RNA–Protein interactions for RNA: ENST00000528099.5

C11orf54-206, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C11orf54, Length 1,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-206ENST00000528099 AEBP2Q6ZN18 517 aaPredicted RBP24.12■■□□□ 1.45
C11orf54-206ENST00000528099 CHIC1Q5VXU3 224 aa23.19■■□□□ 1.3
C11orf54-206ENST00000528099 SENP3Q9H4L4 574 aaPredicted RBP20.59■□□□□ 0.89
C11orf54-206ENST00000528099 PHF23Q9BUL5 403 aaPredicted RBP20.37■□□□□ 0.85
C11orf54-206ENST00000528099 FOXD1Q16676 465 aa19.14■□□□□ 0.65
C11orf54-206ENST00000528099 PLPPR3Q6T4P5 718 aa18.7■□□□□ 0.58
C11orf54-206ENST00000528099 ADRA2BP18089 450 aa18.1■□□□□ 0.49
C11orf54-206ENST00000528099 PPP6R1Q9UPN7 881 aa18.1■□□□□ 0.49
C11orf54-206ENST00000528099 PIAS4Q8N2W9 510 aaPredicted RBP18.02■□□□□ 0.48
C11orf54-206ENST00000528099 MSH5O43196 834 aa17.84■□□□□ 0.45
C11orf54-206ENST00000528099 POTEDQ86YR6 584 aa16.93■□□□□ 0.3
C11orf54-206ENST00000528099 SCAF1Q9H7N4 1312 aaKnown RBP16.6■□□□□ 0.25
C11orf54-206ENST00000528099 MAPK8IP2Q13387 824 aaPredicted RBP16.54■□□□□ 0.24
C11orf54-206ENST00000528099 PPP4R3CPQ6ZMV5 832 aa16.43■□□□□ 0.22
C11orf54-206ENST00000528099 DMRT2Q9Y5R5 561 aa16.33■□□□□ 0.21
C11orf54-206ENST00000528099 CNKSR2Q8WXI2 1034 aa16.05■□□□□ 0.16
C11orf54-206ENST00000528099 NCBP3Q53F19 620 aaKnown RBP15.92■□□□□ 0.14
C11orf54-206ENST00000528099 DCAF8L1A6NGE4 600 aa15.84■□□□□ 0.13
C11orf54-206ENST00000528099 HOXD11P31277 338 aaPredicted RBP15.82■□□□□ 0.12
C11orf54-206ENST00000528099 RNF216Q9NWF9 866 aaPredicted RBP15.81■□□□□ 0.12
C11orf54-206ENST00000528099 NISCHQ9Y2I1 1504 aa15.78■□□□□ 0.12
C11orf54-206ENST00000528099 NPM3O75607 178 aaKnown RBP15.62■□□□□ 0.09
C11orf54-206ENST00000528099 KCNA4P22459 653 aa15.59■□□□□ 0.09
C11orf54-206ENST00000528099 ABCC9O60706 1549 aa15.45■□□□□ 0.06
C11orf54-206ENST00000528099 DNAJC5BQ9UF47 199 aa15.37■□□□□ 0.05
C11orf54-206ENST00000528099 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.21■□□□□ 0.03
C11orf54-206ENST00000528099 CACNB1Q02641 598 aaPredicted RBP15.2■□□□□ 0.02
C11orf54-206ENST00000528099 RNF39Q9H2S5 420 aa15.2■□□□□ 0.02
C11orf54-206ENST00000528099 C1QBPQ07021 282 aaKnown RBP15.03■□□□□ -0
C11orf54-206ENST00000528099 DNAJC5Q9H3Z4 198 aa14.83□□□□□ -0.04
C11orf54-206ENST00000528099 SLC4A2P04920 1241 aa14.82□□□□□ -0.04
C11orf54-206ENST00000528099 U3KPZ7 1027 aaPredicted RBP14.82□□□□□ -0.04
C11orf54-206ENST00000528099 SLC4A1APQ9BWU0 796 aaKnown RBP14.8□□□□□ -0.04
C11orf54-206ENST00000528099 CAPN15O75808 1086 aa14.6□□□□□ -0.07
C11orf54-206ENST00000528099 CCDC180Q9P1Z9 1646 aa14.6□□□□□ -0.07
C11orf54-206ENST00000528099 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.56□□□□□ -0.08
C11orf54-206ENST00000528099 HNRNPUL2Q1KMD3 747 aaKnown RBP14.56□□□□□ -0.08
C11orf54-206ENST00000528099 SPINK5Q9NQ38 1064 aaPredicted RBP14.56□□□□□ -0.08
C11orf54-206ENST00000528099 APLP2Q06481 763 aa14.51□□□□□ -0.09
C11orf54-206ENST00000528099 SAMD1Q6SPF0 538 aaPredicted RBP14.47□□□□□ -0.09
C11orf54-206ENST00000528099 MYCNP04198 464 aaPredicted RBP14.46□□□□□ -0.09
C11orf54-206ENST00000528099 FOXD4L1Q9NU39 408 aa14.46□□□□□ -0.1
C11orf54-206ENST00000528099 TRHP20396 242 aaPredicted RBP14.44□□□□□ -0.1
C11orf54-206ENST00000528099 ZNF219Q9P2Y4 722 aaPredicted RBP14.35□□□□□ -0.11
C11orf54-206ENST00000528099 DSG3P32926 999 aa14.35□□□□□ -0.11
C11orf54-206ENST00000528099 RB1CC1Q8TDY2 1594 aa14.33□□□□□ -0.11
C11orf54-206ENST00000528099 ZBTB22O15209 634 aa14.28□□□□□ -0.12
C11orf54-206ENST00000528099 ABCB7O75027 752 aa14.27□□□□□ -0.13
C11orf54-206ENST00000528099 PABPN1Q86U42 306 aaKnown RBP eCLIP14.21□□□□□ -0.13
C11orf54-206ENST00000528099 ATF5Q9Y2D1 282 aaPredicted RBP14.09□□□□□ -0.15
C11orf54-206ENST00000528099 POLA2Q14181 598 aa14.08□□□□□ -0.16
C11orf54-206ENST00000528099 CECR2Q9BXF3 1484 aa14.04□□□□□ -0.16
C11orf54-206ENST00000528099 NACADO15069 1562 aa14.02□□□□□ -0.16
C11orf54-206ENST00000528099 UNC13AQ9UPW8 1703 aa14.01□□□□□ -0.17
C11orf54-206ENST00000528099 EHMT2Q96KQ7 1210 aa13.98□□□□□ -0.17
C11orf54-206ENST00000528099 BICRAQ9NZM4 1560 aa13.97□□□□□ -0.17
C11orf54-206ENST00000528099 ATXN8OSP0DMR3 200 aa13.95□□□□□ -0.18
C11orf54-206ENST00000528099 CC2D2AQ9P2K1 1620 aa13.94□□□□□ -0.18
C11orf54-206ENST00000528099 CSRNP3Q8WYN3 585 aa13.9□□□□□ -0.18
C11orf54-206ENST00000528099 ZBTB12Q9Y330 459 aaPredicted RBP13.78□□□□□ -0.2
C11orf54-206ENST00000528099 CUX2O14529 1486 aa13.77□□□□□ -0.2
C11orf54-206ENST00000528099 RBM42Q9BTD8 480 aaKnown RBP13.72□□□□□ -0.21
C11orf54-206ENST00000528099 SHROOM4Q9ULL8 1493 aa13.71□□□□□ -0.21
C11orf54-206ENST00000528099 TRIM41Q8WV44 630 aa13.7□□□□□ -0.22
C11orf54-206ENST00000528099 EIF4G1Q04637 1599 aaKnown RBP13.68□□□□□ -0.22
C11orf54-206ENST00000528099 DCAF8L2P0C7V8 631 aa13.61□□□□□ -0.23
C11orf54-206ENST00000528099 FBLN2P98095 1184 aa13.61□□□□□ -0.23
C11orf54-206ENST00000528099 OSCARQ8IYS5 282 aa13.59□□□□□ -0.23
C11orf54-206ENST00000528099 MYO15BQ96JP2 1530 aa13.55□□□□□ -0.24
C11orf54-206ENST00000528099 AKT1S1Q96B36 256 aa13.44□□□□□ -0.26
C11orf54-206ENST00000528099 MKRN4PQ13434 485 aaPredicted RBP13.43□□□□□ -0.26
C11orf54-206ENST00000528099 ERCC6Q03468 1493 aa13.4□□□□□ -0.26
C11orf54-206ENST00000528099 SPDYE2BA6NHP3 402 aa13.36□□□□□ -0.27
C11orf54-206ENST00000528099 SPDYE6P0CI01 402 aa13.36□□□□□ -0.27
C11orf54-206ENST00000528099 SPDYE2Q495Y8 402 aa13.36□□□□□ -0.27
C11orf54-206ENST00000528099 POTEHQ6S545 545 aa13.36□□□□□ -0.27
C11orf54-206ENST00000528099 REM2Q8IYK8 340 aaPredicted RBP13.33□□□□□ -0.28
C11orf54-206ENST00000528099 CHRDL2Q6WN34 429 aa13.31□□□□□ -0.28
C11orf54-206ENST00000528099 ZNF692Q9BU19 519 aaPredicted RBP13.31□□□□□ -0.28
C11orf54-206ENST00000528099 SCRIBQ14160 1630 aa13.21□□□□□ -0.3
C11orf54-206ENST00000528099 PITPNM1O00562 1244 aa13.17□□□□□ -0.3
C11orf54-206ENST00000528099 SSUH2Q9Y2M2 353 aa13.16□□□□□ -0.3
C11orf54-206ENST00000528099 CLEC11AQ9Y240 323 aa13.14□□□□□ -0.31
C11orf54-206ENST00000528099 THOC2Q8NI27 1593 aaKnown RBP13.11□□□□□ -0.31
C11orf54-206ENST00000528099 SPDYE1Q8NFV5 336 aaPredicted RBP13.09□□□□□ -0.31
C11orf54-206ENST00000528099 PIP4P2Q8N4L2 257 aa13.04□□□□□ -0.32
C11orf54-206ENST00000528099 DCAF1Q9Y4B6 1507 aa13.02□□□□□ -0.33
C11orf54-206ENST00000528099 SPDYE4A6NLX3 237 aa13.02□□□□□ -0.33
C11orf54-206ENST00000528099 NESP48681 1621 aa13.01□□□□□ -0.33
C11orf54-206ENST00000528099 FXR2P51116 673 aaKnown RBP eCLIP12.97□□□□□ -0.33
C11orf54-206ENST00000528099 NCAPD3P42695 1498 aa12.96□□□□□ -0.33
C11orf54-206ENST00000528099 BAZ1AQ9NRL2 1556 aaPredicted RBP12.94□□□□□ -0.34
C11orf54-206ENST00000528099 PRR29P0C7W0 189 aa12.93□□□□□ -0.34
C11orf54-206ENST00000528099 RIMBP3CA6NJZ7 1639 aa12.89□□□□□ -0.35
C11orf54-206ENST00000528099 RIMBP3BA6NNM3 1639 aa12.89□□□□□ -0.35
C11orf54-206ENST00000528099 RIMBP3Q9UFD9 1639 aa12.89□□□□□ -0.35
C11orf54-206ENST00000528099 SMARCA2P51531 1590 aa12.88□□□□□ -0.35
C11orf54-206ENST00000528099 PRKAR2AP13861 404 aaKnown RBP12.88□□□□□ -0.35
C11orf54-206ENST00000528099 ZCCHC6Q5VYS8 1495 aaKnown RBP12.87□□□□□ -0.35
C11orf54-206ENST00000528099 KIF21AQ7Z4S6 1674 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms