RNA–Protein interactions for RNA: ENST00000528630.1

RCN1-204, Transcript of reticulocalbin 1, humanhuman

TSL 3

Gene RCN1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-204ENST00000528630 AEBP2Q6ZN18 517 aaPredicted RBP15.26■□□□□ 0.03
RCN1-204ENST00000528630 CHIC1Q5VXU3 224 aa14.04□□□□□ -0.16
RCN1-204ENST00000528630 SENP3Q9H4L4 574 aaPredicted RBP12.89□□□□□ -0.35
RCN1-204ENST00000528630 PHF23Q9BUL5 403 aaPredicted RBP12.76□□□□□ -0.37
RCN1-204ENST00000528630 FOXD1Q16676 465 aa12.21□□□□□ -0.45
RCN1-204ENST00000528630 POTEDQ86YR6 584 aa12.11□□□□□ -0.47
RCN1-204ENST00000528630 MSH5O43196 834 aa11.44□□□□□ -0.58
RCN1-204ENST00000528630 PIAS4Q8N2W9 510 aaPredicted RBP11.25□□□□□ -0.61
RCN1-204ENST00000528630 PPP6R1Q9UPN7 881 aa11.13□□□□□ -0.63
RCN1-204ENST00000528630 ADRA2BP18089 450 aa11.05□□□□□ -0.64
RCN1-204ENST00000528630 PLPPR3Q6T4P5 718 aa10.84□□□□□ -0.67
RCN1-204ENST00000528630 MAPK8IP2Q13387 824 aaPredicted RBP10.34□□□□□ -0.75
RCN1-204ENST00000528630 CACNB1Q02641 598 aaPredicted RBP10.19□□□□□ -0.78
RCN1-204ENST00000528630 DMRT2Q9Y5R5 561 aa10.19□□□□□ -0.78
RCN1-204ENST00000528630 DCAF8L1A6NGE4 600 aa9.88□□□□□ -0.83
RCN1-204ENST00000528630 SCAF1Q9H7N4 1312 aaKnown RBP9.86□□□□□ -0.83
RCN1-204ENST00000528630 RNF39Q9H2S5 420 aa9.8□□□□□ -0.84
RCN1-204ENST00000528630 HOXD11P31277 338 aaPredicted RBP9.62□□□□□ -0.87
RCN1-204ENST00000528630 C1QBPQ07021 282 aaKnown RBP9.54□□□□□ -0.88
RCN1-204ENST00000528630 PPP4R3CPQ6ZMV5 832 aa9.52□□□□□ -0.89
RCN1-204ENST00000528630 RNF216Q9NWF9 866 aaPredicted RBP9.4□□□□□ -0.9
RCN1-204ENST00000528630 CNKSR2Q8WXI2 1034 aa9.37□□□□□ -0.91
RCN1-204ENST00000528630 POTEHQ6S545 545 aa9.36□□□□□ -0.91
RCN1-204ENST00000528630 DNAJC5BQ9UF47 199 aa9.22□□□□□ -0.93
RCN1-204ENST00000528630 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.19□□□□□ -0.94
RCN1-204ENST00000528630 SPINK5Q9NQ38 1064 aaPredicted RBP9.07□□□□□ -0.96
RCN1-204ENST00000528630 DSG3P32926 999 aa9.05□□□□□ -0.96
RCN1-204ENST00000528630 CAPN15O75808 1086 aa9□□□□□ -0.97
RCN1-204ENST00000528630 U3KPZ7 1027 aaPredicted RBP9□□□□□ -0.97
RCN1-204ENST00000528630 NPM3O75607 178 aaKnown RBP8.9□□□□□ -0.98
RCN1-204ENST00000528630 NCBP3Q53F19 620 aaKnown RBP8.87□□□□□ -0.99
RCN1-204ENST00000528630 ABCB7O75027 752 aa8.83□□□□□ -1
RCN1-204ENST00000528630 TRHP20396 242 aaPredicted RBP8.77□□□□□ -1.01
RCN1-204ENST00000528630 SLC4A2P04920 1241 aa8.66□□□□□ -1.02
RCN1-204ENST00000528630 CHRDL2Q6WN34 429 aa8.61□□□□□ -1.03
RCN1-204ENST00000528630 ZNF219Q9P2Y4 722 aaPredicted RBP8.59□□□□□ -1.03
RCN1-204ENST00000528630 SP7Q8TDD2 431 aaPredicted RBP8.54□□□□□ -1.04
RCN1-204ENST00000528630 RBM42Q9BTD8 480 aaKnown RBP8.5□□□□□ -1.05
RCN1-204ENST00000528630 APLP2Q06481 763 aa8.45□□□□□ -1.06
RCN1-204ENST00000528630 POLA2Q14181 598 aa8.4□□□□□ -1.06
RCN1-204ENST00000528630 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.37□□□□□ -1.07
RCN1-204ENST00000528630 KCNA4P22459 653 aa8.37□□□□□ -1.07
RCN1-204ENST00000528630 HNRNPUL2Q1KMD3 747 aaKnown RBP8.37□□□□□ -1.07
RCN1-204ENST00000528630 SAMD1Q6SPF0 538 aaPredicted RBP8.36□□□□□ -1.07
RCN1-204ENST00000528630 PIP4P2Q8N4L2 257 aa8.36□□□□□ -1.07
RCN1-204ENST00000528630 EVX2Q03828 476 aa8.31□□□□□ -1.08
RCN1-204ENST00000528630 HAX1O00165 279 aa8.3□□□□□ -1.08
RCN1-204ENST00000528630 REM2Q8IYK8 340 aaPredicted RBP8.26□□□□□ -1.09
RCN1-204ENST00000528630 AKT1S1Q96B36 256 aa8.26□□□□□ -1.09
RCN1-204ENST00000528630 PITPNM1O00562 1244 aa8.21□□□□□ -1.1
RCN1-204ENST00000528630 ATF5Q9Y2D1 282 aaPredicted RBP8.2□□□□□ -1.1
RCN1-204ENST00000528630 OSCARQ8IYS5 282 aa8.19□□□□□ -1.1
RCN1-204ENST00000528630 FXR2P51116 673 aaKnown RBP eCLIP8.18□□□□□ -1.1
RCN1-204ENST00000528630 MYCNP04198 464 aaPredicted RBP8.14□□□□□ -1.11
RCN1-204ENST00000528630 LHX8Q68G74 356 aa8.02□□□□□ -1.13
RCN1-204ENST00000528630 ZBTB12Q9Y330 459 aaPredicted RBP8.01□□□□□ -1.13
RCN1-204ENST00000528630 GABBR2O75899 941 aa7.98□□□□□ -1.13
RCN1-204ENST00000528630 PRKAR2AP13861 404 aaKnown RBP7.98□□□□□ -1.13
RCN1-204ENST00000528630 PLSCR2Q9NRY7 297 aa7.96□□□□□ -1.14
RCN1-204ENST00000528630 C19orf67A6NJJ6 358 aa7.94□□□□□ -1.14
RCN1-204ENST00000528630 CLEC11AQ9Y240 323 aa7.91□□□□□ -1.14
RCN1-204ENST00000528630 POTEIP0CG38 1075 aa7.88□□□□□ -1.15
RCN1-204ENST00000528630 CHADLQ6NUI6 762 aa7.88□□□□□ -1.15
RCN1-204ENST00000528630 FOXD4L1Q9NU39 408 aa7.85□□□□□ -1.15
RCN1-204ENST00000528630 SPDYE2BA6NHP3 402 aa7.8□□□□□ -1.16
RCN1-204ENST00000528630 SPDYE6P0CI01 402 aa7.8□□□□□ -1.16
RCN1-204ENST00000528630 SPDYE2Q495Y8 402 aa7.8□□□□□ -1.16
RCN1-204ENST00000528630 SPDYE1Q8NFV5 336 aaPredicted RBP7.78□□□□□ -1.16
RCN1-204ENST00000528630 MKRN4PQ13434 485 aaPredicted RBP7.75□□□□□ -1.17
RCN1-204ENST00000528630 ZBTB22O15209 634 aa7.74□□□□□ -1.17
RCN1-204ENST00000528630 SLC4A1APQ9BWU0 796 aaKnown RBP7.74□□□□□ -1.17
RCN1-204ENST00000528630 ZNF692Q9BU19 519 aaPredicted RBP7.7□□□□□ -1.18
RCN1-204ENST00000528630 SSUH2Q9Y2M2 353 aa7.7□□□□□ -1.18
RCN1-204ENST00000528630 FBLN2P98095 1184 aa7.69□□□□□ -1.18
RCN1-204ENST00000528630 CD44P16070 742 aaKnown RBP7.68□□□□□ -1.18
RCN1-204ENST00000528630 PRR29P0C7W0 189 aa7.65□□□□□ -1.18
RCN1-204ENST00000528630 POTEB2H3BUK9 544 aa7.63□□□□□ -1.19
RCN1-204ENST00000528630 OTUD5Q96G74 571 aa7.63□□□□□ -1.19
RCN1-204ENST00000528630 PABPN1Q86U42 306 aaKnown RBP eCLIP7.61□□□□□ -1.191e-11■■■■■ 42.3
RCN1-204ENST00000528630 POTEMA6NI47 508 aa7.6□□□□□ -1.19
RCN1-204ENST00000528630 DCBLD2Q96PD2 775 aa7.6□□□□□ -1.19
RCN1-204ENST00000528630 FARP1Q9Y4F1 1045 aaPredicted RBP7.6□□□□□ -1.19
RCN1-204ENST00000528630 POTEGQ6S5H5 508 aa7.56□□□□□ -1.2
RCN1-204ENST00000528630 GALR2O43603 387 aaPredicted RBP7.55□□□□□ -1.2
RCN1-204ENST00000528630 ATXN8OSP0DMR3 200 aa7.55□□□□□ -1.2
RCN1-204ENST00000528630 ZRANB1Q9UGI0 708 aa7.52□□□□□ -1.21
RCN1-204ENST00000528630 ZNF579Q8NAF0 562 aaKnown RBP7.49□□□□□ -1.21
RCN1-204ENST00000528630 PELP1Q8IZL8 1130 aaKnown RBP7.48□□□□□ -1.21
RCN1-204ENST00000528630 POTEJP0CG39 1038 aa7.44□□□□□ -1.22
RCN1-204ENST00000528630 LCE2DQ5TA82 110 aaPredicted RBP7.44□□□□□ -1.22
RCN1-204ENST00000528630 PHF12Q96QT6 1004 aa7.44□□□□□ -1.22
RCN1-204ENST00000528630 CLCN6P51797 869 aa7.43□□□□□ -1.22
RCN1-204ENST00000528630 CREBZFQ9NS37 354 aa7.41□□□□□ -1.22
RCN1-204ENST00000528630 FAM163AQ96GL9 167 aaPredicted RBP7.35□□□□□ -1.23
RCN1-204ENST00000528630 METRNQ9UJH8 293 aa7.33□□□□□ -1.24
RCN1-204ENST00000528630 PCDH10Q9P2E7 1040 aa7.3□□□□□ -1.24
RCN1-204ENST00000528630 MS4A3Q96HJ5 214 aa7.29□□□□□ -1.24
RCN1-204ENST00000528630 ATMINO43313 823 aaPredicted RBP7.28□□□□□ -1.24
RCN1-204ENST00000528630 ASTLQ6HA08 431 aaPredicted RBP7.26□□□□□ -1.25
RCN1-204ENST00000528630 POTEFA5A3E0 1075 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms