RNA–Protein interactions for RNA: ENST00000526258.5

KDM2A-207, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best)

Gene KDM2A, Length 5,671 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-207ENST00000526258 PELP1Q8IZL8 1130 aaKnown RBP21.5■■□□□ 1.03
KDM2A-207ENST00000526258 MYT1Q01538 1121 aa21.41■■□□□ 1.02
KDM2A-207ENST00000526258 DCAF8L2P0C7V8 631 aa20.88■□□□□ 0.93
KDM2A-207ENST00000526258 CENPBP07199 599 aaPredicted RBP20.53■□□□□ 0.88
KDM2A-207ENST00000526258 ERICH6Q7L0X2 663 aa20.48■□□□□ 0.87
KDM2A-207ENST00000526258 SUPT5HO00267 1087 aaKnown RBP20.44■□□□□ 0.86
KDM2A-207ENST00000526258 PCGF6Q9BYE7 350 aa20.35■□□□□ 0.85
KDM2A-207ENST00000526258 CCER1Q8TC90 406 aaPredicted RBP20.22■□□□□ 0.83
KDM2A-207ENST00000526258 ZEB1P37275 1124 aaPredicted RBP20.13■□□□□ 0.81
KDM2A-207ENST00000526258 EHMT2Q96KQ7 1210 aa20.13■□□□□ 0.81
KDM2A-207ENST00000526258 TTBK1Q5TCY1 1321 aaPredicted RBP19.86■□□□□ 0.77
KDM2A-207ENST00000526258 HRCP23327 699 aa19.83■□□□□ 0.76
KDM2A-207ENST00000526258 YTHDC1Q96MU7 727 aaKnown RBP19.77■□□□□ 0.76
KDM2A-207ENST00000526258 APLP2Q06481 763 aa19.71■□□□□ 0.75
KDM2A-207ENST00000526258 NEFLP07196 543 aa19.7■□□□□ 0.74
KDM2A-207ENST00000526258 SHROOM4Q9ULL8 1493 aa19.61■□□□□ 0.73
KDM2A-207ENST00000526258 FAM9AQ8IZU1 332 aaPredicted RBP19.38■□□□□ 0.69
KDM2A-207ENST00000526258 PPARGC1BQ86YN6 1023 aaKnown RBP19.34■□□□□ 0.69
KDM2A-207ENST00000526258 DAXXQ9UER7 740 aaPredicted RBP19.25■□□□□ 0.67
KDM2A-207ENST00000526258 TRIM26Q12899 539 aaPredicted RBP19.25■□□□□ 0.67
KDM2A-207ENST00000526258 RTL5Q5HYW3 569 aaPredicted RBP19.2■□□□□ 0.66
KDM2A-207ENST00000526258 GTF3C3Q9Y5Q9 886 aa19.17■□□□□ 0.66
KDM2A-207ENST00000526258 DIEXFQ68CQ4 756 aaKnown RBP18.97■□□□□ 0.63
KDM2A-207ENST00000526258 RANGAP1P46060 587 aaPredicted RBP18.96■□□□□ 0.63
KDM2A-207ENST00000526258 ACIN1Q9UKV3 1341 aaKnown RBP18.88■□□□□ 0.61
KDM2A-207ENST00000526258 NISCHQ9Y2I1 1504 aa18.88■□□□□ 0.61
KDM2A-207ENST00000526258 TRIM41Q8WV44 630 aa18.81■□□□□ 0.6
KDM2A-207ENST00000526258 ZNF316A6NFI3 1004 aaPredicted RBP18.79■□□□□ 0.6
KDM2A-207ENST00000526258 EIF5BO60841 1220 aaKnown RBP18.77■□□□□ 0.6
KDM2A-207ENST00000526258 ATP1B4Q9UN42 357 aaPredicted RBP18.76■□□□□ 0.59
KDM2A-207ENST00000526258 BCANQ96GW7 911 aa18.7■□□□□ 0.58
KDM2A-207ENST00000526258 GLIPR1L2Q4G1C9 344 aa18.67■□□□□ 0.58
KDM2A-207ENST00000526258 UBTFP17480 764 aaKnown RBP18.63■□□□□ 0.57
KDM2A-207ENST00000526258 CDK11AQ9UQ88 783 aaPredicted RBP18.61■□□□□ 0.57
KDM2A-207ENST00000526258 CLSPNQ9HAW4 1339 aa18.57■□□□□ 0.56
KDM2A-207ENST00000526258 POLR3GLQ9BT43 218 aa18.56■□□□□ 0.56
KDM2A-207ENST00000526258 SCAF1Q9H7N4 1312 aaKnown RBP18.56■□□□□ 0.56
KDM2A-207ENST00000526258 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.55■□□□□ 0.56
KDM2A-207ENST00000526258 MYT1LQ9UL68 1186 aa18.55■□□□□ 0.56
KDM2A-207ENST00000526258 CNGB1Q14028 1251 aaPredicted RBP18.51■□□□□ 0.55
KDM2A-207ENST00000526258 LOC105371045A0A1W2PR82 267 aa18.49■□□□□ 0.55
KDM2A-207ENST00000526258 CHIC1Q5VXU3 224 aa18.38■□□□□ 0.53
KDM2A-207ENST00000526258 NEUROD1Q13562 356 aa18.36■□□□□ 0.53
KDM2A-207ENST00000526258 BCL11AQ9H165 835 aa18.35■□□□□ 0.53
KDM2A-207ENST00000526258 ITGAEP38570 1179 aa18.34■□□□□ 0.53
KDM2A-207ENST00000526258 ANP32AP39687 249 aaKnown RBP18.34■□□□□ 0.53
KDM2A-207ENST00000526258 HNRNPUL2Q1KMD3 747 aaKnown RBP18.34■□□□□ 0.53
KDM2A-207ENST00000526258 ANP32EQ9BTT0 268 aa18.31■□□□□ 0.52
KDM2A-207ENST00000526258 NBR1Q14596 966 aa18.16■□□□□ 0.5
KDM2A-207ENST00000526258 FKBP8Q14318 412 aa18.14■□□□□ 0.49
KDM2A-207ENST00000526258 ANP32CO43423 234 aa18.09■□□□□ 0.49
KDM2A-207ENST00000526258 NPM2Q86SE8 214 aaKnown RBP18.08■□□□□ 0.48
KDM2A-207ENST00000526258 SLC4A1APQ9BWU0 796 aaKnown RBP18.03■□□□□ 0.48
KDM2A-207ENST00000526258 ZBTB47Q9UFB7 747 aaPredicted RBP17.98■□□□□ 0.47
KDM2A-207ENST00000526258 ANP32BQ92688 251 aaKnown RBP17.96■□□□□ 0.47
KDM2A-207ENST00000526258 RTN4Q9NQC3 1192 aaKnown RBP17.83■□□□□ 0.45
KDM2A-207ENST00000526258 CANXP27824 592 aaKnown RBP17.8■□□□□ 0.44
KDM2A-207ENST00000526258 TNNT2P45379 298 aaPredicted RBP17.75■□□□□ 0.43
KDM2A-207ENST00000526258 ARXQ96QS3 562 aa17.75■□□□□ 0.43
KDM2A-207ENST00000526258 ERICH6BQ5W0A0 696 aa17.73■□□□□ 0.43
KDM2A-207ENST00000526258 HSP90AA1P07900 732 aaKnown RBP17.7■□□□□ 0.42
KDM2A-207ENST00000526258 NEFMP07197 916 aa17.69■□□□□ 0.42
KDM2A-207ENST00000526258 MIER1Q8N108 512 aa17.69■□□□□ 0.42
KDM2A-207ENST00000526258 DEKP35659 375 aaKnown RBP17.66■□□□□ 0.42
KDM2A-207ENST00000526258 HNRNPUQ00839 825 aaKnown RBP eCLIP17.65■□□□□ 0.42
KDM2A-207ENST00000526258 CCDC136Q96JN2 1154 aa17.65■□□□□ 0.42
KDM2A-207ENST00000526258 CSRNP3Q8WYN3 585 aa17.64■□□□□ 0.41
KDM2A-207ENST00000526258 FAM50AQ14320 339 aaKnown RBP17.64■□□□□ 0.41
KDM2A-207ENST00000526258 TRIM52Q96A61 297 aa17.63■□□□□ 0.41
KDM2A-207ENST00000526258 NAP1L5Q96NT1 182 aaPredicted RBP17.63■□□□□ 0.41
KDM2A-207ENST00000526258 DCAF1Q9Y4B6 1507 aa17.6■□□□□ 0.41
KDM2A-207ENST00000526258 ZNF326Q5BKZ1 582 aaKnown RBP17.6■□□□□ 0.41
KDM2A-207ENST00000526258 UPF2Q9HAU5 1272 aaKnown RBP17.59■□□□□ 0.41
KDM2A-207ENST00000526258 TRIM44Q96DX7 344 aaPredicted RBP17.58■□□□□ 0.4
KDM2A-207ENST00000526258 CDK11BP21127 795 aaKnown RBP17.54■□□□□ 0.4
KDM2A-207ENST00000526258 PPM1GO15355 546 aaPredicted RBP17.53■□□□□ 0.4
KDM2A-207ENST00000526258 IRX6P78412 446 aaPredicted RBP17.52■□□□□ 0.4
KDM2A-207ENST00000526258 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.52■□□□□ 0.4
KDM2A-207ENST00000526258 NOP58Q9Y2X3 529 aaKnown RBP17.51■□□□□ 0.39
KDM2A-207ENST00000526258 SUPT16HQ9Y5B9 1047 aaKnown RBP17.51■□□□□ 0.39
KDM2A-207ENST00000526258 DDRGK1Q96HY6 314 aa17.51■□□□□ 0.39
KDM2A-207ENST00000526258 DDX10Q13206 875 aaKnown RBP17.48■□□□□ 0.39
KDM2A-207ENST00000526258 SLC24A1O60721 1099 aa17.48■□□□□ 0.39
KDM2A-207ENST00000526258 FAM9BQ8IZU0 186 aa17.42■□□□□ 0.38
KDM2A-207ENST00000526258 NCLP19338 710 aaKnown RBP17.4■□□□□ 0.38
KDM2A-207ENST00000526258 RBM19Q9Y4C8 960 aaKnown RBP17.4■□□□□ 0.38
KDM2A-207ENST00000526258 LAS1LQ9Y4W2 734 aaKnown RBP17.4■□□□□ 0.38
KDM2A-207ENST00000526258 BECN1Q14457 450 aa17.33■□□□□ 0.37
KDM2A-207ENST00000526258 PRKCSHP14314 528 aaPredicted RBP17.33■□□□□ 0.36
KDM2A-207ENST00000526258 AMER1Q5JTC6 1135 aaPredicted RBP17.3■□□□□ 0.36
KDM2A-207ENST00000526258 TSHZ2Q9NRE2 1034 aa17.29■□□□□ 0.36
KDM2A-207ENST00000526258 SALL2Q9Y467 1007 aaPredicted RBP17.27■□□□□ 0.36
KDM2A-207ENST00000526258 DNTTIP2Q5QJE6 756 aaKnown RBP17.27■□□□□ 0.35
KDM2A-207ENST00000526258 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.25■□□□□ 0.35
KDM2A-207ENST00000526258 PPP4R2Q9NY27 417 aa17.23■□□□□ 0.35
KDM2A-207ENST00000526258 VSIG10Q8N0Z9 540 aa17.22■□□□□ 0.35
KDM2A-207ENST00000526258 PTMAP06454 111 aaKnown RBP17.21■□□□□ 0.35
KDM2A-207ENST00000526258 MRS2Q9HD23 443 aa17.21■□□□□ 0.35
KDM2A-207ENST00000526258 GOLGA6L22H0YM25 854 aa17.2■□□□□ 0.34
KDM2A-207ENST00000526258 ARID4BQ4LE39 1312 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms