RNA–Protein interactions for RNA: ENST00000526927.5

LTBP3-207, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-207ENST00000526927 NISCHQ9Y2I1 1504 aa38.08■■■■□ 3.69
LTBP3-207ENST00000526927 CCDC180Q9P1Z9 1646 aa32.67■■■□□ 2.82
LTBP3-207ENST00000526927 SHROOM4Q9ULL8 1493 aa32.15■■■□□ 2.74
LTBP3-207ENST00000526927 DCAF8L2P0C7V8 631 aa32.12■■■□□ 2.73
LTBP3-207ENST00000526927 ZCCHC6Q5VYS8 1495 aaKnown RBP32.02■■■□□ 2.72
LTBP3-207ENST00000526927 ABCC9O60706 1549 aa31.26■■■□□ 2.59
LTBP3-207ENST00000526927 SUPT5HO00267 1087 aaKnown RBP31.09■■■□□ 2.57
LTBP3-207ENST00000526927 DCAF1Q9Y4B6 1507 aa31.08■■■□□ 2.57
LTBP3-207ENST00000526927 SCRIBQ14160 1630 aa30.71■■■□□ 2.51
LTBP3-207ENST00000526927 MYO15BQ96JP2 1530 aa30.46■■■□□ 2.47
LTBP3-207ENST00000526927 NACADO15069 1562 aa30.41■■■□□ 2.46
LTBP3-207ENST00000526927 RB1CC1Q8TDY2 1594 aa30.15■■■□□ 2.42
LTBP3-207ENST00000526927 CECR2Q9BXF3 1484 aa29.89■■■□□ 2.38
LTBP3-207ENST00000526927 RSF1Q96T23 1441 aaPredicted RBP29.85■■■□□ 2.37
LTBP3-207ENST00000526927 UNC13AQ9UPW8 1703 aa29.79■■■□□ 2.36
LTBP3-207ENST00000526927 PABPN1Q86U42 306 aaKnown RBP eCLIP29.79■■■□□ 2.364e-8■■■□□ 15.8
LTBP3-207ENST00000526927 CHIC1Q5VXU3 224 aa29.69■■■□□ 2.34
LTBP3-207ENST00000526927 MROH2BQ7Z745 1585 aa29.66■■■□□ 2.34
LTBP3-207ENST00000526927 WIZO95785 1651 aa29.47■■■□□ 2.31
LTBP3-207ENST00000526927 BICRAQ9NZM4 1560 aa29.43■■■□□ 2.3
LTBP3-207ENST00000526927 BAZ1AQ9NRL2 1556 aaPredicted RBP29.28■■■□□ 2.28
LTBP3-207ENST00000526927 SMARCA4P51532 1647 aa29.19■■■□□ 2.26
LTBP3-207ENST00000526927 LOC105371045A0A1W2PR82 267 aa28.92■■■□□ 2.22
LTBP3-207ENST00000526927 TRIM41Q8WV44 630 aa28.9■■■□□ 2.22
LTBP3-207ENST00000526927 TOP2AP11388 1531 aaKnown RBP28.87■■■□□ 2.21
LTBP3-207ENST00000526927 FAM9AQ8IZU1 332 aaPredicted RBP28.82■■■□□ 2.2
LTBP3-207ENST00000526927 CCDC88BA6NC98 1476 aa28.81■■■□□ 2.2
LTBP3-207ENST00000526927 EHMT2Q96KQ7 1210 aa28.74■■■□□ 2.19
LTBP3-207ENST00000526927 SMARCA2P51531 1590 aa28.74■■■□□ 2.19
LTBP3-207ENST00000526927 ATAD2BQ9ULI0 1458 aa28.66■■■□□ 2.18
LTBP3-207ENST00000526927 EIF4G1Q04637 1599 aaKnown RBP28.57■■■□□ 2.16
LTBP3-207ENST00000526927 ABCC8Q09428 1581 aa28.56■■■□□ 2.16
LTBP3-207ENST00000526927 PEG3Q9GZU2 1588 aa28.55■■■□□ 2.16
LTBP3-207ENST00000526927 BAZ1BQ9UIG0 1483 aaKnown RBP28.54■■■□□ 2.16
LTBP3-207ENST00000526927 NCAPD3P42695 1498 aa28.17■■■□□ 2.1
LTBP3-207ENST00000526927 SOGA1O94964 1423 aa28.1■■■□□ 2.09
LTBP3-207ENST00000526927 HMGXB3Q12766 1538 aa28.07■■■□□ 2.08
LTBP3-207ENST00000526927 WRNQ14191 1432 aaPredicted RBP eCLIP28.06■■■□□ 2.08
LTBP3-207ENST00000526927 RUSC2Q8N2Y8 1516 aa28.05■■■□□ 2.08
LTBP3-207ENST00000526927 CC2D2AQ9P2K1 1620 aa28.05■■■□□ 2.08
LTBP3-207ENST00000526927 SYNJ1O43426 1573 aa28■■■□□ 2.07
LTBP3-207ENST00000526927 PCGF6Q9BYE7 350 aa27.99■■■□□ 2.07
LTBP3-207ENST00000526927 DNAJC5BQ9UF47 199 aa27.84■■■□□ 2.05
LTBP3-207ENST00000526927 PPARGC1BQ86YN6 1023 aaKnown RBP27.8■■■□□ 2.04
LTBP3-207ENST00000526927 CSRNP3Q8WYN3 585 aa27.79■■■□□ 2.04
LTBP3-207ENST00000526927 CFTRP13569 1480 aa27.74■■■□□ 2.03
LTBP3-207ENST00000526927 UBTFP17480 764 aaKnown RBP27.7■■■□□ 2.02
LTBP3-207ENST00000526927 CUX1P39880 1505 aa27.64■■■□□ 2.02
LTBP3-207ENST00000526927 CADPSQ9ULU8 1353 aa27.63■■■□□ 2.01
LTBP3-207ENST00000526927 TOP2BQ02880 1626 aa27.63■■■□□ 2.01
LTBP3-207ENST00000526927 HRCP23327 699 aa27.61■■■□□ 2.01
LTBP3-207ENST00000526927 NESP48681 1621 aa27.61■■■□□ 2.01
LTBP3-207ENST00000526927 RANGAP1P46060 587 aaPredicted RBP27.59■■■□□ 2.01
LTBP3-207ENST00000526927 TTBK1Q5TCY1 1321 aaPredicted RBP27.55■■■□□ 2
LTBP3-207ENST00000526927 EEA1Q15075 1411 aa27.55■■■□□ 2
LTBP3-207ENST00000526927 BIVM-ERCC5R4GMW8 1640 aa27.53■■■□□ 2
LTBP3-207ENST00000526927 CEP162Q5TB80 1403 aa27.49■■□□□ 1.99
LTBP3-207ENST00000526927 TRIM26Q12899 539 aaPredicted RBP27.48■■□□□ 1.99
LTBP3-207ENST00000526927 GOLGA3Q08378 1498 aa27.44■■□□□ 1.98
LTBP3-207ENST00000526927 PRDM2Q13029 1718 aa27.43■■□□□ 1.98
LTBP3-207ENST00000526927 TNIKQ9UKE5 1360 aa27.43■■□□□ 1.98
LTBP3-207ENST00000526927 RAPGEF2Q9Y4G8 1499 aa27.42■■□□□ 1.98
LTBP3-207ENST00000526927 FANCD2Q9BXW9 1451 aa27.4■■□□□ 1.98
LTBP3-207ENST00000526927 CEP164Q9UPV0 1460 aa27.36■■□□□ 1.97
LTBP3-207ENST00000526927 KIF21BO75037 1637 aa27.29■■□□□ 1.96
LTBP3-207ENST00000526927 FGD5Q6ZNL6 1462 aa27.28■■□□□ 1.96
LTBP3-207ENST00000526927 CUX2O14529 1486 aa27.25■■□□□ 1.95
LTBP3-207ENST00000526927 KIF27Q86VH2 1401 aa27.24■■□□□ 1.95
LTBP3-207ENST00000526927 RAD54L2Q9Y4B4 1467 aa27.19■■□□□ 1.94
LTBP3-207ENST00000526927 CLIP1P30622 1438 aa27.16■■□□□ 1.94
LTBP3-207ENST00000526927 PRXQ9BXM0 1461 aa27.14■■□□□ 1.93
LTBP3-207ENST00000526927 TOPBP1Q92547 1522 aa27.12■■□□□ 1.93
LTBP3-207ENST00000526927 LAMC3Q9Y6N6 1575 aa27.1■■□□□ 1.93
LTBP3-207ENST00000526927 URB2Q14146 1524 aaKnown RBP27.08■■□□□ 1.93
LTBP3-207ENST00000526927 IGF1RP08069 1367 aa27.07■■□□□ 1.92
LTBP3-207ENST00000526927 POLA1P09884 1462 aaPredicted RBP27.07■■□□□ 1.92
LTBP3-207ENST00000526927 DNMBPQ6XZF7 1577 aa27.06■■□□□ 1.92
LTBP3-207ENST00000526927 KIF21AQ7Z4S6 1674 aa27.05■■□□□ 1.92
LTBP3-207ENST00000526927 PDS5BQ9NTI5 1447 aa26.99■■□□□ 1.91
LTBP3-207ENST00000526927 ERICH3Q5RHP9 1530 aa26.97■■□□□ 1.91
LTBP3-207ENST00000526927 CARMIL1Q5VZK9 1371 aa26.94■■□□□ 1.9
LTBP3-207ENST00000526927 TDRD9Q8NDG6 1382 aaKnown RBP26.93■■□□□ 1.9
LTBP3-207ENST00000526927 VPS8Q8N3P4 1428 aa26.87■■□□□ 1.89
LTBP3-207ENST00000526927 ABCA10Q8WWZ4 1543 aa26.85■■□□□ 1.89
LTBP3-207ENST00000526927 ARAP1Q96P48 1450 aa26.83■■□□□ 1.89
LTBP3-207ENST00000526927 P3H3Q8IVL6 736 aa26.82■■□□□ 1.88
LTBP3-207ENST00000526927 APLP2Q06481 763 aa26.78■■□□□ 1.88
LTBP3-207ENST00000526927 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.77■■□□□ 1.88
LTBP3-207ENST00000526927 ARHGAP35Q9NRY4 1499 aa26.74■■□□□ 1.87
LTBP3-207ENST00000526927 WDR97A6NE52 1622 aa26.69■■□□□ 1.86
LTBP3-207ENST00000526927 KANK4Q5T7N3 995 aaPredicted RBP26.69■■□□□ 1.86
LTBP3-207ENST00000526927 GAPVD1Q14C86 1478 aa26.67■■□□□ 1.86
LTBP3-207ENST00000526927 AQRO60306 1485 aaKnown RBP eCLIP26.65■■□□□ 1.868e-8■■■■□ 23.4
LTBP3-207ENST00000526927 MRC2Q9UBG0 1479 aa26.65■■□□□ 1.86
LTBP3-207ENST00000526927 HNRNPUL2Q1KMD3 747 aaKnown RBP26.64■■□□□ 1.86
LTBP3-207ENST00000526927 TARBP1Q13395 1621 aaKnown RBP26.61■■□□□ 1.85
LTBP3-207ENST00000526927 ERCC6Q03468 1493 aa26.61■■□□□ 1.85
LTBP3-207ENST00000526927 ATP1B4Q9UN42 357 aaPredicted RBP26.61■■□□□ 1.85
LTBP3-207ENST00000526927 ABCA5Q8WWZ7 1642 aa26.6■■□□□ 1.85
LTBP3-207ENST00000526927 ZNF608Q9ULD9 1512 aaPredicted RBP26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms