RNA–Protein interactions for RNA: ENST00000525107.6

LMO7-215, Transcript of LIM domain 7, humanhuman

TSL 5

Gene LMO7, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-215ENST00000525107 AEBP2Q6ZN18 517 aaPredicted RBP28.21■■■□□ 2.11
LMO7-215ENST00000525107 CHIC1Q5VXU3 224 aa26.28■■□□□ 1.8
LMO7-215ENST00000525107 SENP3Q9H4L4 574 aaPredicted RBP24.11■■□□□ 1.45
LMO7-215ENST00000525107 PHF23Q9BUL5 403 aaPredicted RBP23.73■■□□□ 1.39
LMO7-215ENST00000525107 FOXD1Q16676 465 aa22.61■■□□□ 1.21
LMO7-215ENST00000525107 POTEDQ86YR6 584 aa22.12■■□□□ 1.13
LMO7-215ENST00000525107 MSH5O43196 834 aa21.37■■□□□ 1.01
LMO7-215ENST00000525107 PIAS4Q8N2W9 510 aaPredicted RBP20.92■□□□□ 0.94
LMO7-215ENST00000525107 PPP6R1Q9UPN7 881 aa20.62■□□□□ 0.89
LMO7-215ENST00000525107 ADRA2BP18089 450 aa20.5■□□□□ 0.87
LMO7-215ENST00000525107 PLPPR3Q6T4P5 718 aa20.47■□□□□ 0.87
LMO7-215ENST00000525107 MAPK8IP2Q13387 824 aaPredicted RBP19.06■□□□□ 0.64
LMO7-215ENST00000525107 DMRT2Q9Y5R5 561 aa19.03■□□□□ 0.64
LMO7-215ENST00000525107 CACNB1Q02641 598 aaPredicted RBP18.79■□□□□ 0.6
LMO7-215ENST00000525107 SCAF1Q9H7N4 1312 aaKnown RBP18.68■□□□□ 0.58
LMO7-215ENST00000525107 DCAF8L1A6NGE4 600 aa18.27■□□□□ 0.52
LMO7-215ENST00000525107 RNF39Q9H2S5 420 aa18.21■□□□□ 0.51
LMO7-215ENST00000525107 HOXD11P31277 338 aaPredicted RBP18.05■□□□□ 0.48
LMO7-215ENST00000525107 C1QBPQ07021 282 aaKnown RBP17.88■□□□□ 0.45
LMO7-215ENST00000525107 PPP4R3CPQ6ZMV5 832 aa17.88■□□□□ 0.45
LMO7-215ENST00000525107 RNF216Q9NWF9 866 aaPredicted RBP17.71■□□□□ 0.43
LMO7-215ENST00000525107 CNKSR2Q8WXI2 1034 aa17.68■□□□□ 0.42
LMO7-215ENST00000525107 DNAJC5BQ9UF47 199 aa17.54■□□□□ 0.4
LMO7-215ENST00000525107 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.19■□□□□ 0.346e-7■■□□□ 14.5
LMO7-215ENST00000525107 POTEHQ6S545 545 aa17.18■□□□□ 0.34
LMO7-215ENST00000525107 NCBP3Q53F19 620 aaKnown RBP16.93■□□□□ 0.3
LMO7-215ENST00000525107 DSG3P32926 999 aa16.81■□□□□ 0.28
LMO7-215ENST00000525107 U3KPZ7 1027 aaPredicted RBP16.77■□□□□ 0.28
LMO7-215ENST00000525107 SPINK5Q9NQ38 1064 aaPredicted RBP16.76■□□□□ 0.27
LMO7-215ENST00000525107 NPM3O75607 178 aaKnown RBP16.74■□□□□ 0.27
LMO7-215ENST00000525107 CAPN15O75808 1086 aa16.72■□□□□ 0.27
LMO7-215ENST00000525107 ABCB7O75027 752 aa16.3■□□□□ 0.2
LMO7-215ENST00000525107 TRHP20396 242 aaPredicted RBP16.29■□□□□ 0.2
LMO7-215ENST00000525107 SLC4A2P04920 1241 aa16.2■□□□□ 0.18
LMO7-215ENST00000525107 ZNF219Q9P2Y4 722 aaPredicted RBP16.2■□□□□ 0.18
LMO7-215ENST00000525107 APLP2Q06481 763 aa16.13■□□□□ 0.17
LMO7-215ENST00000525107 RBM42Q9BTD8 480 aaKnown RBP16■□□□□ 0.15
LMO7-215ENST00000525107 CHRDL2Q6WN34 429 aa15.98■□□□□ 0.15
LMO7-215ENST00000525107 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.97■□□□□ 0.15
LMO7-215ENST00000525107 HNRNPUL2Q1KMD3 747 aaKnown RBP15.97■□□□□ 0.15
LMO7-215ENST00000525107 SAMD1Q6SPF0 538 aaPredicted RBP15.87■□□□□ 0.13
LMO7-215ENST00000525107 KCNA4P22459 653 aa15.8■□□□□ 0.12
LMO7-215ENST00000525107 SP7Q8TDD2 431 aaPredicted RBP15.76■□□□□ 0.11
LMO7-215ENST00000525107 POLA2Q14181 598 aa15.7■□□□□ 0.1
LMO7-215ENST00000525107 AKT1S1Q96B36 256 aa15.51■□□□□ 0.07
LMO7-215ENST00000525107 MYCNP04198 464 aaPredicted RBP15.46■□□□□ 0.07
LMO7-215ENST00000525107 PIP4P2Q8N4L2 257 aa15.46■□□□□ 0.07
LMO7-215ENST00000525107 REM2Q8IYK8 340 aaPredicted RBP15.4■□□□□ 0.06
LMO7-215ENST00000525107 HAX1O00165 279 aa15.36■□□□□ 0.05
LMO7-215ENST00000525107 ZBTB12Q9Y330 459 aaPredicted RBP15.27■□□□□ 0.04
LMO7-215ENST00000525107 FXR2P51116 673 aaKnown RBP eCLIP15.25■□□□□ 0.03
LMO7-215ENST00000525107 PITPNM1O00562 1244 aa15.24■□□□□ 0.03
LMO7-215ENST00000525107 ATF5Q9Y2D1 282 aaPredicted RBP15.24■□□□□ 0.03
LMO7-215ENST00000525107 OSCARQ8IYS5 282 aa15.23■□□□□ 0.03
LMO7-215ENST00000525107 EVX2Q03828 476 aa15.17■□□□□ 0.02
LMO7-215ENST00000525107 FOXD4L1Q9NU39 408 aa14.93□□□□□ -0.02
LMO7-215ENST00000525107 PRKAR2AP13861 404 aaKnown RBP14.83□□□□□ -0.04
LMO7-215ENST00000525107 C19orf67A6NJJ6 358 aa14.79□□□□□ -0.04
LMO7-215ENST00000525107 LHX8Q68G74 356 aa14.78□□□□□ -0.04
LMO7-215ENST00000525107 SPDYE2BA6NHP3 402 aa14.76□□□□□ -0.05
LMO7-215ENST00000525107 SPDYE6P0CI01 402 aa14.76□□□□□ -0.05
LMO7-215ENST00000525107 SPDYE2Q495Y8 402 aa14.76□□□□□ -0.05
LMO7-215ENST00000525107 GABBR2O75899 941 aa14.75□□□□□ -0.05
LMO7-215ENST00000525107 SLC4A1APQ9BWU0 796 aaKnown RBP14.74□□□□□ -0.05
LMO7-215ENST00000525107 CLEC11AQ9Y240 323 aa14.7□□□□□ -0.06
LMO7-215ENST00000525107 SPDYE1Q8NFV5 336 aaPredicted RBP14.68□□□□□ -0.06
LMO7-215ENST00000525107 FBLN2P98095 1184 aa14.61□□□□□ -0.07
LMO7-215ENST00000525107 ZBTB22O15209 634 aa14.54□□□□□ -0.08
LMO7-215ENST00000525107 CHADLQ6NUI6 762 aa14.53□□□□□ -0.08
LMO7-215ENST00000525107 ATXN8OSP0DMR3 200 aa14.52□□□□□ -0.09
LMO7-215ENST00000525107 SSUH2Q9Y2M2 353 aa14.51□□□□□ -0.09
LMO7-215ENST00000525107 MKRN4PQ13434 485 aaPredicted RBP14.49□□□□□ -0.09
LMO7-215ENST00000525107 ZNF692Q9BU19 519 aaPredicted RBP14.48□□□□□ -0.09
LMO7-215ENST00000525107 POTEIP0CG38 1075 aa14.46□□□□□ -0.09
LMO7-215ENST00000525107 PLSCR2Q9NRY7 297 aa14.43□□□□□ -0.1
LMO7-215ENST00000525107 PRR29P0C7W0 189 aa14.35□□□□□ -0.11
LMO7-215ENST00000525107 CD44P16070 742 aaKnown RBP14.31□□□□□ -0.12
LMO7-215ENST00000525107 PABPN1Q86U42 306 aaKnown RBP eCLIP14.26□□□□□ -0.13
LMO7-215ENST00000525107 FARP1Q9Y4F1 1045 aaPredicted RBP14.23□□□□□ -0.13
LMO7-215ENST00000525107 CLCN6P51797 869 aa14.2□□□□□ -0.14
LMO7-215ENST00000525107 DCBLD2Q96PD2 775 aa14.17□□□□□ -0.14
LMO7-215ENST00000525107 ZNF579Q8NAF0 562 aaKnown RBP14.06□□□□□ -0.16
LMO7-215ENST00000525107 OTUD5Q96G74 571 aa14.05□□□□□ -0.16
LMO7-215ENST00000525107 ZRANB1Q9UGI0 708 aa14□□□□□ -0.17
LMO7-215ENST00000525107 POTEB2H3BUK9 544 aa13.98□□□□□ -0.17
LMO7-215ENST00000525107 GALR2O43603 387 aaPredicted RBP13.96□□□□□ -0.17
LMO7-215ENST00000525107 POTEMA6NI47 508 aa13.95□□□□□ -0.18
LMO7-215ENST00000525107 CSRNP3Q8WYN3 585 aa13.9□□□□□ -0.18
LMO7-215ENST00000525107 POTEGQ6S5H5 508 aa13.89□□□□□ -0.19
LMO7-215ENST00000525107 CREBZFQ9NS37 354 aa13.87□□□□□ -0.19
LMO7-215ENST00000525107 EHMT2Q96KQ7 1210 aa13.83□□□□□ -0.2
LMO7-215ENST00000525107 PELP1Q8IZL8 1130 aaKnown RBP13.78□□□□□ -0.2
LMO7-215ENST00000525107 PHF12Q96QT6 1004 aa13.77□□□□□ -0.21
LMO7-215ENST00000525107 PCDH10Q9P2E7 1040 aa13.72□□□□□ -0.21
LMO7-215ENST00000525107 PAK3O75914 559 aaPredicted RBP13.68□□□□□ -0.22
LMO7-215ENST00000525107 POTEJP0CG39 1038 aa13.67□□□□□ -0.22
LMO7-215ENST00000525107 STAG3Q9UJ98 1225 aa13.67□□□□□ -0.22
LMO7-215ENST00000525107 METRNQ9UJH8 293 aa13.63□□□□□ -0.23
LMO7-215ENST00000525107 LCE2DQ5TA82 110 aaPredicted RBP13.61□□□□□ -0.23
LMO7-215ENST00000525107 ASTLQ6HA08 431 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms