RNA–Protein interactions for RNA: ENST00000528869.1

CD44-AS1-201, CD44 antisense RNA 1, humanhuman

TSL 4 BASIC

Gene CD44-AS1, Length 587 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-AS1-201ENST00000528869 AEBP2Q6ZN18 517 aaPredicted RBP32.13■■■□□ 2.73
CD44-AS1-201ENST00000528869 CHIC1Q5VXU3 224 aa30.95■■■□□ 2.55
CD44-AS1-201ENST00000528869 SENP3Q9H4L4 574 aaPredicted RBP27.31■■□□□ 1.96
CD44-AS1-201ENST00000528869 PHF23Q9BUL5 403 aaPredicted RBP27.18■■□□□ 1.94
CD44-AS1-201ENST00000528869 FOXD1Q16676 465 aa25.41■■□□□ 1.66
CD44-AS1-201ENST00000528869 PLPPR3Q6T4P5 718 aa24.93■■□□□ 1.58
CD44-AS1-201ENST00000528869 PPP6R1Q9UPN7 881 aa24.13■■□□□ 1.45
CD44-AS1-201ENST00000528869 ADRA2BP18089 450 aa24.07■■□□□ 1.44
CD44-AS1-201ENST00000528869 PIAS4Q8N2W9 510 aaPredicted RBP23.86■■□□□ 1.41
CD44-AS1-201ENST00000528869 MSH5O43196 834 aa23.59■■□□□ 1.37
CD44-AS1-201ENST00000528869 POTEDQ86YR6 584 aa23.49■■□□□ 1.35
CD44-AS1-201ENST00000528869 SCAF1Q9H7N4 1312 aaKnown RBP21.98■■□□□ 1.11
CD44-AS1-201ENST00000528869 MAPK8IP2Q13387 824 aaPredicted RBP21.96■■□□□ 1.11
CD44-AS1-201ENST00000528869 PPP4R3CPQ6ZMV5 832 aa21.92■■□□□ 1.1
CD44-AS1-201ENST00000528869 DMRT2Q9Y5R5 561 aa21.75■■□□□ 1.07
CD44-AS1-201ENST00000528869 CNKSR2Q8WXI2 1034 aa21.39■■□□□ 1.01
CD44-AS1-201ENST00000528869 NCBP3Q53F19 620 aaKnown RBP21.19■□□□□ 0.98
CD44-AS1-201ENST00000528869 HOXD11P31277 338 aaPredicted RBP21.12■□□□□ 0.97
CD44-AS1-201ENST00000528869 RNF216Q9NWF9 866 aaPredicted RBP21.08■□□□□ 0.97
CD44-AS1-201ENST00000528869 KCNA4P22459 653 aa20.95■□□□□ 0.94
CD44-AS1-201ENST00000528869 NPM3O75607 178 aaKnown RBP20.93■□□□□ 0.94
CD44-AS1-201ENST00000528869 DCAF8L1A6NGE4 600 aa20.81■□□□□ 0.92
CD44-AS1-201ENST00000528869 DNAJC5BQ9UF47 199 aa20.36■□□□□ 0.85
CD44-AS1-201ENST00000528869 RNF39Q9H2S5 420 aa20.18■□□□□ 0.82
CD44-AS1-201ENST00000528869 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.11■□□□□ 0.81
CD44-AS1-201ENST00000528869 CACNB1Q02641 598 aaPredicted RBP19.95■□□□□ 0.78
CD44-AS1-201ENST00000528869 C1QBPQ07021 282 aaKnown RBP19.9■□□□□ 0.78
CD44-AS1-201ENST00000528869 SLC4A2P04920 1241 aa19.87■□□□□ 0.77
CD44-AS1-201ENST00000528869 SLC4A1APQ9BWU0 796 aaKnown RBP19.85■□□□□ 0.77
CD44-AS1-201ENST00000528869 U3KPZ7 1027 aaPredicted RBP19.77■□□□□ 0.76
CD44-AS1-201ENST00000528869 FOXD4L1Q9NU39 408 aa19.39■□□□□ 0.69
CD44-AS1-201ENST00000528869 MYCNP04198 464 aaPredicted RBP19.34■□□□□ 0.69
CD44-AS1-201ENST00000528869 SPINK5Q9NQ38 1064 aaPredicted RBP19.34■□□□□ 0.69
CD44-AS1-201ENST00000528869 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.33■□□□□ 0.68
CD44-AS1-201ENST00000528869 HNRNPUL2Q1KMD3 747 aaKnown RBP19.33■□□□□ 0.68
CD44-AS1-201ENST00000528869 ZBTB22O15209 634 aa19.28■□□□□ 0.68
CD44-AS1-201ENST00000528869 CAPN15O75808 1086 aa19.26■□□□□ 0.67
CD44-AS1-201ENST00000528869 SAMD1Q6SPF0 538 aaPredicted RBP19.26■□□□□ 0.67
CD44-AS1-201ENST00000528869 APLP2Q06481 763 aa19.23■□□□□ 0.67
CD44-AS1-201ENST00000528869 TRHP20396 242 aaPredicted RBP19.08■□□□□ 0.64
CD44-AS1-201ENST00000528869 DSG3P32926 999 aa19.06■□□□□ 0.64
CD44-AS1-201ENST00000528869 ZNF219Q9P2Y4 722 aaPredicted RBP19.05■□□□□ 0.64
CD44-AS1-201ENST00000528869 ABCB7O75027 752 aa18.89■□□□□ 0.61
CD44-AS1-201ENST00000528869 ATF5Q9Y2D1 282 aaPredicted RBP18.87■□□□□ 0.61
CD44-AS1-201ENST00000528869 EHMT2Q96KQ7 1210 aa18.81■□□□□ 0.6
CD44-AS1-201ENST00000528869 CSRNP3Q8WYN3 585 aa18.8■□□□□ 0.6
CD44-AS1-201ENST00000528869 ATXN8OSP0DMR3 200 aa18.73■□□□□ 0.59
CD44-AS1-201ENST00000528869 POLA2Q14181 598 aa18.66■□□□□ 0.58
CD44-AS1-201ENST00000528869 ZBTB12Q9Y330 459 aaPredicted RBP18.33■□□□□ 0.52
CD44-AS1-201ENST00000528869 POTEHQ6S545 545 aa18.16■□□□□ 0.5
CD44-AS1-201ENST00000528869 RBM42Q9BTD8 480 aaKnown RBP18.16■□□□□ 0.5
CD44-AS1-201ENST00000528869 FBLN2P98095 1184 aa18.08■□□□□ 0.48
CD44-AS1-201ENST00000528869 OSCARQ8IYS5 282 aa18.08■□□□□ 0.48
CD44-AS1-201ENST00000528869 MKRN4PQ13434 485 aaPredicted RBP18.03■□□□□ 0.48
CD44-AS1-201ENST00000528869 AKT1S1Q96B36 256 aa17.84■□□□□ 0.45
CD44-AS1-201ENST00000528869 SPDYE2BA6NHP3 402 aa17.8■□□□□ 0.44
CD44-AS1-201ENST00000528869 SPDYE6P0CI01 402 aa17.8■□□□□ 0.44
CD44-AS1-201ENST00000528869 SPDYE2Q495Y8 402 aa17.8■□□□□ 0.44
CD44-AS1-201ENST00000528869 REM2Q8IYK8 340 aaPredicted RBP17.68■□□□□ 0.42
CD44-AS1-201ENST00000528869 ZNF692Q9BU19 519 aaPredicted RBP17.65■□□□□ 0.42
CD44-AS1-201ENST00000528869 SSUH2Q9Y2M2 353 aa17.63■□□□□ 0.41
CD44-AS1-201ENST00000528869 CHRDL2Q6WN34 429 aa17.58■□□□□ 0.4
CD44-AS1-201ENST00000528869 PITPNM1O00562 1244 aa17.5■□□□□ 0.39
CD44-AS1-201ENST00000528869 PABPN1Q86U42 306 aaKnown RBP eCLIP17.43■□□□□ 0.38
CD44-AS1-201ENST00000528869 SPDYE4A6NLX3 237 aa17.4■□□□□ 0.38
CD44-AS1-201ENST00000528869 SPDYE1Q8NFV5 336 aaPredicted RBP17.38■□□□□ 0.37
CD44-AS1-201ENST00000528869 CLEC11AQ9Y240 323 aa17.32■□□□□ 0.36
CD44-AS1-201ENST00000528869 PIP4P2Q8N4L2 257 aa17.28■□□□□ 0.36
CD44-AS1-201ENST00000528869 FXR2P51116 673 aaKnown RBP eCLIP17.24■□□□□ 0.35
CD44-AS1-201ENST00000528869 PRR29P0C7W0 189 aa17.09■□□□□ 0.33
CD44-AS1-201ENST00000528869 PROM2Q8N271 834 aa17.06■□□□□ 0.32
CD44-AS1-201ENST00000528869 PRKAR2AP13861 404 aaKnown RBP17.04■□□□□ 0.32
CD44-AS1-201ENST00000528869 FKBP8Q14318 412 aa17.02■□□□□ 0.32
CD44-AS1-201ENST00000528869 STAG3Q9UJ98 1225 aa17.01■□□□□ 0.31
CD44-AS1-201ENST00000528869 CHADLQ6NUI6 762 aa16.95■□□□□ 0.3
CD44-AS1-201ENST00000528869 HAX1O00165 279 aa16.81■□□□□ 0.28
CD44-AS1-201ENST00000528869 CREBZFQ9NS37 354 aa16.8■□□□□ 0.28
CD44-AS1-201ENST00000528869 FARP1Q9Y4F1 1045 aaPredicted RBP16.74■□□□□ 0.27
CD44-AS1-201ENST00000528869 C19orf67A6NJJ6 358 aa16.67■□□□□ 0.26
CD44-AS1-201ENST00000528869 EVX2Q03828 476 aa16.66■□□□□ 0.26
CD44-AS1-201ENST00000528869 SP7Q8TDD2 431 aaPredicted RBP16.65■□□□□ 0.26
CD44-AS1-201ENST00000528869 MNX1P50219 401 aaPredicted RBP16.58■□□□□ 0.24
CD44-AS1-201ENST00000528869 CD44P16070 742 aaKnown RBP16.53■□□□□ 0.24
CD44-AS1-201ENST00000528869 MIER1Q8N108 512 aa16.52■□□□□ 0.24
CD44-AS1-201ENST00000528869 FBXO3Q9UK99 471 aa16.5■□□□□ 0.23
CD44-AS1-201ENST00000528869 NPM1P06748 294 aaKnown RBP eCLIP16.48■□□□□ 0.23
CD44-AS1-201ENST00000528869 PLEKHG5O94827 1062 aa16.47■□□□□ 0.23
CD44-AS1-201ENST00000528869 PLCD3Q8N3E9 789 aa16.46■□□□□ 0.23
CD44-AS1-201ENST00000528869 ZRANB1Q9UGI0 708 aa16.37■□□□□ 0.21
CD44-AS1-201ENST00000528869 PAK3O75914 559 aaPredicted RBP16.32■□□□□ 0.2
CD44-AS1-201ENST00000528869 VASPP50552 380 aaPredicted RBP16.32■□□□□ 0.2
CD44-AS1-201ENST00000528869 GABBR2O75899 941 aa16.3■□□□□ 0.2
CD44-AS1-201ENST00000528869 ZNF579Q8NAF0 562 aaKnown RBP16.3■□□□□ 0.2
CD44-AS1-201ENST00000528869 ZBTB47Q9UFB7 747 aaPredicted RBP16.29■□□□□ 0.2
CD44-AS1-201ENST00000528869 TSPYL2Q9H2G4 693 aaPredicted RBP16.22■□□□□ 0.19
CD44-AS1-201ENST00000528869 RASEFQ8IZ41 740 aa16.21■□□□□ 0.19
CD44-AS1-201ENST00000528869 PHF12Q96QT6 1004 aa16.2■□□□□ 0.18
CD44-AS1-201ENST00000528869 CLCN6P51797 869 aa16.18■□□□□ 0.18
CD44-AS1-201ENST00000528869 NUBP1P53384 320 aa16.17■□□□□ 0.18
CD44-AS1-201ENST00000528869 CCDC61Q9Y6R9 512 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms