RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 AEBP2Q6ZN18 517 aaPredicted RBP25.07■■□□□ 1.6
SF3B2-205ENST00000526653 CHIC1Q5VXU3 224 aa23.94■■□□□ 1.42
SF3B2-205ENST00000526653 SENP3Q9H4L4 574 aaPredicted RBP21.32■■□□□ 1
SF3B2-205ENST00000526653 PHF23Q9BUL5 403 aaPredicted RBP21.09■□□□□ 0.97
SF3B2-205ENST00000526653 FOXD1Q16676 465 aa19.87■□□□□ 0.77
SF3B2-205ENST00000526653 PLPPR3Q6T4P5 718 aa19.19■□□□□ 0.66
SF3B2-205ENST00000526653 PPP6R1Q9UPN7 881 aa18.73■□□□□ 0.59
SF3B2-205ENST00000526653 ADRA2BP18089 450 aa18.68■□□□□ 0.58
SF3B2-205ENST00000526653 PIAS4Q8N2W9 510 aaPredicted RBP18.61■□□□□ 0.57
SF3B2-205ENST00000526653 MSH5O43196 834 aa18.51■□□□□ 0.55
SF3B2-205ENST00000526653 POTEDQ86YR6 584 aa17.81■□□□□ 0.44
SF3B2-205ENST00000526653 MAPK8IP2Q13387 824 aaPredicted RBP17.11■□□□□ 0.33
SF3B2-205ENST00000526653 SCAF1Q9H7N4 1312 aaKnown RBP17.03■□□□□ 0.32
SF3B2-205ENST00000526653 DMRT2Q9Y5R5 561 aa16.94■□□□□ 0.3
SF3B2-205ENST00000526653 PPP4R3CPQ6ZMV5 832 aa16.86■□□□□ 0.29
SF3B2-205ENST00000526653 CNKSR2Q8WXI2 1034 aa16.49■□□□□ 0.23
SF3B2-205ENST00000526653 HOXD11P31277 338 aaPredicted RBP16.38■□□□□ 0.21
SF3B2-205ENST00000526653 RNF216Q9NWF9 866 aaPredicted RBP16.3■□□□□ 0.2
SF3B2-205ENST00000526653 DCAF8L1A6NGE4 600 aa16.25■□□□□ 0.19
SF3B2-205ENST00000526653 NCBP3Q53F19 620 aaKnown RBP16.24■□□□□ 0.19
SF3B2-205ENST00000526653 NPM3O75607 178 aaKnown RBP16.03■□□□□ 0.16
SF3B2-205ENST00000526653 KCNA4P22459 653 aa15.88■□□□□ 0.13
SF3B2-205ENST00000526653 RNF39Q9H2S5 420 aa15.83■□□□□ 0.12
SF3B2-205ENST00000526653 CACNB1Q02641 598 aaPredicted RBP15.8■□□□□ 0.12
SF3B2-205ENST00000526653 DNAJC5BQ9UF47 199 aa15.76■□□□□ 0.11
SF3B2-205ENST00000526653 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.61■□□□□ 0.094e-13■■□□□ 13.4
SF3B2-205ENST00000526653 C1QBPQ07021 282 aaKnown RBP15.59■□□□□ 0.09
SF3B2-205ENST00000526653 U3KPZ7 1027 aaPredicted RBP15.31■□□□□ 0.04
SF3B2-205ENST00000526653 SLC4A2P04920 1241 aa15.27■□□□□ 0.04
SF3B2-205ENST00000526653 SPINK5Q9NQ38 1064 aaPredicted RBP15.05■□□□□ -0
SF3B2-205ENST00000526653 SLC4A1APQ9BWU0 796 aaKnown RBP15.01□□□□□ -0.01
SF3B2-205ENST00000526653 CAPN15O75808 1086 aa15□□□□□ -0.01
SF3B2-205ENST00000526653 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.9□□□□□ -0.02
SF3B2-205ENST00000526653 HNRNPUL2Q1KMD3 747 aaKnown RBP14.9□□□□□ -0.02
SF3B2-205ENST00000526653 DSG3P32926 999 aa14.88□□□□□ -0.03
SF3B2-205ENST00000526653 APLP2Q06481 763 aa14.86□□□□□ -0.03
SF3B2-205ENST00000526653 SAMD1Q6SPF0 538 aaPredicted RBP14.83□□□□□ -0.04
SF3B2-205ENST00000526653 MYCNP04198 464 aaPredicted RBP14.81□□□□□ -0.04
SF3B2-205ENST00000526653 TRHP20396 242 aaPredicted RBP14.81□□□□□ -0.04
SF3B2-205ENST00000526653 ZNF219Q9P2Y4 722 aaPredicted RBP14.77□□□□□ -0.05
SF3B2-205ENST00000526653 FOXD4L1Q9NU39 408 aa14.75□□□□□ -0.05
SF3B2-205ENST00000526653 ABCB7O75027 752 aa14.69□□□□□ -0.06
SF3B2-205ENST00000526653 ZBTB22O15209 634 aa14.62□□□□□ -0.07
SF3B2-205ENST00000526653 ATF5Q9Y2D1 282 aaPredicted RBP14.49□□□□□ -0.09
SF3B2-205ENST00000526653 POLA2Q14181 598 aa14.44□□□□□ -0.1
SF3B2-205ENST00000526653 ATXN8OSP0DMR3 200 aa14.27□□□□□ -0.13
SF3B2-205ENST00000526653 RBM42Q9BTD8 480 aaKnown RBP14.17□□□□□ -0.14
SF3B2-205ENST00000526653 ZBTB12Q9Y330 459 aaPredicted RBP14.14□□□□□ -0.15
SF3B2-205ENST00000526653 CSRNP3Q8WYN3 585 aa14.08□□□□□ -0.16
SF3B2-205ENST00000526653 POTEHQ6S545 545 aa13.99□□□□□ -0.17
SF3B2-205ENST00000526653 OSCARQ8IYS5 282 aa13.99□□□□□ -0.17
SF3B2-205ENST00000526653 EHMT2Q96KQ7 1210 aa13.99□□□□□ -0.17
SF3B2-205ENST00000526653 AKT1S1Q96B36 256 aa13.89□□□□□ -0.19
SF3B2-205ENST00000526653 FBLN2P98095 1184 aa13.87□□□□□ -0.19
SF3B2-205ENST00000526653 MKRN4PQ13434 485 aaPredicted RBP13.82□□□□□ -0.2
SF3B2-205ENST00000526653 CHRDL2Q6WN34 429 aa13.81□□□□□ -0.2
SF3B2-205ENST00000526653 REM2Q8IYK8 340 aaPredicted RBP13.77□□□□□ -0.21
SF3B2-205ENST00000526653 SPDYE2BA6NHP3 402 aa13.73□□□□□ -0.21
SF3B2-205ENST00000526653 SPDYE6P0CI01 402 aa13.73□□□□□ -0.21
SF3B2-205ENST00000526653 SPDYE2Q495Y8 402 aa13.73□□□□□ -0.21
SF3B2-205ENST00000526653 PITPNM1O00562 1244 aa13.62□□□□□ -0.23
SF3B2-205ENST00000526653 ZNF692Q9BU19 519 aaPredicted RBP13.6□□□□□ -0.23
SF3B2-205ENST00000526653 SSUH2Q9Y2M2 353 aa13.58□□□□□ -0.24
SF3B2-205ENST00000526653 PIP4P2Q8N4L2 257 aa13.54□□□□□ -0.24
SF3B2-205ENST00000526653 NISCHQ9Y2I1 1504 aa13.54□□□□□ -0.24
SF3B2-205ENST00000526653 FXR2P51116 673 aaKnown RBP eCLIP13.47□□□□□ -0.254e-11■■□□□ 14.4
SF3B2-205ENST00000526653 SPDYE1Q8NFV5 336 aaPredicted RBP13.45□□□□□ -0.26
SF3B2-205ENST00000526653 CLEC11AQ9Y240 323 aa13.43□□□□□ -0.26
SF3B2-205ENST00000526653 PABPN1Q86U42 306 aaKnown RBP eCLIP13.41□□□□□ -0.26
SF3B2-205ENST00000526653 PRKAR2AP13861 404 aaKnown RBP13.27□□□□□ -0.29
SF3B2-205ENST00000526653 SPDYE4A6NLX3 237 aa13.24□□□□□ -0.29
SF3B2-205ENST00000526653 HAX1O00165 279 aa13.23□□□□□ -0.29
SF3B2-205ENST00000526653 PRR29P0C7W0 189 aa13.23□□□□□ -0.29
SF3B2-205ENST00000526653 SP7Q8TDD2 431 aaPredicted RBP13.19□□□□□ -0.3
SF3B2-205ENST00000526653 CHADLQ6NUI6 762 aa13.17□□□□□ -0.3
SF3B2-205ENST00000526653 EVX2Q03828 476 aa13.1□□□□□ -0.31
SF3B2-205ENST00000526653 STAG3Q9UJ98 1225 aa13.05□□□□□ -0.32
SF3B2-205ENST00000526653 C19orf67A6NJJ6 358 aa13.03□□□□□ -0.32
SF3B2-205ENST00000526653 FARP1Q9Y4F1 1045 aaPredicted RBP12.98□□□□□ -0.33
SF3B2-205ENST00000526653 CREBZFQ9NS37 354 aa12.95□□□□□ -0.34
SF3B2-205ENST00000526653 PROM2Q8N271 834 aa12.94□□□□□ -0.34
SF3B2-205ENST00000526653 ABCC9O60706 1549 aa12.92□□□□□ -0.34
SF3B2-205ENST00000526653 CD44P16070 742 aaKnown RBP12.86□□□□□ -0.35
SF3B2-205ENST00000526653 GABBR2O75899 941 aa12.8□□□□□ -0.36
SF3B2-205ENST00000526653 FKBP8Q14318 412 aa12.76□□□□□ -0.37
SF3B2-205ENST00000526653 MNX1P50219 401 aaPredicted RBP12.75□□□□□ -0.37
SF3B2-205ENST00000526653 ZRANB1Q9UGI0 708 aa12.7□□□□□ -0.38
SF3B2-205ENST00000526653 NPM1P06748 294 aaKnown RBP eCLIP12.69□□□□□ -0.38
SF3B2-205ENST00000526653 ZNF579Q8NAF0 562 aaKnown RBP12.67□□□□□ -0.38
SF3B2-205ENST00000526653 PAK3O75914 559 aaPredicted RBP12.62□□□□□ -0.39
SF3B2-205ENST00000526653 CLCN6P51797 869 aa12.62□□□□□ -0.39
SF3B2-205ENST00000526653 MIER1Q8N108 512 aa12.61□□□□□ -0.39
SF3B2-205ENST00000526653 PLEKHG5O94827 1062 aa12.56□□□□□ -0.4
SF3B2-205ENST00000526653 PHF12Q96QT6 1004 aa12.55□□□□□ -0.4
SF3B2-205ENST00000526653 POTEIP0CG38 1075 aa12.54□□□□□ -0.4
SF3B2-205ENST00000526653 PLCD3Q8N3E9 789 aa12.53□□□□□ -0.4
SF3B2-205ENST00000526653 GALR2O43603 387 aaPredicted RBP12.52□□□□□ -0.41
SF3B2-205ENST00000526653 TSPYL2Q9H2G4 693 aaPredicted RBP12.5□□□□□ -0.41
SF3B2-205ENST00000526653 DCBLD2Q96PD2 775 aa12.48□□□□□ -0.41
SF3B2-205ENST00000526653 RASEFQ8IZ41 740 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 171.8 ms