RNA–Protein interactions for RNA: ENST00000527525.5

SIPA1-203, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 2 BASIC

Gene SIPA1, Length 3,235 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-203ENST00000527525 NISCHQ9Y2I1 1504 aa32.18■■■□□ 2.74
SIPA1-203ENST00000527525 DCAF8L2P0C7V8 631 aa28.07■■■□□ 2.08
SIPA1-203ENST00000527525 CCDC180Q9P1Z9 1646 aa27.53■■■□□ 2
SIPA1-203ENST00000527525 SHROOM4Q9ULL8 1493 aa27.44■■□□□ 1.98
SIPA1-203ENST00000527525 ABCC9O60706 1549 aa27.24■■□□□ 1.95
SIPA1-203ENST00000527525 ZCCHC6Q5VYS8 1495 aaKnown RBP26.91■■□□□ 1.9
SIPA1-203ENST00000527525 SUPT5HO00267 1087 aaKnown RBP26.44■■□□□ 1.82
SIPA1-203ENST00000527525 SCRIBQ14160 1630 aa26.18■■□□□ 1.78
SIPA1-203ENST00000527525 PABPN1Q86U42 306 aaKnown RBP eCLIP26.06■■□□□ 1.76
SIPA1-203ENST00000527525 DCAF1Q9Y4B6 1507 aa26.06■■□□□ 1.76
SIPA1-203ENST00000527525 NACADO15069 1562 aa25.9■■□□□ 1.74
SIPA1-203ENST00000527525 RB1CC1Q8TDY2 1594 aa25.84■■□□□ 1.73
SIPA1-203ENST00000527525 MYO15BQ96JP2 1530 aa25.64■■□□□ 1.7
SIPA1-203ENST00000527525 CECR2Q9BXF3 1484 aa25.43■■□□□ 1.66
SIPA1-203ENST00000527525 UNC13AQ9UPW8 1703 aa25.23■■□□□ 1.63
SIPA1-203ENST00000527525 RSF1Q96T23 1441 aaPredicted RBP25.18■■□□□ 1.62
SIPA1-203ENST00000527525 MROH2BQ7Z745 1585 aa25.11■■□□□ 1.61
SIPA1-203ENST00000527525 BICRAQ9NZM4 1560 aa25.09■■□□□ 1.61
SIPA1-203ENST00000527525 WIZO95785 1651 aa24.88■■□□□ 1.57
SIPA1-203ENST00000527525 BAZ1AQ9NRL2 1556 aaPredicted RBP24.78■■□□□ 1.56
SIPA1-203ENST00000527525 CHIC1Q5VXU3 224 aa24.76■■□□□ 1.55
SIPA1-203ENST00000527525 EHMT2Q96KQ7 1210 aa24.73■■□□□ 1.55
SIPA1-203ENST00000527525 SMARCA4P51532 1647 aa24.69■■□□□ 1.54
SIPA1-203ENST00000527525 FAM9AQ8IZU1 332 aaPredicted RBP24.61■■□□□ 1.53
SIPA1-203ENST00000527525 TRIM41Q8WV44 630 aa24.5■■□□□ 1.51
SIPA1-203ENST00000527525 EIF4G1Q04637 1599 aaKnown RBP24.46■■□□□ 1.51
SIPA1-203ENST00000527525 ATAD2BQ9ULI0 1458 aa24.46■■□□□ 1.51
SIPA1-203ENST00000527525 BAZ1BQ9UIG0 1483 aaKnown RBP24.43■■□□□ 1.5
SIPA1-203ENST00000527525 DNAJC5BQ9UF47 199 aa24.42■■□□□ 1.5
SIPA1-203ENST00000527525 CCDC88BA6NC98 1476 aa24.39■■□□□ 1.5
SIPA1-203ENST00000527525 PCGF6Q9BYE7 350 aa24.37■■□□□ 1.49
SIPA1-203ENST00000527525 TOP2AP11388 1531 aaKnown RBP24.31■■□□□ 1.48
SIPA1-203ENST00000527525 PPARGC1BQ86YN6 1023 aaKnown RBP24.31■■□□□ 1.48
SIPA1-203ENST00000527525 LOC105371045A0A1W2PR82 267 aa24.29■■□□□ 1.48
SIPA1-203ENST00000527525 HRCP23327 699 aa24.27■■□□□ 1.48
SIPA1-203ENST00000527525 SMARCA2P51531 1590 aa24.21■■□□□ 1.47
SIPA1-203ENST00000527525 CC2D2AQ9P2K1 1620 aa24.19■■□□□ 1.46
SIPA1-203ENST00000527525 ABCC8Q09428 1581 aa24.1■■□□□ 1.45
SIPA1-203ENST00000527525 NCAPD3P42695 1498 aa24.07■■□□□ 1.44
SIPA1-203ENST00000527525 PEG3Q9GZU2 1588 aa24.01■■□□□ 1.43
SIPA1-203ENST00000527525 RANGAP1P46060 587 aaPredicted RBP23.86■■□□□ 1.41
SIPA1-203ENST00000527525 NESP48681 1621 aa23.84■■□□□ 1.41
SIPA1-203ENST00000527525 HMGXB3Q12766 1538 aa23.83■■□□□ 1.41
SIPA1-203ENST00000527525 WRNQ14191 1432 aaPredicted RBP eCLIP23.77■■□□□ 1.4
SIPA1-203ENST00000527525 CADPSQ9ULU8 1353 aa23.72■■□□□ 1.39
SIPA1-203ENST00000527525 SOGA1O94964 1423 aa23.71■■□□□ 1.39
SIPA1-203ENST00000527525 RUSC2Q8N2Y8 1516 aa23.65■■□□□ 1.38
SIPA1-203ENST00000527525 UBTFP17480 764 aaKnown RBP23.64■■□□□ 1.37
SIPA1-203ENST00000527525 CFTRP13569 1480 aa23.6■■□□□ 1.37
SIPA1-203ENST00000527525 SYNJ1O43426 1573 aa23.56■■□□□ 1.36
SIPA1-203ENST00000527525 TTBK1Q5TCY1 1321 aaPredicted RBP23.55■■□□□ 1.36
SIPA1-203ENST00000527525 CSRNP3Q8WYN3 585 aa23.52■■□□□ 1.36
SIPA1-203ENST00000527525 FANCD2Q9BXW9 1451 aa23.5■■□□□ 1.35
SIPA1-203ENST00000527525 CUX1P39880 1505 aa23.4■■□□□ 1.34
SIPA1-203ENST00000527525 RAD54L2Q9Y4B4 1467 aa23.3■■□□□ 1.32
SIPA1-203ENST00000527525 PDS5BQ9NTI5 1447 aa23.3■■□□□ 1.32
SIPA1-203ENST00000527525 CEP164Q9UPV0 1460 aa23.3■■□□□ 1.32
SIPA1-203ENST00000527525 ERCC6Q03468 1493 aa23.29■■□□□ 1.32
SIPA1-203ENST00000527525 FGD5Q6ZNL6 1462 aa23.25■■□□□ 1.31
SIPA1-203ENST00000527525 CUX2O14529 1486 aa23.25■■□□□ 1.31
SIPA1-203ENST00000527525 TDRD9Q8NDG6 1382 aaKnown RBP23.25■■□□□ 1.31
SIPA1-203ENST00000527525 TOP2BQ02880 1626 aa23.21■■□□□ 1.31
SIPA1-203ENST00000527525 TRIM26Q12899 539 aaPredicted RBP23.2■■□□□ 1.3
SIPA1-203ENST00000527525 LAMC3Q9Y6N6 1575 aa23.16■■□□□ 1.3
SIPA1-203ENST00000527525 URB2Q14146 1524 aaKnown RBP23.15■■□□□ 1.3
SIPA1-203ENST00000527525 TOPBP1Q92547 1522 aa23.14■■□□□ 1.3
SIPA1-203ENST00000527525 P3H3Q8IVL6 736 aa23.13■■□□□ 1.29
SIPA1-203ENST00000527525 KIF27Q86VH2 1401 aa23.13■■□□□ 1.29
SIPA1-203ENST00000527525 FBLN2P98095 1184 aa23.11■■□□□ 1.29
SIPA1-203ENST00000527525 KIF21AQ7Z4S6 1674 aa23.11■■□□□ 1.29
SIPA1-203ENST00000527525 RAPGEF2Q9Y4G8 1499 aa23.1■■□□□ 1.29
SIPA1-203ENST00000527525 POLA1P09884 1462 aaPredicted RBP23.09■■□□□ 1.29
SIPA1-203ENST00000527525 ATP1B4Q9UN42 357 aaPredicted RBP23.05■■□□□ 1.28
SIPA1-203ENST00000527525 BIVM-ERCC5R4GMW8 1640 aa23.02■■□□□ 1.28
SIPA1-203ENST00000527525 EEA1Q15075 1411 aa23.02■■□□□ 1.28
SIPA1-203ENST00000527525 SCAF1Q9H7N4 1312 aaKnown RBP23.01■■□□□ 1.27
SIPA1-203ENST00000527525 GOLGA3Q08378 1498 aa22.99■■□□□ 1.27
SIPA1-203ENST00000527525 IGF1RP08069 1367 aa22.99■■□□□ 1.27
SIPA1-203ENST00000527525 CEP162Q5TB80 1403 aa22.99■■□□□ 1.27
SIPA1-203ENST00000527525 AQRO60306 1485 aaKnown RBP eCLIP22.99■■□□□ 1.272e-6■■■■■ 32.2
SIPA1-203ENST00000527525 DNMBPQ6XZF7 1577 aa22.98■■□□□ 1.27
SIPA1-203ENST00000527525 CARMIL1Q5VZK9 1371 aa22.96■■□□□ 1.27
SIPA1-203ENST00000527525 PRDM2Q13029 1718 aa22.94■■□□□ 1.26
SIPA1-203ENST00000527525 MRC2Q9UBG0 1479 aa22.92■■□□□ 1.26
SIPA1-203ENST00000527525 TNIKQ9UKE5 1360 aa22.9■■□□□ 1.26
SIPA1-203ENST00000527525 ZNF608Q9ULD9 1512 aaPredicted RBP22.87■■□□□ 1.25
SIPA1-203ENST00000527525 CLIP1P30622 1438 aa22.85■■□□□ 1.25
SIPA1-203ENST00000527525 ARID3CA6NKF2 412 aa22.84■■□□□ 1.25
SIPA1-203ENST00000527525 GAPVD1Q14C86 1478 aa22.81■■□□□ 1.24
SIPA1-203ENST00000527525 APLP2Q06481 763 aa22.81■■□□□ 1.24
SIPA1-203ENST00000527525 PRXQ9BXM0 1461 aa22.77■■□□□ 1.24
SIPA1-203ENST00000527525 PELP1Q8IZL8 1130 aaKnown RBP22.76■■□□□ 1.23
SIPA1-203ENST00000527525 ABCA10Q8WWZ4 1543 aa22.76■■□□□ 1.23
SIPA1-203ENST00000527525 ZEB1P37275 1124 aaPredicted RBP22.75■■□□□ 1.23
SIPA1-203ENST00000527525 CHMP7Q8WUX9 453 aaPredicted RBP22.75■■□□□ 1.23
SIPA1-203ENST00000527525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.69■■□□□ 1.22
SIPA1-203ENST00000527525 KIF21BO75037 1637 aa22.67■■□□□ 1.22
SIPA1-203ENST00000527525 WDR62O43379 1518 aa22.59■■□□□ 1.21
SIPA1-203ENST00000527525 IFT140Q96RY7 1462 aa22.59■■□□□ 1.21
SIPA1-203ENST00000527525 CCER1Q8TC90 406 aaPredicted RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms