RNA–Protein interactions for RNA: ENST00000526265.5

CCDC90B-206, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,433 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-206ENST00000526265 AEBP2Q6ZN18 517 aaPredicted RBP33.27■■■□□ 2.92
CCDC90B-206ENST00000526265 CHIC1Q5VXU3 224 aa32.89■■■□□ 2.86
CCDC90B-206ENST00000526265 PHF23Q9BUL5 403 aaPredicted RBP28.92■■■□□ 2.22
CCDC90B-206ENST00000526265 SENP3Q9H4L4 574 aaPredicted RBP28.25■■■□□ 2.11
CCDC90B-206ENST00000526265 PLPPR3Q6T4P5 718 aa26.89■■□□□ 1.89
CCDC90B-206ENST00000526265 FOXD1Q16676 465 aa26.12■■□□□ 1.77
CCDC90B-206ENST00000526265 ADRA2BP18089 450 aa25.37■■□□□ 1.65
CCDC90B-206ENST00000526265 PPP6R1Q9UPN7 881 aa25.37■■□□□ 1.65
CCDC90B-206ENST00000526265 POTEDQ86YR6 584 aa25.32■■□□□ 1.64
CCDC90B-206ENST00000526265 PIAS4Q8N2W9 510 aaPredicted RBP24.72■■□□□ 1.55
CCDC90B-206ENST00000526265 MSH5O43196 834 aa24.01■■□□□ 1.43
CCDC90B-206ENST00000526265 PPP4R3CPQ6ZMV5 832 aa23.69■■□□□ 1.38
CCDC90B-206ENST00000526265 KCNA4P22459 653 aa23.52■■□□□ 1.36
CCDC90B-206ENST00000526265 SCAF1Q9H7N4 1312 aaKnown RBP23.31■■□□□ 1.32
CCDC90B-206ENST00000526265 NISCHQ9Y2I1 1504 aa23.27■■□□□ 1.32
CCDC90B-206ENST00000526265 NCBP3Q53F19 620 aaKnown RBP23.23■■□□□ 1.31
CCDC90B-206ENST00000526265 CNKSR2Q8WXI2 1034 aa22.99■■□□□ 1.27
CCDC90B-206ENST00000526265 MAPK8IP2Q13387 824 aaPredicted RBP22.9■■□□□ 1.26
CCDC90B-206ENST00000526265 NPM3O75607 178 aaKnown RBP22.84■■□□□ 1.25
CCDC90B-206ENST00000526265 DMRT2Q9Y5R5 561 aa22.59■■□□□ 1.21
CCDC90B-206ENST00000526265 SLC4A1APQ9BWU0 796 aaKnown RBP22.48■■□□□ 1.19
CCDC90B-206ENST00000526265 RNF216Q9NWF9 866 aaPredicted RBP22.46■■□□□ 1.19
CCDC90B-206ENST00000526265 HOXD11P31277 338 aaPredicted RBP22.27■■□□□ 1.16
CCDC90B-206ENST00000526265 DNAJC5BQ9UF47 199 aa22.23■■□□□ 1.15
CCDC90B-206ENST00000526265 EHMT2Q96KQ7 1210 aa22.21■■□□□ 1.15
CCDC90B-206ENST00000526265 CSRNP3Q8WYN3 585 aa21.82■■□□□ 1.08
CCDC90B-206ENST00000526265 ZBTB22O15209 634 aa21.63■■□□□ 1.05
CCDC90B-206ENST00000526265 FOXD4L1Q9NU39 408 aa21.6■■□□□ 1.05
CCDC90B-206ENST00000526265 DCAF8L1A6NGE4 600 aa21.53■■□□□ 1.04
CCDC90B-206ENST00000526265 SLC4A2P04920 1241 aa21.47■■□□□ 1.03
CCDC90B-206ENST00000526265 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.19■□□□□ 0.98
CCDC90B-206ENST00000526265 MYCNP04198 464 aaPredicted RBP21.13■□□□□ 0.97
CCDC90B-206ENST00000526265 CACNB1Q02641 598 aaPredicted RBP21.03■□□□□ 0.96
CCDC90B-206ENST00000526265 U3KPZ7 1027 aaPredicted RBP20.9■□□□□ 0.94
CCDC90B-206ENST00000526265 ATXN8OSP0DMR3 200 aa20.86■□□□□ 0.93
CCDC90B-206ENST00000526265 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.82■□□□□ 0.92
CCDC90B-206ENST00000526265 HNRNPUL2Q1KMD3 747 aaKnown RBP20.82■□□□□ 0.92
CCDC90B-206ENST00000526265 SAMD1Q6SPF0 538 aaPredicted RBP20.74■□□□□ 0.91
CCDC90B-206ENST00000526265 RNF39Q9H2S5 420 aa20.58■□□□□ 0.88
CCDC90B-206ENST00000526265 CCDC180Q9P1Z9 1646 aa20.56■□□□□ 0.88
CCDC90B-206ENST00000526265 APLP2Q06481 763 aa20.53■□□□□ 0.88
CCDC90B-206ENST00000526265 ATF5Q9Y2D1 282 aaPredicted RBP20.46■□□□□ 0.87
CCDC90B-206ENST00000526265 C1QBPQ07021 282 aaKnown RBP20.38■□□□□ 0.85
CCDC90B-206ENST00000526265 SPINK5Q9NQ38 1064 aaPredicted RBP20.17■□□□□ 0.82
CCDC90B-206ENST00000526265 ZNF219Q9P2Y4 722 aaPredicted RBP20.16■□□□□ 0.82
CCDC90B-206ENST00000526265 CAPN15O75808 1086 aa20.09■□□□□ 0.81
CCDC90B-206ENST00000526265 TRHP20396 242 aaPredicted RBP20.07■□□□□ 0.8
CCDC90B-206ENST00000526265 POLA2Q14181 598 aa19.84■□□□□ 0.77
CCDC90B-206ENST00000526265 ABCB7O75027 752 aa19.71■□□□□ 0.75
CCDC90B-206ENST00000526265 FKBP8Q14318 412 aa19.7■□□□□ 0.74
CCDC90B-206ENST00000526265 DSG3P32926 999 aa19.69■□□□□ 0.74
CCDC90B-206ENST00000526265 FBLN2P98095 1184 aa19.66■□□□□ 0.74
CCDC90B-206ENST00000526265 MKRN4PQ13434 485 aaPredicted RBP19.62■□□□□ 0.73
CCDC90B-206ENST00000526265 ZBTB12Q9Y330 459 aaPredicted RBP19.62■□□□□ 0.73
CCDC90B-206ENST00000526265 POTEHQ6S545 545 aa19.57■□□□□ 0.72
CCDC90B-206ENST00000526265 ABCC9O60706 1549 aa19.56■□□□□ 0.72
CCDC90B-206ENST00000526265 ZCCHC6Q5VYS8 1495 aaKnown RBP19.47■□□□□ 0.71
CCDC90B-206ENST00000526265 SPDYE4A6NLX3 237 aa19.37■□□□□ 0.69
CCDC90B-206ENST00000526265 DCAF1Q9Y4B6 1507 aa19.34■□□□□ 0.69
CCDC90B-206ENST00000526265 MYO15BQ96JP2 1530 aa19.27■□□□□ 0.68
CCDC90B-206ENST00000526265 DCAF8L2P0C7V8 631 aa19.22■□□□□ 0.67
CCDC90B-206ENST00000526265 NACADO15069 1562 aa19.21■□□□□ 0.67
CCDC90B-206ENST00000526265 OSCARQ8IYS5 282 aa19.16■□□□□ 0.66
CCDC90B-206ENST00000526265 PROM2Q8N271 834 aa19.15■□□□□ 0.66
CCDC90B-206ENST00000526265 RB1CC1Q8TDY2 1594 aa19.11■□□□□ 0.65
CCDC90B-206ENST00000526265 SPDYE2BA6NHP3 402 aa19.1■□□□□ 0.65
CCDC90B-206ENST00000526265 SPDYE6P0CI01 402 aa19.1■□□□□ 0.65
CCDC90B-206ENST00000526265 SPDYE2Q495Y8 402 aa19.1■□□□□ 0.65
CCDC90B-206ENST00000526265 ZNF692Q9BU19 519 aaPredicted RBP19.04■□□□□ 0.64
CCDC90B-206ENST00000526265 SSUH2Q9Y2M2 353 aa18.99■□□□□ 0.63
CCDC90B-206ENST00000526265 FBXO3Q9UK99 471 aa18.98■□□□□ 0.63
CCDC90B-206ENST00000526265 RBM42Q9BTD8 480 aaKnown RBP18.82■□□□□ 0.6
CCDC90B-206ENST00000526265 PABPN1Q86U42 306 aaKnown RBP eCLIP18.79■□□□□ 0.6
CCDC90B-206ENST00000526265 SCRIBQ14160 1630 aa18.69■□□□□ 0.58
CCDC90B-206ENST00000526265 VASPP50552 380 aaPredicted RBP18.66■□□□□ 0.58
CCDC90B-206ENST00000526265 UNC13AQ9UPW8 1703 aa18.64■□□□□ 0.57
CCDC90B-206ENST00000526265 AKT1S1Q96B36 256 aa18.64■□□□□ 0.57
CCDC90B-206ENST00000526265 AMER1Q5JTC6 1135 aaPredicted RBP18.63■□□□□ 0.57
CCDC90B-206ENST00000526265 STAG3Q9UJ98 1225 aa18.61■□□□□ 0.57
CCDC90B-206ENST00000526265 SHROOM4Q9ULL8 1493 aa18.55■□□□□ 0.56
CCDC90B-206ENST00000526265 RTN4Q9NQC3 1192 aaKnown RBP18.51■□□□□ 0.55
CCDC90B-206ENST00000526265 SPDYE1Q8NFV5 336 aaPredicted RBP18.45■□□□□ 0.54
CCDC90B-206ENST00000526265 BICRAQ9NZM4 1560 aa18.44■□□□□ 0.54
CCDC90B-206ENST00000526265 REM2Q8IYK8 340 aaPredicted RBP18.42■□□□□ 0.54
CCDC90B-206ENST00000526265 IFNLR1Q8IU57 520 aaPredicted RBP18.41■□□□□ 0.54
CCDC90B-206ENST00000526265 PLCD3Q8N3E9 789 aa18.34■□□□□ 0.53
CCDC90B-206ENST00000526265 MIER1Q8N108 512 aa18.31■□□□□ 0.52
CCDC90B-206ENST00000526265 CLEC11AQ9Y240 323 aa18.28■□□□□ 0.52
CCDC90B-206ENST00000526265 PLEKHG5O94827 1062 aa18.25■□□□□ 0.51
CCDC90B-206ENST00000526265 KLHL34Q8N239 644 aa18.24■□□□□ 0.51
CCDC90B-206ENST00000526265 PITPNM1O00562 1244 aa18.2■□□□□ 0.5
CCDC90B-206ENST00000526265 PRR29P0C7W0 189 aa18.2■□□□□ 0.5
CCDC90B-206ENST00000526265 SPOCK2Q92563 424 aa18.17■□□□□ 0.5
CCDC90B-206ENST00000526265 ZBTB47Q9UFB7 747 aaPredicted RBP18.17■□□□□ 0.5
CCDC90B-206ENST00000526265 BAZ1AQ9NRL2 1556 aaPredicted RBP18.04■□□□□ 0.48
CCDC90B-206ENST00000526265 CREBZFQ9NS37 354 aa18.04■□□□□ 0.48
CCDC90B-206ENST00000526265 CECR2Q9BXF3 1484 aa18.01■□□□□ 0.47
CCDC90B-206ENST00000526265 SMARCA4P51532 1647 aa17.96■□□□□ 0.47
CCDC90B-206ENST00000526265 EIF4G1Q04637 1599 aaKnown RBP17.95■□□□□ 0.46
CCDC90B-206ENST00000526265 PKD2Q13563 968 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms