RNA–Protein interactions for RNA: ENST00000524465.5

GEN1-203, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 4

Gene GEN1, Length 593 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-203ENST00000524465 AEBP2Q6ZN18 517 aaPredicted RBP21.31■■□□□ 1
GEN1-203ENST00000524465 CHIC1Q5VXU3 224 aa20.51■□□□□ 0.87
GEN1-203ENST00000524465 SENP3Q9H4L4 574 aaPredicted RBP18.22■□□□□ 0.51
GEN1-203ENST00000524465 PHF23Q9BUL5 403 aaPredicted RBP17.96■□□□□ 0.47
GEN1-203ENST00000524465 FOXD1Q16676 465 aa16.89■□□□□ 0.29
GEN1-203ENST00000524465 PLPPR3Q6T4P5 718 aa16.52■□□□□ 0.24
GEN1-203ENST00000524465 PPP6R1Q9UPN7 881 aa15.95■□□□□ 0.14
GEN1-203ENST00000524465 ADRA2BP18089 450 aa15.91■□□□□ 0.14
GEN1-203ENST00000524465 PIAS4Q8N2W9 510 aaPredicted RBP15.85■□□□□ 0.13
GEN1-203ENST00000524465 MSH5O43196 834 aa15.78■□□□□ 0.12
GEN1-203ENST00000524465 POTEDQ86YR6 584 aa14.92□□□□□ -0.02
GEN1-203ENST00000524465 SCAF1Q9H7N4 1312 aaKnown RBP14.66□□□□□ -0.06
GEN1-203ENST00000524465 MAPK8IP2Q13387 824 aaPredicted RBP14.52□□□□□ -0.09
GEN1-203ENST00000524465 PPP4R3CPQ6ZMV5 832 aa14.48□□□□□ -0.09
GEN1-203ENST00000524465 DMRT2Q9Y5R5 561 aa14.47□□□□□ -0.09
GEN1-203ENST00000524465 CNKSR2Q8WXI2 1034 aa14.19□□□□□ -0.14
GEN1-203ENST00000524465 NCBP3Q53F19 620 aaKnown RBP14.05□□□□□ -0.16
GEN1-203ENST00000524465 HOXD11P31277 338 aaPredicted RBP14.04□□□□□ -0.16
GEN1-203ENST00000524465 RNF216Q9NWF9 866 aaPredicted RBP14.01□□□□□ -0.17
GEN1-203ENST00000524465 DCAF8L1A6NGE4 600 aa13.79□□□□□ -0.2
GEN1-203ENST00000524465 NPM3O75607 178 aaKnown RBP13.79□□□□□ -0.2
GEN1-203ENST00000524465 KCNA4P22459 653 aa13.72□□□□□ -0.21
GEN1-203ENST00000524465 DNAJC5BQ9UF47 199 aa13.59□□□□□ -0.23
GEN1-203ENST00000524465 RNF39Q9H2S5 420 aa13.46□□□□□ -0.25
GEN1-203ENST00000524465 CACNB1Q02641 598 aaPredicted RBP13.34□□□□□ -0.27
GEN1-203ENST00000524465 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.34□□□□□ -0.278e-13■■■■□ 21.9
GEN1-203ENST00000524465 C1QBPQ07021 282 aaKnown RBP13.31□□□□□ -0.28
GEN1-203ENST00000524465 SLC4A2P04920 1241 aa13.1□□□□□ -0.31
GEN1-203ENST00000524465 U3KPZ7 1027 aaPredicted RBP13.09□□□□□ -0.31
GEN1-203ENST00000524465 SLC4A1APQ9BWU0 796 aaKnown RBP13.02□□□□□ -0.33
GEN1-203ENST00000524465 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.88□□□□□ -0.35
GEN1-203ENST00000524465 HNRNPUL2Q1KMD3 747 aaKnown RBP12.88□□□□□ -0.35
GEN1-203ENST00000524465 APLP2Q06481 763 aa12.84□□□□□ -0.35
GEN1-203ENST00000524465 SAMD1Q6SPF0 538 aaPredicted RBP12.8□□□□□ -0.36
GEN1-203ENST00000524465 MYCNP04198 464 aaPredicted RBP12.79□□□□□ -0.36
GEN1-203ENST00000524465 SPINK5Q9NQ38 1064 aaPredicted RBP12.79□□□□□ -0.36
GEN1-203ENST00000524465 CAPN15O75808 1086 aa12.78□□□□□ -0.36
GEN1-203ENST00000524465 FOXD4L1Q9NU39 408 aa12.77□□□□□ -0.37
GEN1-203ENST00000524465 ZNF219Q9P2Y4 722 aaPredicted RBP12.68□□□□□ -0.38
GEN1-203ENST00000524465 DSG3P32926 999 aa12.67□□□□□ -0.38
GEN1-203ENST00000524465 TRHP20396 242 aaPredicted RBP12.62□□□□□ -0.39
GEN1-203ENST00000524465 ZBTB22O15209 634 aa12.6□□□□□ -0.39
GEN1-203ENST00000524465 ABCB7O75027 752 aa12.47□□□□□ -0.41
GEN1-203ENST00000524465 ATXN8OSP0DMR3 200 aa12.41□□□□□ -0.42
GEN1-203ENST00000524465 ATF5Q9Y2D1 282 aaPredicted RBP12.39□□□□□ -0.43
GEN1-203ENST00000524465 POLA2Q14181 598 aa12.35□□□□□ -0.43
GEN1-203ENST00000524465 CSRNP3Q8WYN3 585 aa12.26□□□□□ -0.45
GEN1-203ENST00000524465 ZBTB12Q9Y330 459 aaPredicted RBP12.21□□□□□ -0.45
GEN1-203ENST00000524465 EHMT2Q96KQ7 1210 aa12.19□□□□□ -0.46
GEN1-203ENST00000524465 RBM42Q9BTD8 480 aaKnown RBP12.14□□□□□ -0.47
GEN1-203ENST00000524465 FBLN2P98095 1184 aa11.98□□□□□ -0.49
GEN1-203ENST00000524465 OSCARQ8IYS5 282 aa11.94□□□□□ -0.5
GEN1-203ENST00000524465 AKT1S1Q96B36 256 aa11.9□□□□□ -0.5
GEN1-203ENST00000524465 MKRN4PQ13434 485 aaPredicted RBP11.86□□□□□ -0.51
GEN1-203ENST00000524465 SPDYE2BA6NHP3 402 aa11.82□□□□□ -0.52
GEN1-203ENST00000524465 SPDYE6P0CI01 402 aa11.82□□□□□ -0.52
GEN1-203ENST00000524465 SPDYE2Q495Y8 402 aa11.82□□□□□ -0.52
GEN1-203ENST00000524465 POTEHQ6S545 545 aa11.76□□□□□ -0.53
GEN1-203ENST00000524465 REM2Q8IYK8 340 aaPredicted RBP11.75□□□□□ -0.53
GEN1-203ENST00000524465 CHRDL2Q6WN34 429 aa11.73□□□□□ -0.53
GEN1-203ENST00000524465 ZNF692Q9BU19 519 aaPredicted RBP11.68□□□□□ -0.54
GEN1-203ENST00000524465 SSUH2Q9Y2M2 353 aa11.68□□□□□ -0.54
GEN1-203ENST00000524465 PITPNM1O00562 1244 aa11.61□□□□□ -0.55
GEN1-203ENST00000524465 SPDYE1Q8NFV5 336 aaPredicted RBP11.55□□□□□ -0.56
GEN1-203ENST00000524465 PABPN1Q86U42 306 aaKnown RBP eCLIP11.51□□□□□ -0.57
GEN1-203ENST00000524465 FXR2P51116 673 aaKnown RBP eCLIP11.49□□□□□ -0.57
GEN1-203ENST00000524465 PIP4P2Q8N4L2 257 aa11.49□□□□□ -0.57
GEN1-203ENST00000524465 SPDYE4A6NLX3 237 aa11.45□□□□□ -0.58
GEN1-203ENST00000524465 CLEC11AQ9Y240 323 aa11.45□□□□□ -0.58
GEN1-203ENST00000524465 PRR29P0C7W0 189 aa11.34□□□□□ -0.59
GEN1-203ENST00000524465 PRKAR2AP13861 404 aaKnown RBP11.31□□□□□ -0.6
GEN1-203ENST00000524465 STAG3Q9UJ98 1225 aa11.3□□□□□ -0.6
GEN1-203ENST00000524465 PROM2Q8N271 834 aa11.25□□□□□ -0.61
GEN1-203ENST00000524465 HAX1O00165 279 aa11.21□□□□□ -0.61
GEN1-203ENST00000524465 CHADLQ6NUI6 762 aa11.19□□□□□ -0.62
GEN1-203ENST00000524465 SP7Q8TDD2 431 aaPredicted RBP11.15□□□□□ -0.62
GEN1-203ENST00000524465 C19orf67A6NJJ6 358 aa11.11□□□□□ -0.63
GEN1-203ENST00000524465 FARP1Q9Y4F1 1045 aaPredicted RBP11.11□□□□□ -0.63
GEN1-203ENST00000524465 CREBZFQ9NS37 354 aa11.1□□□□□ -0.63
GEN1-203ENST00000524465 FKBP8Q14318 412 aa11.09□□□□□ -0.63
GEN1-203ENST00000524465 EVX2Q03828 476 aa11.04□□□□□ -0.64
GEN1-203ENST00000524465 CD44P16070 742 aaKnown RBP10.97□□□□□ -0.65
GEN1-203ENST00000524465 NPM1P06748 294 aaKnown RBP eCLIP10.95□□□□□ -0.66
GEN1-203ENST00000524465 MNX1P50219 401 aaPredicted RBP10.95□□□□□ -0.66
GEN1-203ENST00000524465 PLEKHG5O94827 1062 aa10.91□□□□□ -0.66
GEN1-203ENST00000524465 CLCN6P51797 869 aa10.89□□□□□ -0.67
GEN1-203ENST00000524465 MIER1Q8N108 512 aa10.88□□□□□ -0.67
GEN1-203ENST00000524465 FBXO3Q9UK99 471 aa10.87□□□□□ -0.67
GEN1-203ENST00000524465 GABBR2O75899 941 aa10.86□□□□□ -0.67
GEN1-203ENST00000524465 PAK3O75914 559 aaPredicted RBP10.85□□□□□ -0.67
GEN1-203ENST00000524465 ZNF579Q8NAF0 562 aaKnown RBP10.84□□□□□ -0.67
GEN1-203ENST00000524465 ZRANB1Q9UGI0 708 aa10.84□□□□□ -0.67
GEN1-203ENST00000524465 PLCD3Q8N3E9 789 aa10.83□□□□□ -0.68
GEN1-203ENST00000524465 ZBTB47Q9UFB7 747 aaPredicted RBP10.8□□□□□ -0.68
GEN1-203ENST00000524465 VASPP50552 380 aaPredicted RBP10.69□□□□□ -0.7
GEN1-203ENST00000524465 PHF12Q96QT6 1004 aa10.69□□□□□ -0.7
GEN1-203ENST00000524465 TSPYL2Q9H2G4 693 aaPredicted RBP10.69□□□□□ -0.7
GEN1-203ENST00000524465 RASEFQ8IZ41 740 aa10.67□□□□□ -0.7
GEN1-203ENST00000524465 CCDC61Q9Y6R9 512 aa10.67□□□□□ -0.7
GEN1-203ENST00000524465 GALR2O43603 387 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms