDQ86YR6 584 aa20.58■□□□□ 0.89
C11orf54-208ENST00000530279 MSH5O43196 834 aa19.81■□□□□ 0.76
C11orf54-208ENST00000530279 PIAS4Q8N2W9 510 aaPredicted RBP19.3■□□□□ 0.68
C11orf54-208ENST00000530279 PPP6R1Q9UPN7 881 aa18.9■□□□□ 0.62
C11orf54-208ENST00000530279 ADRA2BP18089 450 aa18.81■□□□□ 0.6
C11orf54-208ENST00000530279 PLPPR3Q6T4P5 718 aa18.81■□□□□ 0.6
C11orf54-208ENST00000530279 DMRT2Q9Y5R5 561 aa17.53■□□□□ 0.4
C11orf54-208ENST00000530279 MAPK8IP2Q13387 824 aaPredicted RBP17.51■□□□□ 0.39
C11orf54-208ENST00000530279 CACNB1Q02641 598 aaPredicted RBP17.47■□□□□ 0.39
C11orf54-208ENST00000530279 SCAF1Q9H7N4 1312 aaKnown RBP17.27■□□□□ 0.36
C11orf54-208ENST00000530279 DCAF8L1A6NGE4 600 aa16.9■□□□□ 0.3
C11orf54-208ENST00000530279 RNF39Q9H2S5 420 aa16.81■□□□□ 0.28
C11orf54-208ENST00000530279 HOXD11P31277 338 aaPredicted RBP16.6■□□□□ 0.25
C11orf54-208ENST00000530279 C1QBPQ07021 282 aaKnown RBP16.55■□□□□ 0.24
C11orf54-208ENST00000530279 PPP4R3CPQ6ZMV5 832 aa16.39■□□□□ 0.21
C11orf54-208ENST00000530279 RNF216Q9NWF9 866 aaPredicted RBP16.29■□□□□ 0.2
C11orf54-208ENST00000530279 CNKSR2Q8WXI2 1034 aa16.26■□□□□ 0.19
C11orf54-208ENST00000530279 DNAJC5BQ9UF47 199 aa16.19■□□□□ 0.18
C11orf54-208ENST00000530279 POTEHQ6S545 545 aa15.99■□□□□ 0.15
C11orf54-208ENST00000530279 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.85■□□□□ 0.13
C11orf54-208ENST00000530279 NCBP3Q53F19 620 aaKnown RBP15.56■□□□□ 0.08
C11orf54-208ENST00000530279 DSG3P32926 999 aa15.51■□□□□ 0.07
C11orf54-208ENST00000530279 CAPN15O75808 1086 aa15.45■□□□□ 0.06
C11orf54-208ENST00000530279 SPINK5Q9NQ38 1064 aaPredicted RBP15.4■□□□□ 0.06
C11orf54-208ENST00000530279 U3KPZ7 1027 aaPredicted RBP15.39■□□□□ 0.05
C11orf54-208ENST00000530279 NPM3O75607 178 aaKnown RBP15.29■□□□□ 0.04
C11orf54-208ENST00000530279 TRHP20396 242 aaPredicted RBP15.02■□□□□ -0
C11orf54-208ENST00000530279 ABCB7O75027 752 aa14.99□□□□□ -0.01
C11orf54-208ENST00000530279 ZNF219Q9P2Y4 722 aaPredicted RBP14.96□□□□□ -0.01
C11orf54-208ENST00000530279 APLP2Q06481 763 aa14.95□□□□□ -0.02
C11orf54-208ENST00000530279 RBM42Q9BTD8 480 aaKnown RBP14.85□□□□□ -0.03
C11orf54-208ENST00000530279 CHRDL2Q6WN34 429 aa14.79□□□□□ -0.04
C11orf54-208ENST00000530279 SLC4A2P04920 1241 aa14.78□□□□□ -0.04
C11orf54-208ENST00000530279 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.75□□□□□ -0.05
C11orf54-208ENST00000530279 HNRNPUL2Q1KMD3 747 aaKnown RBP14.75□□□□□ -0.05
C11orf54-208ENST00000530279 SP7Q8TDD2 431 aaPredicted RBP14.64□□□□□ -0.07
C11orf54-208ENST00000530279 SAMD1Q6SPF0 538 aaPredicted RBP14.61□□□□□ -0.07
C11orf54-208ENST00000530279 POLA2Q14181 598 aa14.44□□□□□ -0.1
C11orf54-208ENST00000530279 AKT1S1Q96B36 256 aa14.34□□□□□ -0.11
C11orf54-208ENST00000530279 KCNA4P22459 653 aa14.33□□□□□ -0.12
C11orf54-208ENST00000530279 PIP4P2Q8N4L2 257 aa14.27□□□□□ -0.13
C11orf54-208ENST00000530279 HAX1O00165 279 aa14.25□□□□□ -0.13
C11orf54-208ENST00000530279 REM2Q8IYK8 340 aaPredicted RBP14.19□□□□□ -0.14
C11orf54-208ENST00000530279 MYCNP04198 464 aaPredicted RBP14.18□□□□□ -0.14
C11orf54-208ENST00000530279 ZBTB12Q9Y330 459 aaPredicted RBP14.09□□□□□ -0.15
C11orf54-208ENST00000530279 FXR2P51116 673 aaKnown RBP eCLIP14.07□□□□□ -0.16
C11orf54-208ENST00000530279 PITPNM1O00562 1244 aa14.03□□□□□ -0.16
C11orf54-208ENST00000530279 OSCARQ8IYS5 282 aa13.98□□□□□ -0.17
C11orf54-208ENST00000530279 EVX2Q03828 476 aa13.97□□□□□ -0.17
C11orf54-208ENST00000530279 ATF5Q9Y2D1 282 aaPredicted RBP13.88□□□□□ -0.19
C11orf54-208ENST00000530279 LHX8Q68G74 356 aa13.73□□□□□ -0.21
C11orf54-208ENST00000530279 PRKAR2AP13861 404 aaKnown RBP13.69□□□□□ -0.22
C11orf54-208ENST00000530279 C19orf67A6NJJ6 358 aa13.65□□□□□ -0.22
C11orf54-208ENST00000530279 GABBR2O75899 941 aa13.64□□□□□ -0.23
C11orf54-208ENST00000530279 FOXD4L1Q9NU39 408 aa13.62□□□□□ -0.23
C11orf54-208ENST00000530279 SPDYE2BA6NHP3 402 aa13.59□□□□□ -0.23
C11orf54-208ENST00000530279 SPDYE6P0CI01 402 aa13.59□□□□□ -0.23
C11orf54-208ENST00000530279 SPDYE2Q495Y8 402 aa13.59□□□□□ -0.23
C11orf54-208ENST00000530279 CLEC11AQ9Y240 323 aa13.57□□□□□ -0.24
C11orf54-208ENST00000530279 SPDYE1Q8NFV5 336 aaPredicted RBP13.54□□□□□ -0.24
C11orf54-208ENST00000530279 PLSCR2Q9NRY7 297 aa13.49□□□□□ -0.25
C11orf54-208ENST00000530279 FBLN2P98095 1184 aa13.44□□□□□ -0.26
C11orf54-208ENST00000530279 SLC4A1APQ9BWU0 796 aaKnown RBP13.4□□□□□ -0.26
C11orf54-208ENST00000530279 CHADLQ6NUI6 762 aa13.36□□□□□ -0.27
C11orf54-208ENST00000530279 ZNF692Q9BU19 519 aaPredicted RBP13.33□□□□□ -0.28
C11orf54-208ENST00000530279 POTEIP0CG38 1075 aa13.32□□□□□ -0.28
C11orf54-208ENST00000530279 SSUH2Q9Y2M2 353 aa13.3□□□□□ -0.28
C11orf54-208ENST00000530279 ATXN8OSP0DMR3 200 aa13.29□□□□□ -0.28
C11orf54-208ENST00000530279 PRR29P0C7W0 189 aa13.25□□□□□ -0.29
C11orf54-208ENST00000530279 CD44P16070 742 aaKnown RBP13.21□□□□□ -0.29
C11orf54-208ENST00000530279 CLCN6P51797 869 aa13.2□□□□□ -0.3
C11orf54-208ENST00000530279 MKRN4PQ13434 485 aaPredicted RBP13.2□□□□□ -0.3
C11orf54-208ENST00000530279 DCBLD2Q96PD2 775 aa13.15□□□□□ -0.3
C11orf54-208ENST00000530279 ZBTB22O15209 634 aa13.12□□□□□ -0.31
C11orf54-208ENST00000530279 FARP1Q9Y4F1 1045 aaPredicted RBP13.1□□□□□ -0.31
C11orf54-208ENST00000530279 PABPN1Q86U42 306 aaKnown RBP eCLIP13.09□□□□□ -0.31
C11orf54-208ENST00000530279 OTUD5Q96G74 571 aa12.98□□□□□ -0.33
C11orf54-208ENST00000530279 POTEMA6NI47 508 aa12.97□□□□□ -0.33
C11orf54-208ENST00000530279 ZNF579Q8NAF0 562 aaKnown RBP12.95□□□□□ -0.34
C11orf54-208ENST00000530279 ZRANB1Q9UGI0 708 aa12.91□□□□□ -0.34
C11orf54-208ENST00000530279 POTEGQ6S5H5 508 aa12.9□□□□□ -0.34
C11orf54-208ENST00000530279 POTEB2H3BUK9 544 aa12.87□□□□□ -0.35
C11orf54-208ENST00000530279 GALR2O43603 387 aaPredicted RBP12.85□□□□□ -0.35
C11orf54-208ENST00000530279 PCDH10Q9P2E7 1040 aa12.83□□□□□ -0.36
C11orf54-208ENST00000530279 CREBZFQ9NS37 354 aa12.7□□□□□ -0.38
C11orf54-208ENST00000530279 PAK3O75914 559 aaPredicted RBP12.67□□□□□ -0.38
C11orf54-208ENST00000530279 PELP1Q8IZL8 1130 aaKnown RBP12.66□□□□□ -0.38
C11orf54-208ENST00000530279 PHF12Q96QT6 1004 aa12.64□□□□□ -0.39
C11orf54-208ENST00000530279 STAG3Q9UJ98 1225 aa12.6□□□□□ -0.39
C11orf54-208ENST00000530279 MAMSTRQ6ZN01 415 aa12.58□□□□□ -0.4
C11orf54-208ENST00000530279 METRNQ9UJH8 293 aa12.58□□□□□ -0.4
C11orf54-208ENST00000530279 POTEJP0CG39 1038 aa12.55□□□□□ -0.4
C11orf54-208ENST00000530279 C7P10643 843 aa12.55□□□□□ -0.4
C11orf54-208ENST00000530279 SLC39A7Q92504 469 aa12.55□□□□□ -0.4
C11orf54-208ENST00000530279 FAM163AQ96GL9 167 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 707.1 ms