RNA–Protein interactions for RNA: ENST00000524280.5

TNIP1-219, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene TNIP1, Length 1,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-219ENST00000524280 NISCHQ9Y2I1 1504 aa34.38■■■■□ 3.09
TNIP1-219ENST00000524280 CCDC180Q9P1Z9 1646 aa29.76■■■□□ 2.35
TNIP1-219ENST00000524280 ZCCHC6Q5VYS8 1495 aaKnown RBP28.95■■■□□ 2.22
TNIP1-219ENST00000524280 DCAF1Q9Y4B6 1507 aa28.45■■■□□ 2.15
TNIP1-219ENST00000524280 SHROOM4Q9ULL8 1493 aa28.27■■■□□ 2.12
TNIP1-219ENST00000524280 DCAF8L2P0C7V8 631 aa28.24■■■□□ 2.11
TNIP1-219ENST00000524280 MYO15BQ96JP2 1530 aa27.98■■■□□ 2.07
TNIP1-219ENST00000524280 ABCC9O60706 1549 aa27.8■■■□□ 2.04
TNIP1-219ENST00000524280 NACADO15069 1562 aa27.67■■■□□ 2.02
TNIP1-219ENST00000524280 SUPT5HO00267 1087 aaKnown RBP27.41■■□□□ 1.98
TNIP1-219ENST00000524280 SCRIBQ14160 1630 aa27.4■■□□□ 1.98
TNIP1-219ENST00000524280 RB1CC1Q8TDY2 1594 aa27.31■■□□□ 1.96
TNIP1-219ENST00000524280 RSF1Q96T23 1441 aaPredicted RBP26.82■■□□□ 1.88
TNIP1-219ENST00000524280 UNC13AQ9UPW8 1703 aa26.74■■□□□ 1.87
TNIP1-219ENST00000524280 CECR2Q9BXF3 1484 aa26.67■■□□□ 1.86
TNIP1-219ENST00000524280 MROH2BQ7Z745 1585 aa26.56■■□□□ 1.84
TNIP1-219ENST00000524280 BAZ1AQ9NRL2 1556 aaPredicted RBP26.5■■□□□ 1.83
TNIP1-219ENST00000524280 BICRAQ9NZM4 1560 aa26.49■■□□□ 1.83
TNIP1-219ENST00000524280 CHIC1Q5VXU3 224 aa26.48■■□□□ 1.83
TNIP1-219ENST00000524280 WIZO95785 1651 aa26.34■■□□□ 1.81
TNIP1-219ENST00000524280 SMARCA4P51532 1647 aa26.32■■□□□ 1.8
TNIP1-219ENST00000524280 PABPN1Q86U42 306 aaKnown RBP eCLIP26.31■■□□□ 1.8
TNIP1-219ENST00000524280 TOP2AP11388 1531 aaKnown RBP26.1■■□□□ 1.77
TNIP1-219ENST00000524280 PEG3Q9GZU2 1588 aa26.02■■□□□ 1.76
TNIP1-219ENST00000524280 SMARCA2P51531 1590 aa25.86■■□□□ 1.73
TNIP1-219ENST00000524280 CCDC88BA6NC98 1476 aa25.85■■□□□ 1.73
TNIP1-219ENST00000524280 ATAD2BQ9ULI0 1458 aa25.82■■□□□ 1.72
TNIP1-219ENST00000524280 EIF4G1Q04637 1599 aaKnown RBP25.79■■□□□ 1.72
TNIP1-219ENST00000524280 TRIM41Q8WV44 630 aa25.77■■□□□ 1.72
TNIP1-219ENST00000524280 BAZ1BQ9UIG0 1483 aaKnown RBP25.68■■□□□ 1.7
TNIP1-219ENST00000524280 NCAPD3P42695 1498 aa25.56■■□□□ 1.68
TNIP1-219ENST00000524280 HMGXB3Q12766 1538 aa25.52■■□□□ 1.68
TNIP1-219ENST00000524280 LOC105371045A0A1W2PR82 267 aa25.46■■□□□ 1.67
TNIP1-219ENST00000524280 ABCC8Q09428 1581 aa25.39■■□□□ 1.65
TNIP1-219ENST00000524280 FAM9AQ8IZU1 332 aaPredicted RBP25.27■■□□□ 1.64
TNIP1-219ENST00000524280 WRNQ14191 1432 aaPredicted RBP eCLIP25.22■■□□□ 1.63
TNIP1-219ENST00000524280 CC2D2AQ9P2K1 1620 aa25.17■■□□□ 1.62
TNIP1-219ENST00000524280 EEA1Q15075 1411 aa25.1■■□□□ 1.61
TNIP1-219ENST00000524280 CFTRP13569 1480 aa25.08■■□□□ 1.61
TNIP1-219ENST00000524280 SYNJ1O43426 1573 aa25.07■■□□□ 1.6
TNIP1-219ENST00000524280 SOGA1O94964 1423 aa25.03■■□□□ 1.6
TNIP1-219ENST00000524280 TOP2BQ02880 1626 aa24.97■■□□□ 1.59
TNIP1-219ENST00000524280 BIVM-ERCC5R4GMW8 1640 aa24.93■■□□□ 1.58
TNIP1-219ENST00000524280 CSRNP3Q8WYN3 585 aa24.92■■□□□ 1.58
TNIP1-219ENST00000524280 CADPSQ9ULU8 1353 aa24.92■■□□□ 1.58
TNIP1-219ENST00000524280 PRDM2Q13029 1718 aa24.91■■□□□ 1.58
TNIP1-219ENST00000524280 RUSC2Q8N2Y8 1516 aa24.9■■□□□ 1.58
TNIP1-219ENST00000524280 EHMT2Q96KQ7 1210 aa24.86■■□□□ 1.57
TNIP1-219ENST00000524280 CUX1P39880 1505 aa24.81■■□□□ 1.56
TNIP1-219ENST00000524280 TNIKQ9UKE5 1360 aa24.77■■□□□ 1.56
TNIP1-219ENST00000524280 GOLGA3Q08378 1498 aa24.74■■□□□ 1.55
TNIP1-219ENST00000524280 KIF21BO75037 1637 aa24.71■■□□□ 1.55
TNIP1-219ENST00000524280 CEP164Q9UPV0 1460 aa24.71■■□□□ 1.55
TNIP1-219ENST00000524280 PCGF6Q9BYE7 350 aa24.69■■□□□ 1.54
TNIP1-219ENST00000524280 TRIM26Q12899 539 aaPredicted RBP24.65■■□□□ 1.54
TNIP1-219ENST00000524280 FANCD2Q9BXW9 1451 aa24.62■■□□□ 1.53
TNIP1-219ENST00000524280 CEP162Q5TB80 1403 aa24.62■■□□□ 1.53
TNIP1-219ENST00000524280 UBTFP17480 764 aaKnown RBP24.61■■□□□ 1.53
TNIP1-219ENST00000524280 LAMC3Q9Y6N6 1575 aa24.59■■□□□ 1.53
TNIP1-219ENST00000524280 KIF27Q86VH2 1401 aa24.57■■□□□ 1.52
TNIP1-219ENST00000524280 NESP48681 1621 aa24.53■■□□□ 1.52
TNIP1-219ENST00000524280 PRXQ9BXM0 1461 aa24.51■■□□□ 1.51
TNIP1-219ENST00000524280 RAPGEF2Q9Y4G8 1499 aa24.5■■□□□ 1.51
TNIP1-219ENST00000524280 ERICH3Q5RHP9 1530 aa24.49■■□□□ 1.51
TNIP1-219ENST00000524280 FGD5Q6ZNL6 1462 aa24.47■■□□□ 1.51
TNIP1-219ENST00000524280 DNMBPQ6XZF7 1577 aa24.46■■□□□ 1.51
TNIP1-219ENST00000524280 DNAJC5BQ9UF47 199 aa24.43■■□□□ 1.5
TNIP1-219ENST00000524280 PDS5BQ9NTI5 1447 aa24.41■■□□□ 1.5
TNIP1-219ENST00000524280 TOPBP1Q92547 1522 aa24.4■■□□□ 1.5
TNIP1-219ENST00000524280 CUX2O14529 1486 aa24.39■■□□□ 1.49
TNIP1-219ENST00000524280 CLIP1P30622 1438 aa24.35■■□□□ 1.49
TNIP1-219ENST00000524280 HRCP23327 699 aa24.33■■□□□ 1.49
TNIP1-219ENST00000524280 IGF1RP08069 1367 aa24.32■■□□□ 1.48
TNIP1-219ENST00000524280 POLA1P09884 1462 aaPredicted RBP24.3■■□□□ 1.48
TNIP1-219ENST00000524280 ABCA10Q8WWZ4 1543 aa24.29■■□□□ 1.48
TNIP1-219ENST00000524280 URB2Q14146 1524 aaKnown RBP24.29■■□□□ 1.48
TNIP1-219ENST00000524280 RAD54L2Q9Y4B4 1467 aa24.22■■□□□ 1.47
TNIP1-219ENST00000524280 CARMIL1Q5VZK9 1371 aa24.21■■□□□ 1.47
TNIP1-219ENST00000524280 VPS8Q8N3P4 1428 aa24.2■■□□□ 1.47
TNIP1-219ENST00000524280 KIF21AQ7Z4S6 1674 aa24.2■■□□□ 1.47
TNIP1-219ENST00000524280 PPARGC1BQ86YN6 1023 aaKnown RBP24.19■■□□□ 1.46
TNIP1-219ENST00000524280 WDR97A6NE52 1622 aa24.13■■□□□ 1.45
TNIP1-219ENST00000524280 ARAP1Q96P48 1450 aa24.06■■□□□ 1.44
TNIP1-219ENST00000524280 CUL7Q14999 1698 aa24.06■■□□□ 1.44
TNIP1-219ENST00000524280 MRC2Q9UBG0 1479 aa24.05■■□□□ 1.44
TNIP1-219ENST00000524280 RANGAP1P46060 587 aaPredicted RBP24.04■■□□□ 1.44
TNIP1-219ENST00000524280 ABCA5Q8WWZ7 1642 aa24.03■■□□□ 1.44
TNIP1-219ENST00000524280 ARHGAP35Q9NRY4 1499 aa24■■□□□ 1.43
TNIP1-219ENST00000524280 TARBP1Q13395 1621 aaKnown RBP23.99■■□□□ 1.43
TNIP1-219ENST00000524280 APLP2Q06481 763 aa23.98■■□□□ 1.43
TNIP1-219ENST00000524280 GAPVD1Q14C86 1478 aa23.98■■□□□ 1.43
TNIP1-219ENST00000524280 TDRD9Q8NDG6 1382 aaKnown RBP23.96■■□□□ 1.43
TNIP1-219ENST00000524280 WDR62O43379 1518 aa23.91■■□□□ 1.42
TNIP1-219ENST00000524280 TTBK1Q5TCY1 1321 aaPredicted RBP23.89■■□□□ 1.42
TNIP1-219ENST00000524280 ZEB1P37275 1124 aaPredicted RBP23.89■■□□□ 1.41
TNIP1-219ENST00000524280 IFT140Q96RY7 1462 aa23.83■■□□□ 1.41
TNIP1-219ENST00000524280 CTTNBP2Q8WZ74 1663 aa23.82■■□□□ 1.4
TNIP1-219ENST00000524280 ERCC6Q03468 1493 aa23.79■■□□□ 1.4
TNIP1-219ENST00000524280 EFCAB5A4FU69 1503 aa23.79■■□□□ 1.4
TNIP1-219ENST00000524280 PBRM1Q86U86 1689 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms