RNA–Protein interactions for RNA: ENST00000525379.1

KDM2A-206, Transcript of lysine demethylase 2A, humanhuman

TSL 3

Gene KDM2A, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-206ENST00000525379 AEBP2Q6ZN18 517 aaPredicted RBP21.47■■□□□ 1.03
KDM2A-206ENST00000525379 CHIC1Q5VXU3 224 aa20.62■□□□□ 0.89
KDM2A-206ENST00000525379 SENP3Q9H4L4 574 aaPredicted RBP18.3■□□□□ 0.52
KDM2A-206ENST00000525379 PHF23Q9BUL5 403 aaPredicted RBP18.08■□□□□ 0.48
KDM2A-206ENST00000525379 FOXD1Q16676 465 aa17■□□□□ 0.31
KDM2A-206ENST00000525379 PLPPR3Q6T4P5 718 aa16.58■□□□□ 0.24
KDM2A-206ENST00000525379 PPP6R1Q9UPN7 881 aa16.06■□□□□ 0.16
KDM2A-206ENST00000525379 ADRA2BP18089 450 aa16.02■□□□□ 0.16
KDM2A-206ENST00000525379 PIAS4Q8N2W9 510 aaPredicted RBP15.95■□□□□ 0.14
KDM2A-206ENST00000525379 MSH5O43196 834 aa15.85■□□□□ 0.13
KDM2A-206ENST00000525379 POTEDQ86YR6 584 aa15.25■□□□□ 0.03
KDM2A-206ENST00000525379 SCAF1Q9H7N4 1312 aaKnown RBP14.68□□□□□ -0.06
KDM2A-206ENST00000525379 MAPK8IP2Q13387 824 aaPredicted RBP14.63□□□□□ -0.07
KDM2A-206ENST00000525379 DMRT2Q9Y5R5 561 aa14.55□□□□□ -0.08
KDM2A-206ENST00000525379 PPP4R3CPQ6ZMV5 832 aa14.53□□□□□ -0.08
KDM2A-206ENST00000525379 CNKSR2Q8WXI2 1034 aa14.23□□□□□ -0.13
KDM2A-206ENST00000525379 HOXD11P31277 338 aaPredicted RBP14.1□□□□□ -0.15
KDM2A-206ENST00000525379 NCBP3Q53F19 620 aaKnown RBP14.07□□□□□ -0.16
KDM2A-206ENST00000525379 RNF216Q9NWF9 866 aaPredicted RBP14.05□□□□□ -0.16
KDM2A-206ENST00000525379 DCAF8L1A6NGE4 600 aa13.87□□□□□ -0.19
KDM2A-206ENST00000525379 NPM3O75607 178 aaKnown RBP13.85□□□□□ -0.19
KDM2A-206ENST00000525379 KCNA4P22459 653 aa13.79□□□□□ -0.2
KDM2A-206ENST00000525379 DNAJC5BQ9UF47 199 aa13.62□□□□□ -0.23
KDM2A-206ENST00000525379 RNF39Q9H2S5 420 aa13.56□□□□□ -0.24
KDM2A-206ENST00000525379 CACNB1Q02641 598 aaPredicted RBP13.43□□□□□ -0.26
KDM2A-206ENST00000525379 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.4□□□□□ -0.26
KDM2A-206ENST00000525379 C1QBPQ07021 282 aaKnown RBP13.36□□□□□ -0.27
KDM2A-206ENST00000525379 SLC4A2P04920 1241 aa13.17□□□□□ -0.3
KDM2A-206ENST00000525379 U3KPZ7 1027 aaPredicted RBP13.17□□□□□ -0.3
KDM2A-206ENST00000525379 SLC4A1APQ9BWU0 796 aaKnown RBP13.06□□□□□ -0.32
KDM2A-206ENST00000525379 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.89□□□□□ -0.35
KDM2A-206ENST00000525379 HNRNPUL2Q1KMD3 747 aaKnown RBP12.89□□□□□ -0.35
KDM2A-206ENST00000525379 SPINK5Q9NQ38 1064 aaPredicted RBP12.89□□□□□ -0.35
KDM2A-206ENST00000525379 CAPN15O75808 1086 aa12.84□□□□□ -0.35
KDM2A-206ENST00000525379 APLP2Q06481 763 aa12.84□□□□□ -0.35
KDM2A-206ENST00000525379 MYCNP04198 464 aaPredicted RBP12.83□□□□□ -0.36
KDM2A-206ENST00000525379 SAMD1Q6SPF0 538 aaPredicted RBP12.83□□□□□ -0.36
KDM2A-206ENST00000525379 FOXD4L1Q9NU39 408 aa12.81□□□□□ -0.36
KDM2A-206ENST00000525379 DSG3P32926 999 aa12.75□□□□□ -0.37
KDM2A-206ENST00000525379 ZNF219Q9P2Y4 722 aaPredicted RBP12.72□□□□□ -0.37
KDM2A-206ENST00000525379 ZBTB22O15209 634 aa12.69□□□□□ -0.38
KDM2A-206ENST00000525379 TRHP20396 242 aaPredicted RBP12.69□□□□□ -0.38
KDM2A-206ENST00000525379 ABCB7O75027 752 aa12.56□□□□□ -0.4
KDM2A-206ENST00000525379 NISCHQ9Y2I1 1504 aa12.56□□□□□ -0.4
KDM2A-206ENST00000525379 ATF5Q9Y2D1 282 aaPredicted RBP12.48□□□□□ -0.41
KDM2A-206ENST00000525379 ATXN8OSP0DMR3 200 aa12.42□□□□□ -0.42
KDM2A-206ENST00000525379 POLA2Q14181 598 aa12.41□□□□□ -0.42
KDM2A-206ENST00000525379 CSRNP3Q8WYN3 585 aa12.29□□□□□ -0.44
KDM2A-206ENST00000525379 EHMT2Q96KQ7 1210 aa12.23□□□□□ -0.45
KDM2A-206ENST00000525379 ZBTB12Q9Y330 459 aaPredicted RBP12.23□□□□□ -0.45
KDM2A-206ENST00000525379 RBM42Q9BTD8 480 aaKnown RBP12.17□□□□□ -0.46
KDM2A-206ENST00000525379 OSCARQ8IYS5 282 aa12.02□□□□□ -0.49
KDM2A-206ENST00000525379 FBLN2P98095 1184 aa11.99□□□□□ -0.49
KDM2A-206ENST00000525379 MKRN4PQ13434 485 aaPredicted RBP11.94□□□□□ -0.5
KDM2A-206ENST00000525379 AKT1S1Q96B36 256 aa11.93□□□□□ -0.5
KDM2A-206ENST00000525379 SPDYE2BA6NHP3 402 aa11.85□□□□□ -0.51
KDM2A-206ENST00000525379 SPDYE6P0CI01 402 aa11.85□□□□□ -0.51
KDM2A-206ENST00000525379 SPDYE2Q495Y8 402 aa11.85□□□□□ -0.51
KDM2A-206ENST00000525379 POTEHQ6S545 545 aa11.85□□□□□ -0.51
KDM2A-206ENST00000525379 REM2Q8IYK8 340 aaPredicted RBP11.82□□□□□ -0.52
KDM2A-206ENST00000525379 CHRDL2Q6WN34 429 aa11.81□□□□□ -0.52
KDM2A-206ENST00000525379 SSUH2Q9Y2M2 353 aa11.74□□□□□ -0.53
KDM2A-206ENST00000525379 ZNF692Q9BU19 519 aaPredicted RBP11.72□□□□□ -0.53
KDM2A-206ENST00000525379 PITPNM1O00562 1244 aa11.68□□□□□ -0.54
KDM2A-206ENST00000525379 SPDYE1Q8NFV5 336 aaPredicted RBP11.59□□□□□ -0.55
KDM2A-206ENST00000525379 PIP4P2Q8N4L2 257 aa11.57□□□□□ -0.56
KDM2A-206ENST00000525379 PABPN1Q86U42 306 aaKnown RBP eCLIP11.56□□□□□ -0.56
KDM2A-206ENST00000525379 FXR2P51116 673 aaKnown RBP eCLIP11.54□□□□□ -0.56
KDM2A-206ENST00000525379 CLEC11AQ9Y240 323 aa11.5□□□□□ -0.57
KDM2A-206ENST00000525379 SPDYE4A6NLX3 237 aa11.49□□□□□ -0.57
KDM2A-206ENST00000525379 PRR29P0C7W0 189 aa11.37□□□□□ -0.59
KDM2A-206ENST00000525379 PRKAR2AP13861 404 aaKnown RBP11.37□□□□□ -0.59
KDM2A-206ENST00000525379 STAG3Q9UJ98 1225 aa11.3□□□□□ -0.6
KDM2A-206ENST00000525379 PROM2Q8N271 834 aa11.28□□□□□ -0.6
KDM2A-206ENST00000525379 HAX1O00165 279 aa11.27□□□□□ -0.61
KDM2A-206ENST00000525379 CHADLQ6NUI6 762 aa11.27□□□□□ -0.61
KDM2A-206ENST00000525379 SP7Q8TDD2 431 aaPredicted RBP11.23□□□□□ -0.61
KDM2A-206ENST00000525379 C19orf67A6NJJ6 358 aa11.17□□□□□ -0.62
KDM2A-206ENST00000525379 CREBZFQ9NS37 354 aa11.16□□□□□ -0.62
KDM2A-206ENST00000525379 FARP1Q9Y4F1 1045 aaPredicted RBP11.16□□□□□ -0.62
KDM2A-206ENST00000525379 EVX2Q03828 476 aa11.15□□□□□ -0.62
KDM2A-206ENST00000525379 FKBP8Q14318 412 aa11.12□□□□□ -0.63
KDM2A-206ENST00000525379 CD44P16070 742 aaKnown RBP11.03□□□□□ -0.64
KDM2A-206ENST00000525379 MNX1P50219 401 aaPredicted RBP11.02□□□□□ -0.65
KDM2A-206ENST00000525379 CCDC180Q9P1Z9 1646 aa10.98□□□□□ -0.65
KDM2A-206ENST00000525379 NPM1P06748 294 aaKnown RBP eCLIP10.96□□□□□ -0.65
KDM2A-206ENST00000525379 GABBR2O75899 941 aa10.93□□□□□ -0.66
KDM2A-206ENST00000525379 MIER1Q8N108 512 aa10.91□□□□□ -0.66
KDM2A-206ENST00000525379 ZNF579Q8NAF0 562 aaKnown RBP10.9□□□□□ -0.66
KDM2A-206ENST00000525379 ZRANB1Q9UGI0 708 aa10.9□□□□□ -0.66
KDM2A-206ENST00000525379 PLEKHG5O94827 1062 aa10.89□□□□□ -0.67
KDM2A-206ENST00000525379 PAK3O75914 559 aaPredicted RBP10.88□□□□□ -0.67
KDM2A-206ENST00000525379 CLCN6P51797 869 aa10.88□□□□□ -0.67
KDM2A-206ENST00000525379 FBXO3Q9UK99 471 aa10.86□□□□□ -0.67
KDM2A-206ENST00000525379 PLCD3Q8N3E9 789 aa10.85□□□□□ -0.67
KDM2A-206ENST00000525379 ZBTB47Q9UFB7 747 aaPredicted RBP10.79□□□□□ -0.68
KDM2A-206ENST00000525379 PHF12Q96QT6 1004 aa10.77□□□□□ -0.69
KDM2A-206ENST00000525379 RASEFQ8IZ41 740 aa10.74□□□□□ -0.69
KDM2A-206ENST00000525379 TSPYL2Q9H2G4 693 aaPredicted RBP10.74□□□□□ -0.69
KDM2A-206ENST00000525379 GALR2O43603 387 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms