RNA–Protein interactions for RNA: ENST00000528642.5

ZCCHC11-220, Transcript of Terminal uridylyltransferase 4, humanhuman

TSL 5

Gene ZCCHC11, Length 3,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC11-220ENST00000528642 NISCHQ9Y2I1 1504 aa22.92■■□□□ 1.26
ZCCHC11-220ENST00000528642 SUPT5HO00267 1087 aaKnown RBP21.8■■□□□ 1.08
ZCCHC11-220ENST00000528642 SHROOM4Q9ULL8 1493 aa21.75■■□□□ 1.07
ZCCHC11-220ENST00000528642 DCAF8L2P0C7V8 631 aa21.39■■□□□ 1.02
ZCCHC11-220ENST00000528642 PCGF6Q9BYE7 350 aa21.25■□□□□ 0.99
ZCCHC11-220ENST00000528642 PPARGC1BQ86YN6 1023 aaKnown RBP21■□□□□ 0.95
ZCCHC11-220ENST00000528642 HRCP23327 699 aa20.89■□□□□ 0.93
ZCCHC11-220ENST00000528642 EHMT2Q96KQ7 1210 aa20.82■□□□□ 0.92
ZCCHC11-220ENST00000528642 LOC105371045A0A1W2PR82 267 aa20.54■□□□□ 0.88
ZCCHC11-220ENST00000528642 CHIC1Q5VXU3 224 aa20.53■□□□□ 0.88
ZCCHC11-220ENST00000528642 FAM9AQ8IZU1 332 aaPredicted RBP20.41■□□□□ 0.86
ZCCHC11-220ENST00000528642 TTBK1Q5TCY1 1321 aaPredicted RBP20.17■□□□□ 0.82
ZCCHC11-220ENST00000528642 MYO15BQ96JP2 1530 aa20.14■□□□□ 0.82
ZCCHC11-220ENST00000528642 TRIM26Q12899 539 aaPredicted RBP20.09■□□□□ 0.81
ZCCHC11-220ENST00000528642 PELP1Q8IZL8 1130 aaKnown RBP19.91■□□□□ 0.78
ZCCHC11-220ENST00000528642 CCDC180Q9P1Z9 1646 aa19.89■□□□□ 0.77
ZCCHC11-220ENST00000528642 TRIM41Q8WV44 630 aa19.88■□□□□ 0.77
ZCCHC11-220ENST00000528642 ZEB1P37275 1124 aaPredicted RBP19.83■□□□□ 0.76
ZCCHC11-220ENST00000528642 CCER1Q8TC90 406 aaPredicted RBP19.82■□□□□ 0.76
ZCCHC11-220ENST00000528642 SCAF1Q9H7N4 1312 aaKnown RBP19.77■□□□□ 0.75
ZCCHC11-220ENST00000528642 YTHDC1Q96MU7 727 aaKnown RBP19.77■□□□□ 0.75
ZCCHC11-220ENST00000528642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.73■□□□□ 0.75
ZCCHC11-220ENST00000528642 CENPBP07199 599 aaPredicted RBP19.57■□□□□ 0.72
ZCCHC11-220ENST00000528642 GTF3C3Q9Y5Q9 886 aa19.56■□□□□ 0.72
ZCCHC11-220ENST00000528642 NEUROD1Q13562 356 aa19.46■□□□□ 0.71
ZCCHC11-220ENST00000528642 DIEXFQ68CQ4 756 aaKnown RBP19.44■□□□□ 0.7
ZCCHC11-220ENST00000528642 DCAF1Q9Y4B6 1507 aa19.42■□□□□ 0.7
ZCCHC11-220ENST00000528642 ACIN1Q9UKV3 1341 aaKnown RBP19.39■□□□□ 0.69
ZCCHC11-220ENST00000528642 RANGAP1P46060 587 aaPredicted RBP19.39■□□□□ 0.69
ZCCHC11-220ENST00000528642 ZCCHC6Q5VYS8 1495 aaKnown RBP19.27■□□□□ 0.68
ZCCHC11-220ENST00000528642 UBTFP17480 764 aaKnown RBP19.19■□□□□ 0.66
ZCCHC11-220ENST00000528642 HNRNPUL2Q1KMD3 747 aaKnown RBP19.17■□□□□ 0.66
ZCCHC11-220ENST00000528642 MYT1Q01538 1121 aa19.04■□□□□ 0.64
ZCCHC11-220ENST00000528642 APLP2Q06481 763 aa18.99■□□□□ 0.63
ZCCHC11-220ENST00000528642 ZNF316A6NFI3 1004 aaPredicted RBP18.91■□□□□ 0.62
ZCCHC11-220ENST00000528642 MIER1Q8N108 512 aa18.86■□□□□ 0.61
ZCCHC11-220ENST00000528642 BCANQ96GW7 911 aa18.81■□□□□ 0.6
ZCCHC11-220ENST00000528642 ITGAEP38570 1179 aa18.78■□□□□ 0.6
ZCCHC11-220ENST00000528642 RSF1Q96T23 1441 aaPredicted RBP18.66■□□□□ 0.58
ZCCHC11-220ENST00000528642 SCRIBQ14160 1630 aa18.6■□□□□ 0.57
ZCCHC11-220ENST00000528642 ATP1B4Q9UN42 357 aaPredicted RBP18.51■□□□□ 0.55
ZCCHC11-220ENST00000528642 CSRNP3Q8WYN3 585 aa18.47■□□□□ 0.55
ZCCHC11-220ENST00000528642 RB1CC1Q8TDY2 1594 aa18.46■□□□□ 0.55
ZCCHC11-220ENST00000528642 NEFLP07196 543 aa18.45■□□□□ 0.54
ZCCHC11-220ENST00000528642 ERICH6Q7L0X2 663 aa18.42■□□□□ 0.54
ZCCHC11-220ENST00000528642 ABCC9O60706 1549 aa18.38■□□□□ 0.53
ZCCHC11-220ENST00000528642 FKBP8Q14318 412 aa18.35■□□□□ 0.53
ZCCHC11-220ENST00000528642 CEP162Q5TB80 1403 aa18.35■□□□□ 0.53
ZCCHC11-220ENST00000528642 SUPT16HQ9Y5B9 1047 aaKnown RBP18.34■□□□□ 0.53
ZCCHC11-220ENST00000528642 CECR2Q9BXF3 1484 aa18.33■□□□□ 0.52
ZCCHC11-220ENST00000528642 CNGB1Q14028 1251 aaPredicted RBP18.32■□□□□ 0.52
ZCCHC11-220ENST00000528642 HIRIP3Q9BW71 556 aaPredicted RBP18.32■□□□□ 0.52
ZCCHC11-220ENST00000528642 UNC13AQ9UPW8 1703 aa18.3■□□□□ 0.52
ZCCHC11-220ENST00000528642 PABPN1Q86U42 306 aaKnown RBP eCLIP18.28■□□□□ 0.52
ZCCHC11-220ENST00000528642 TRIM52Q96A61 297 aa18.26■□□□□ 0.51
ZCCHC11-220ENST00000528642 DDX10Q13206 875 aaKnown RBP18.25■□□□□ 0.51
ZCCHC11-220ENST00000528642 SOGA1O94964 1423 aa18.24■□□□□ 0.51
ZCCHC11-220ENST00000528642 KCNH8Q96L42 1107 aa18.21■□□□□ 0.51
ZCCHC11-220ENST00000528642 ANP32EQ9BTT0 268 aa18.18■□□□□ 0.5
ZCCHC11-220ENST00000528642 IRX6P78412 446 aaPredicted RBP18.16■□□□□ 0.5
ZCCHC11-220ENST00000528642 TSHZ2Q9NRE2 1034 aa18.16■□□□□ 0.5
ZCCHC11-220ENST00000528642 FAM50AQ14320 339 aaKnown RBP18.14■□□□□ 0.49
ZCCHC11-220ENST00000528642 CCDC88BA6NC98 1476 aa18.14■□□□□ 0.49
ZCCHC11-220ENST00000528642 ABCC8Q09428 1581 aa18.13■□□□□ 0.49
ZCCHC11-220ENST00000528642 BCL11AQ9H165 835 aa18.12■□□□□ 0.49
ZCCHC11-220ENST00000528642 MROH2BQ7Z745 1585 aa18.09■□□□□ 0.49
ZCCHC11-220ENST00000528642 NACADO15069 1562 aa18.08■□□□□ 0.48
ZCCHC11-220ENST00000528642 TNIKQ9UKE5 1360 aa18.05■□□□□ 0.48
ZCCHC11-220ENST00000528642 RUSC2Q8N2Y8 1516 aa18.03■□□□□ 0.48
ZCCHC11-220ENST00000528642 CLIP1P30622 1438 aa18.03■□□□□ 0.48
ZCCHC11-220ENST00000528642 P3H3Q8IVL6 736 aa18.01■□□□□ 0.47
ZCCHC11-220ENST00000528642 ANP32CO43423 234 aa17.99■□□□□ 0.47
ZCCHC11-220ENST00000528642 POLR3GLQ9BT43 218 aa17.99■□□□□ 0.47
ZCCHC11-220ENST00000528642 WIZO95785 1651 aa17.96■□□□□ 0.46
ZCCHC11-220ENST00000528642 SIN3AQ96ST3 1273 aa17.95■□□□□ 0.46
ZCCHC11-220ENST00000528642 SENP3-EIF4A1A0A087X0R7 540 aa17.94■□□□□ 0.46
ZCCHC11-220ENST00000528642 KANK4Q5T7N3 995 aaPredicted RBP17.92■□□□□ 0.46
ZCCHC11-220ENST00000528642 RBM19Q9Y4C8 960 aaKnown RBP17.92■□□□□ 0.46
ZCCHC11-220ENST00000528642 HNRNPUQ00839 825 aaKnown RBP eCLIP17.91■□□□□ 0.46
ZCCHC11-220ENST00000528642 CDK11AQ9UQ88 783 aaPredicted RBP17.91■□□□□ 0.46
ZCCHC11-220ENST00000528642 CLSPNQ9HAW4 1339 aa17.89■□□□□ 0.45
ZCCHC11-220ENST00000528642 GOLGA3Q08378 1498 aa17.89■□□□□ 0.45
ZCCHC11-220ENST00000528642 NBR1Q14596 966 aa17.86■□□□□ 0.45
ZCCHC11-220ENST00000528642 WRNQ14191 1432 aaPredicted RBP eCLIP17.83■□□□□ 0.44
ZCCHC11-220ENST00000528642 BICRAQ9NZM4 1560 aa17.78■□□□□ 0.44
ZCCHC11-220ENST00000528642 FAM9BQ8IZU0 186 aa17.77■□□□□ 0.44
ZCCHC11-220ENST00000528642 DHX57Q6P158 1386 aaKnown RBP17.73■□□□□ 0.43
ZCCHC11-220ENST00000528642 VPS8Q8N3P4 1428 aa17.69■□□□□ 0.42
ZCCHC11-220ENST00000528642 EEA1Q15075 1411 aa17.68■□□□□ 0.42
ZCCHC11-220ENST00000528642 ARID3CA6NKF2 412 aa17.68■□□□□ 0.42
ZCCHC11-220ENST00000528642 CEP164Q9UPV0 1460 aa17.67■□□□□ 0.42
ZCCHC11-220ENST00000528642 NPM2Q86SE8 214 aaKnown RBP17.66■□□□□ 0.42
ZCCHC11-220ENST00000528642 B4GALNT3Q6L9W6 998 aa17.65■□□□□ 0.42
ZCCHC11-220ENST00000528642 RTL5Q5HYW3 569 aaPredicted RBP17.64■□□□□ 0.41
ZCCHC11-220ENST00000528642 ZNF326Q5BKZ1 582 aaKnown RBP17.63■□□□□ 0.41
ZCCHC11-220ENST00000528642 RAPGEF2Q9Y4G8 1499 aa17.61■□□□□ 0.41
ZCCHC11-220ENST00000528642 TONSLQ96HA7 1378 aa17.61■□□□□ 0.41
ZCCHC11-220ENST00000528642 CHIC2Q9UKJ5 165 aa17.59■□□□□ 0.41
ZCCHC11-220ENST00000528642 SALL2Q9Y467 1007 aaPredicted RBP17.58■□□□□ 0.4
ZCCHC11-220ENST00000528642 BAZ1AQ9NRL2 1556 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms