RNA–Protein interactions for RNA: ENST00000524625.5

ATG13-203, Transcript of autophagy related 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG13, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-203ENST00000524625 NISCHQ9Y2I1 1504 aa15.56■□□□□ 0.08
ATG13-203ENST00000524625 DCAF8L2P0C7V8 631 aa14.47□□□□□ -0.09
ATG13-203ENST00000524625 SHROOM4Q9ULL8 1493 aa14.41□□□□□ -0.1
ATG13-203ENST00000524625 SUPT5HO00267 1087 aaKnown RBP14.38□□□□□ -0.11
ATG13-203ENST00000524625 HRCP23327 699 aa13.81□□□□□ -0.2
ATG13-203ENST00000524625 PPARGC1BQ86YN6 1023 aaKnown RBP13.78□□□□□ -0.2
ATG13-203ENST00000524625 PELP1Q8IZL8 1130 aaKnown RBP13.67□□□□□ -0.22
ATG13-203ENST00000524625 PCGF6Q9BYE7 350 aa13.65□□□□□ -0.22
ATG13-203ENST00000524625 EHMT2Q96KQ7 1210 aa13.64□□□□□ -0.23
ATG13-203ENST00000524625 FAM9AQ8IZU1 332 aaPredicted RBP13.45□□□□□ -0.26
ATG13-203ENST00000524625 CHIC1Q5VXU3 224 aa13.42□□□□□ -0.26
ATG13-203ENST00000524625 SCAF1Q9H7N4 1312 aaKnown RBP13.35□□□□□ -0.27
ATG13-203ENST00000524625 MYT1Q01538 1121 aa13.35□□□□□ -0.27
ATG13-203ENST00000524625 LOC105371045A0A1W2PR82 267 aa13.32□□□□□ -0.28
ATG13-203ENST00000524625 TRIM41Q8WV44 630 aa13.22□□□□□ -0.29
ATG13-203ENST00000524625 TTBK1Q5TCY1 1321 aaPredicted RBP13.2□□□□□ -0.3
ATG13-203ENST00000524625 MYO15BQ96JP2 1530 aa13.16□□□□□ -0.3
ATG13-203ENST00000524625 TRIM26Q12899 539 aaPredicted RBP13.06□□□□□ -0.32
ATG13-203ENST00000524625 ZCCHC6Q5VYS8 1495 aaKnown RBP13.05□□□□□ -0.32
ATG13-203ENST00000524625 ZEB1P37275 1124 aaPredicted RBP12.94□□□□□ -0.34
ATG13-203ENST00000524625 CCER1Q8TC90 406 aaPredicted RBP12.94□□□□□ -0.34
ATG13-203ENST00000524625 NEUROD1Q13562 356 aa12.89□□□□□ -0.35
ATG13-203ENST00000524625 RANGAP1P46060 587 aaPredicted RBP12.87□□□□□ -0.35
ATG13-203ENST00000524625 GTF3C3Q9Y5Q9 886 aa12.85□□□□□ -0.35
ATG13-203ENST00000524625 ACIN1Q9UKV3 1341 aaKnown RBP12.84□□□□□ -0.35
ATG13-203ENST00000524625 UBTFP17480 764 aaKnown RBP12.8□□□□□ -0.36
ATG13-203ENST00000524625 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.76□□□□□ -0.37
ATG13-203ENST00000524625 CCDC180Q9P1Z9 1646 aa12.76□□□□□ -0.37
ATG13-203ENST00000524625 APLP2Q06481 763 aa12.76□□□□□ -0.37
ATG13-203ENST00000524625 ABCC9O60706 1549 aa12.72□□□□□ -0.37
ATG13-203ENST00000524625 DCAF1Q9Y4B6 1507 aa12.72□□□□□ -0.37
ATG13-203ENST00000524625 YTHDC1Q96MU7 727 aaKnown RBP12.68□□□□□ -0.38
ATG13-203ENST00000524625 CENPBP07199 599 aaPredicted RBP12.66□□□□□ -0.38
ATG13-203ENST00000524625 SCRIBQ14160 1630 aa12.65□□□□□ -0.39
ATG13-203ENST00000524625 PRKCSHP14314 528 aaPredicted RBP12.64□□□□□ -0.39
ATG13-203ENST00000524625 HNRNPUL2Q1KMD3 747 aaKnown RBP12.58□□□□□ -0.4
ATG13-203ENST00000524625 BCL11AQ9H165 835 aa12.57□□□□□ -0.4
ATG13-203ENST00000524625 RSF1Q96T23 1441 aaPredicted RBP12.52□□□□□ -0.41
ATG13-203ENST00000524625 DIEXFQ68CQ4 756 aaKnown RBP12.52□□□□□ -0.41
ATG13-203ENST00000524625 PABPN1Q86U42 306 aaKnown RBP eCLIP12.5□□□□□ -0.41
ATG13-203ENST00000524625 ATP1B4Q9UN42 357 aaPredicted RBP12.43□□□□□ -0.42
ATG13-203ENST00000524625 ITGAEP38570 1179 aa12.41□□□□□ -0.42
ATG13-203ENST00000524625 ERICH6Q7L0X2 663 aa12.36□□□□□ -0.43
ATG13-203ENST00000524625 CSRNP3Q8WYN3 585 aa12.34□□□□□ -0.43
ATG13-203ENST00000524625 CECR2Q9BXF3 1484 aa12.32□□□□□ -0.44
ATG13-203ENST00000524625 RB1CC1Q8TDY2 1594 aa12.32□□□□□ -0.44
ATG13-203ENST00000524625 ZNF316A6NFI3 1004 aaPredicted RBP12.27□□□□□ -0.45
ATG13-203ENST00000524625 ANP32EQ9BTT0 268 aa12.25□□□□□ -0.45
ATG13-203ENST00000524625 MIER1Q8N108 512 aa12.2□□□□□ -0.46
ATG13-203ENST00000524625 MROH2BQ7Z745 1585 aa12.19□□□□□ -0.46
ATG13-203ENST00000524625 CEP162Q5TB80 1403 aa12.16□□□□□ -0.46
ATG13-203ENST00000524625 TSHZ2Q9NRE2 1034 aa12.13□□□□□ -0.47
ATG13-203ENST00000524625 SOGA1O94964 1423 aa12.1□□□□□ -0.47
ATG13-203ENST00000524625 FAM50AQ14320 339 aaKnown RBP12.09□□□□□ -0.47
ATG13-203ENST00000524625 NACADO15069 1562 aa12.09□□□□□ -0.47
ATG13-203ENST00000524625 SUPT16HQ9Y5B9 1047 aaKnown RBP12.09□□□□□ -0.47
ATG13-203ENST00000524625 ABCC8Q09428 1581 aa12.08□□□□□ -0.48
ATG13-203ENST00000524625 NEFLP07196 543 aa12.07□□□□□ -0.48
ATG13-203ENST00000524625 WIZO95785 1651 aa12.07□□□□□ -0.48
ATG13-203ENST00000524625 CCDC88BA6NC98 1476 aa12.05□□□□□ -0.48
ATG13-203ENST00000524625 BCANQ96GW7 911 aa12.04□□□□□ -0.48
ATG13-203ENST00000524625 P3H3Q8IVL6 736 aa12.04□□□□□ -0.48
ATG13-203ENST00000524625 CLIP1P30622 1438 aa12.03□□□□□ -0.48
ATG13-203ENST00000524625 TNIKQ9UKE5 1360 aa12.02□□□□□ -0.48
ATG13-203ENST00000524625 BAZ1AQ9NRL2 1556 aaPredicted RBP12.01□□□□□ -0.49
ATG13-203ENST00000524625 WRNQ14191 1432 aaPredicted RBP eCLIP12□□□□□ -0.49
ATG13-203ENST00000524625 GOLGA3Q08378 1498 aa12□□□□□ -0.49
ATG13-203ENST00000524625 CNGB1Q14028 1251 aaPredicted RBP11.99□□□□□ -0.49
ATG13-203ENST00000524625 EEA1Q15075 1411 aa11.95□□□□□ -0.5
ATG13-203ENST00000524625 RUSC2Q8N2Y8 1516 aa11.92□□□□□ -0.5
ATG13-203ENST00000524625 POLR3GLQ9BT43 218 aa11.91□□□□□ -0.5
ATG13-203ENST00000524625 CEP164Q9UPV0 1460 aa11.88□□□□□ -0.51
ATG13-203ENST00000524625 HIRIP3Q9BW71 556 aaPredicted RBP11.88□□□□□ -0.51
ATG13-203ENST00000524625 DDX10Q13206 875 aaKnown RBP11.87□□□□□ -0.51
ATG13-203ENST00000524625 SLC24A1O60721 1099 aa11.87□□□□□ -0.51
ATG13-203ENST00000524625 ARID3CA6NKF2 412 aa11.84□□□□□ -0.51
ATG13-203ENST00000524625 TRIM52Q96A61 297 aa11.83□□□□□ -0.51
ATG13-203ENST00000524625 TOP2AP11388 1531 aaKnown RBP11.83□□□□□ -0.52
ATG13-203ENST00000524625 BAZ1BQ9UIG0 1483 aaKnown RBP11.83□□□□□ -0.52
ATG13-203ENST00000524625 ANP32CO43423 234 aa11.82□□□□□ -0.52
ATG13-203ENST00000524625 RBM19Q9Y4C8 960 aaKnown RBP11.82□□□□□ -0.52
ATG13-203ENST00000524625 ANO8Q9HCE9 1232 aaPredicted RBP11.81□□□□□ -0.52
ATG13-203ENST00000524625 KANK4Q5T7N3 995 aaPredicted RBP11.8□□□□□ -0.52
ATG13-203ENST00000524625 FKBP8Q14318 412 aa11.8□□□□□ -0.52
ATG13-203ENST00000524625 MSH5O43196 834 aa11.79□□□□□ -0.52
ATG13-203ENST00000524625 VPS8Q8N3P4 1428 aa11.78□□□□□ -0.52
ATG13-203ENST00000524625 KCNH8Q96L42 1107 aa11.77□□□□□ -0.53
ATG13-203ENST00000524625 SMARCA4P51532 1647 aa11.75□□□□□ -0.53
ATG13-203ENST00000524625 SIN3AQ96ST3 1273 aa11.74□□□□□ -0.53
ATG13-203ENST00000524625 RAPGEF2Q9Y4G8 1499 aa11.74□□□□□ -0.53
ATG13-203ENST00000524625 EIF5BO60841 1220 aaKnown RBP11.73□□□□□ -0.53
ATG13-203ENST00000524625 CLSPNQ9HAW4 1339 aa11.73□□□□□ -0.53
ATG13-203ENST00000524625 SMARCA2P51531 1590 aa11.72□□□□□ -0.53
ATG13-203ENST00000524625 CCDC136Q96JN2 1154 aa11.72□□□□□ -0.53
ATG13-203ENST00000524625 ZNF326Q5BKZ1 582 aaKnown RBP11.71□□□□□ -0.53
ATG13-203ENST00000524625 TONSLQ96HA7 1378 aa11.71□□□□□ -0.54
ATG13-203ENST00000524625 CHIC2Q9UKJ5 165 aa11.7□□□□□ -0.54
ATG13-203ENST00000524625 KIF27Q86VH2 1401 aa11.7□□□□□ -0.54
ATG13-203ENST00000524625 CCNB3Q8WWL7 1395 aa11.67□□□□□ -0.54
ATG13-203ENST00000524625 HNRNPUQ00839 825 aaKnown RBP eCLIP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms