RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-208ENST00000528475 NISCHQ9Y2I1 1504 aa48.68■■■■■ 5.38
GSDMD-208ENST00000528475 CCDC180Q9P1Z9 1646 aa41.55■■■■■ 4.24
GSDMD-208ENST00000528475 ZCCHC6Q5VYS8 1495 aaKnown RBP41.24■■■■■ 4.19
GSDMD-208ENST00000528475 SHROOM4Q9ULL8 1493 aa41.07■■■■■ 4.17
GSDMD-208ENST00000528475 SUPT5HO00267 1087 aaKnown RBP40.33■■■■■ 4.05
GSDMD-208ENST00000528475 DCAF1Q9Y4B6 1507 aa40.17■■■■■ 4.02
GSDMD-208ENST00000528475 DCAF8L2P0C7V8 631 aa39.79■■■■□ 3.96
GSDMD-208ENST00000528475 CHIC1Q5VXU3 224 aa39.47■■■■□ 3.91
GSDMD-208ENST00000528475 MYO15BQ96JP2 1530 aa39.3■■■■□ 3.88
GSDMD-208ENST00000528475 ABCC9O60706 1549 aa38.93■■■■□ 3.82
GSDMD-208ENST00000528475 SCRIBQ14160 1630 aa38.61■■■■□ 3.77
GSDMD-208ENST00000528475 NACADO15069 1562 aa38.52■■■■□ 3.76
GSDMD-208ENST00000528475 RSF1Q96T23 1441 aaPredicted RBP38.47■■■■□ 3.75
GSDMD-208ENST00000528475 HRCP23327 699 aa38.4■■■■□ 3.74
GSDMD-208ENST00000528475 RB1CC1Q8TDY2 1594 aa38.17■■■■□ 3.7
GSDMD-208ENST00000528475 PCGF6Q9BYE7 350 aa38.13■■■■□ 3.7
GSDMD-208ENST00000528475 LOC105371045A0A1W2PR82 267 aa38.1■■■■□ 3.69
GSDMD-208ENST00000528475 CECR2Q9BXF3 1484 aa37.8■■■■□ 3.64
GSDMD-208ENST00000528475 MROH2BQ7Z745 1585 aa37.74■■■■□ 3.63
GSDMD-208ENST00000528475 TRIM41Q8WV44 630 aa37.73■■■■□ 3.63
GSDMD-208ENST00000528475 TRIM26Q12899 539 aaPredicted RBP37.63■■■■□ 3.61
GSDMD-208ENST00000528475 WIZO95785 1651 aa37.53■■■■□ 3.6
GSDMD-208ENST00000528475 BAZ1AQ9NRL2 1556 aaPredicted RBP37.48■■■■□ 3.59
GSDMD-208ENST00000528475 UNC13AQ9UPW8 1703 aa37.32■■■■□ 3.56
GSDMD-208ENST00000528475 PPARGC1BQ86YN6 1023 aaKnown RBP37.29■■■■□ 3.56
GSDMD-208ENST00000528475 EIF4G1Q04637 1599 aaKnown RBP37.26■■■■□ 3.55
GSDMD-208ENST00000528475 FAM9AQ8IZU1 332 aaPredicted RBP37.18■■■■□ 3.54
GSDMD-208ENST00000528475 TOP2AP11388 1531 aaKnown RBP37.1■■■■□ 3.53
GSDMD-208ENST00000528475 SMARCA4P51532 1647 aa37.06■■■■□ 3.52
GSDMD-208ENST00000528475 BICRAQ9NZM4 1560 aa36.96■■■■□ 3.51
GSDMD-208ENST00000528475 ZEB1P37275 1124 aaPredicted RBP36.96■■■■□ 3.51
GSDMD-208ENST00000528475 PABPN1Q86U42 306 aaKnown RBP eCLIP36.87■■■■□ 3.495e-7■■■■■ 27.2
GSDMD-208ENST00000528475 SMARCA2P51531 1590 aa36.85■■■■□ 3.49
GSDMD-208ENST00000528475 CCDC88BA6NC98 1476 aa36.82■■■■□ 3.49
GSDMD-208ENST00000528475 EHMT2Q96KQ7 1210 aa36.66■■■■□ 3.46
GSDMD-208ENST00000528475 ABCC8Q09428 1581 aa36.63■■■■□ 3.46
GSDMD-208ENST00000528475 PEG3Q9GZU2 1588 aa36.5■■■■□ 3.43
GSDMD-208ENST00000528475 EEA1Q15075 1411 aa36.44■■■■□ 3.42
GSDMD-208ENST00000528475 WRNQ14191 1432 aaPredicted RBP eCLIP36.41■■■■□ 3.42
GSDMD-208ENST00000528475 SOGA1O94964 1423 aa36.31■■■■□ 3.4
GSDMD-208ENST00000528475 TNIKQ9UKE5 1360 aa36.29■■■■□ 3.4
GSDMD-208ENST00000528475 CEP162Q5TB80 1403 aa36.25■■■■□ 3.39
GSDMD-208ENST00000528475 CSRNP3Q8WYN3 585 aa36.16■■■■□ 3.38
GSDMD-208ENST00000528475 RUSC2Q8N2Y8 1516 aa36.1■■■■□ 3.37
GSDMD-208ENST00000528475 GOLGA3Q08378 1498 aa36.06■■■■□ 3.36
GSDMD-208ENST00000528475 ATAD2BQ9ULI0 1458 aa36.05■■■■□ 3.36
GSDMD-208ENST00000528475 SYNJ1O43426 1573 aa35.94■■■■□ 3.34
GSDMD-208ENST00000528475 BAZ1BQ9UIG0 1483 aaKnown RBP35.93■■■■□ 3.34
GSDMD-208ENST00000528475 KIF21BO75037 1637 aa35.91■■■■□ 3.34
GSDMD-208ENST00000528475 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.88■■■■□ 3.34
GSDMD-208ENST00000528475 CEP164Q9UPV0 1460 aa35.87■■■■□ 3.33
GSDMD-208ENST00000528475 UBTFP17480 764 aaKnown RBP35.87■■■■□ 3.33
GSDMD-208ENST00000528475 CCER1Q8TC90 406 aaPredicted RBP35.87■■■■□ 3.33
GSDMD-208ENST00000528475 TOP2BQ02880 1626 aa35.61■■■■□ 3.29
GSDMD-208ENST00000528475 NCAPD3P42695 1498 aa35.59■■■■□ 3.29
GSDMD-208ENST00000528475 CLIP1P30622 1438 aa35.57■■■■□ 3.28
GSDMD-208ENST00000528475 TTBK1Q5TCY1 1321 aaPredicted RBP35.56■■■■□ 3.28
GSDMD-208ENST00000528475 BIVM-ERCC5R4GMW8 1640 aa35.54■■■■□ 3.28
GSDMD-208ENST00000528475 HMGXB3Q12766 1538 aa35.52■■■■□ 3.28
GSDMD-208ENST00000528475 VPS8Q8N3P4 1428 aa35.49■■■■□ 3.27
GSDMD-208ENST00000528475 RAPGEF2Q9Y4G8 1499 aa35.46■■■■□ 3.27
GSDMD-208ENST00000528475 ERICH3Q5RHP9 1530 aa35.34■■■■□ 3.25
GSDMD-208ENST00000528475 SCAF1Q9H7N4 1312 aaKnown RBP35.28■■■■□ 3.24
GSDMD-208ENST00000528475 PRXQ9BXM0 1461 aa35.26■■■■□ 3.24
GSDMD-208ENST00000528475 DIEXFQ68CQ4 756 aaKnown RBP35.25■■■■□ 3.23
GSDMD-208ENST00000528475 CC2D2AQ9P2K1 1620 aa35.18■■■■□ 3.22
GSDMD-208ENST00000528475 CUX1P39880 1505 aa35.16■■■■□ 3.22
GSDMD-208ENST00000528475 APLP2Q06481 763 aa35.16■■■■□ 3.22
GSDMD-208ENST00000528475 CFTRP13569 1480 aa35.12■■■■□ 3.21
GSDMD-208ENST00000528475 ZNF316A6NFI3 1004 aaPredicted RBP35.06■■■■□ 3.2
GSDMD-208ENST00000528475 ACIN1Q9UKV3 1341 aaKnown RBP35.04■■■■□ 3.2
GSDMD-208ENST00000528475 HNRNPUL2Q1KMD3 747 aaKnown RBP35.04■■■■□ 3.2
GSDMD-208ENST00000528475 KIF27Q86VH2 1401 aa35.04■■■■□ 3.2
GSDMD-208ENST00000528475 ARAP1Q96P48 1450 aa35.03■■■■□ 3.2
GSDMD-208ENST00000528475 PRDM2Q13029 1718 aa34.98■■■■□ 3.19
GSDMD-208ENST00000528475 NEUROD1Q13562 356 aa34.88■■■■□ 3.17
GSDMD-208ENST00000528475 CENPBP07199 599 aaPredicted RBP34.88■■■■□ 3.17
GSDMD-208ENST00000528475 PELP1Q8IZL8 1130 aaKnown RBP34.88■■■■□ 3.17
GSDMD-208ENST00000528475 RANGAP1P46060 587 aaPredicted RBP34.86■■■■□ 3.17
GSDMD-208ENST00000528475 CLSPNQ9HAW4 1339 aa34.79■■■■□ 3.16
GSDMD-208ENST00000528475 CADPSQ9ULU8 1353 aa34.74■■■■□ 3.15
GSDMD-208ENST00000528475 RRBP1Q9P2E9 1410 aaKnown RBP34.73■■■■□ 3.15
GSDMD-208ENST00000528475 ARHGAP35Q9NRY4 1499 aa34.72■■■■□ 3.15
GSDMD-208ENST00000528475 KANK4Q5T7N3 995 aaPredicted RBP34.67■■■■□ 3.14
GSDMD-208ENST00000528475 DHX57Q6P158 1386 aaKnown RBP34.62■■■■□ 3.13
GSDMD-208ENST00000528475 IGF1RP08069 1367 aa34.61■■■■□ 3.13
GSDMD-208ENST00000528475 CUX2O14529 1486 aa34.6■■■■□ 3.13
GSDMD-208ENST00000528475 MAP3K1Q13233 1512 aa34.54■■■■□ 3.12
GSDMD-208ENST00000528475 GTF3C3Q9Y5Q9 886 aa34.52■■■■□ 3.12
GSDMD-208ENST00000528475 FGD5Q6ZNL6 1462 aa34.5■■■■□ 3.11
GSDMD-208ENST00000528475 CCNB3Q8WWL7 1395 aa34.48■■■■□ 3.11
GSDMD-208ENST00000528475 CARMIL1Q5VZK9 1371 aa34.45■■■■□ 3.11
GSDMD-208ENST00000528475 MIER1Q8N108 512 aa34.43■■■■□ 3.1
GSDMD-208ENST00000528475 TIAM1Q13009 1591 aa34.41■■■■□ 3.1
GSDMD-208ENST00000528475 FANCD2Q9BXW9 1451 aa34.35■■■■□ 3.09
GSDMD-208ENST00000528475 NESP48681 1621 aa34.32■■■■□ 3.08
GSDMD-208ENST00000528475 DNAJC5BQ9UF47 199 aa34.29■■■■□ 3.08
GSDMD-208ENST00000528475 DNMBPQ6XZF7 1577 aa34.26■■■■□ 3.08
GSDMD-208ENST00000528475 LAMC3Q9Y6N6 1575 aa34.26■■■■□ 3.08
GSDMD-208ENST00000528475 FHAD1B1AJZ9 1412 aa34.26■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms