RNA–Protein interactions for RNA: ENST00000523928.1

NIPA2P4-201, Transcript of NIPA magnesium transporter 2 pseudogene 4, humanhuman

BASIC

Gene NIPA2P4, Length 1,341 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPA2P4-201ENST00000523928 AEBP2Q6ZN18 517 aaPredicted RBP32.02■■■□□ 2.72
NIPA2P4-201ENST00000523928 CHIC1Q5VXU3 224 aa30.34■■■□□ 2.45
NIPA2P4-201ENST00000523928 SENP3Q9H4L4 574 aaPredicted RBP27.33■■□□□ 1.97
NIPA2P4-201ENST00000523928 PHF23Q9BUL5 403 aaPredicted RBP26.96■■□□□ 1.91
NIPA2P4-201ENST00000523928 FOXD1Q16676 465 aa25.48■■□□□ 1.67
NIPA2P4-201ENST00000523928 PLPPR3Q6T4P5 718 aa24.2■■□□□ 1.46
NIPA2P4-201ENST00000523928 MSH5O43196 834 aa23.88■■□□□ 1.41
NIPA2P4-201ENST00000523928 PIAS4Q8N2W9 510 aaPredicted RBP23.79■■□□□ 1.4
NIPA2P4-201ENST00000523928 PPP6R1Q9UPN7 881 aa23.77■■□□□ 1.4
NIPA2P4-201ENST00000523928 ADRA2BP18089 450 aa23.67■■□□□ 1.38
NIPA2P4-201ENST00000523928 POTEDQ86YR6 584 aa23.43■■□□□ 1.34
NIPA2P4-201ENST00000523928 NISCHQ9Y2I1 1504 aa22.72■■□□□ 1.23
NIPA2P4-201ENST00000523928 MAPK8IP2Q13387 824 aaPredicted RBP21.78■■□□□ 1.08
NIPA2P4-201ENST00000523928 DMRT2Q9Y5R5 561 aa21.67■■□□□ 1.06
NIPA2P4-201ENST00000523928 SCAF1Q9H7N4 1312 aaKnown RBP21.67■■□□□ 1.06
NIPA2P4-201ENST00000523928 PPP4R3CPQ6ZMV5 832 aa21.2■□□□□ 0.98
NIPA2P4-201ENST00000523928 ABCC9O60706 1549 aa20.89■□□□□ 0.94
NIPA2P4-201ENST00000523928 HOXD11P31277 338 aaPredicted RBP20.84■□□□□ 0.93
NIPA2P4-201ENST00000523928 CNKSR2Q8WXI2 1034 aa20.82■□□□□ 0.92
NIPA2P4-201ENST00000523928 DCAF8L1A6NGE4 600 aa20.76■□□□□ 0.91
NIPA2P4-201ENST00000523928 RNF216Q9NWF9 866 aaPredicted RBP20.66■□□□□ 0.9
NIPA2P4-201ENST00000523928 CCDC180Q9P1Z9 1646 aa20.62■□□□□ 0.89
NIPA2P4-201ENST00000523928 CACNB1Q02641 598 aaPredicted RBP20.53■□□□□ 0.88
NIPA2P4-201ENST00000523928 RNF39Q9H2S5 420 aa20.37■□□□□ 0.85
NIPA2P4-201ENST00000523928 NCBP3Q53F19 620 aaKnown RBP20.36■□□□□ 0.85
NIPA2P4-201ENST00000523928 DNAJC5BQ9UF47 199 aa20.15■□□□□ 0.82
NIPA2P4-201ENST00000523928 NPM3O75607 178 aaKnown RBP20.07■□□□□ 0.8
NIPA2P4-201ENST00000523928 C1QBPQ07021 282 aaKnown RBP20.07■□□□□ 0.8
NIPA2P4-201ENST00000523928 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.84■□□□□ 0.77
NIPA2P4-201ENST00000523928 RB1CC1Q8TDY2 1594 aa19.76■□□□□ 0.75
NIPA2P4-201ENST00000523928 KCNA4P22459 653 aa19.61■□□□□ 0.73
NIPA2P4-201ENST00000523928 NACADO15069 1562 aa19.52■□□□□ 0.72
NIPA2P4-201ENST00000523928 U3KPZ7 1027 aaPredicted RBP19.43■□□□□ 0.7
NIPA2P4-201ENST00000523928 UNC13AQ9UPW8 1703 aa19.38■□□□□ 0.69
NIPA2P4-201ENST00000523928 PABPN1Q86U42 306 aaKnown RBP eCLIP19.34■□□□□ 0.69
NIPA2P4-201ENST00000523928 DCAF8L2P0C7V8 631 aa19.3■□□□□ 0.68
NIPA2P4-201ENST00000523928 SLC4A2P04920 1241 aa19.19■□□□□ 0.66
NIPA2P4-201ENST00000523928 BICRAQ9NZM4 1560 aa19.16■□□□□ 0.66
NIPA2P4-201ENST00000523928 SPINK5Q9NQ38 1064 aaPredicted RBP19.16■□□□□ 0.66
NIPA2P4-201ENST00000523928 CAPN15O75808 1086 aa19.13■□□□□ 0.65
NIPA2P4-201ENST00000523928 MYO15BQ96JP2 1530 aa19.1■□□□□ 0.65
NIPA2P4-201ENST00000523928 DSG3P32926 999 aa19.04■□□□□ 0.64
NIPA2P4-201ENST00000523928 SHROOM4Q9ULL8 1493 aa18.88■□□□□ 0.61
NIPA2P4-201ENST00000523928 APLP2Q06481 763 aa18.88■□□□□ 0.61
NIPA2P4-201ENST00000523928 CC2D2AQ9P2K1 1620 aa18.88■□□□□ 0.61
NIPA2P4-201ENST00000523928 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.85■□□□□ 0.61
NIPA2P4-201ENST00000523928 HNRNPUL2Q1KMD3 747 aaKnown RBP18.85■□□□□ 0.61
NIPA2P4-201ENST00000523928 CECR2Q9BXF3 1484 aa18.85■□□□□ 0.61
NIPA2P4-201ENST00000523928 TRHP20396 242 aaPredicted RBP18.8■□□□□ 0.6
NIPA2P4-201ENST00000523928 SCRIBQ14160 1630 aa18.78■□□□□ 0.6
NIPA2P4-201ENST00000523928 ZCCHC6Q5VYS8 1495 aaKnown RBP18.78■□□□□ 0.6
NIPA2P4-201ENST00000523928 ZNF219Q9P2Y4 722 aaPredicted RBP18.77■□□□□ 0.6
NIPA2P4-201ENST00000523928 EIF4G1Q04637 1599 aaKnown RBP18.74■□□□□ 0.59
NIPA2P4-201ENST00000523928 DCAF1Q9Y4B6 1507 aa18.74■□□□□ 0.59
NIPA2P4-201ENST00000523928 SAMD1Q6SPF0 538 aaPredicted RBP18.74■□□□□ 0.59
NIPA2P4-201ENST00000523928 ABCB7O75027 752 aa18.68■□□□□ 0.58
NIPA2P4-201ENST00000523928 MYCNP04198 464 aaPredicted RBP18.56■□□□□ 0.56
NIPA2P4-201ENST00000523928 SLC4A1APQ9BWU0 796 aaKnown RBP18.49■□□□□ 0.55
NIPA2P4-201ENST00000523928 DNAJC5Q9H3Z4 198 aa18.43■□□□□ 0.54
NIPA2P4-201ENST00000523928 POTEHQ6S545 545 aa18.35■□□□□ 0.53
NIPA2P4-201ENST00000523928 FOXD4L1Q9NU39 408 aa18.33■□□□□ 0.53
NIPA2P4-201ENST00000523928 POLA2Q14181 598 aa18.28■□□□□ 0.52
NIPA2P4-201ENST00000523928 RBM42Q9BTD8 480 aaKnown RBP18.18■□□□□ 0.5
NIPA2P4-201ENST00000523928 CUX2O14529 1486 aa18.14■□□□□ 0.49
NIPA2P4-201ENST00000523928 ATF5Q9Y2D1 282 aaPredicted RBP18.14■□□□□ 0.49
NIPA2P4-201ENST00000523928 ERCC6Q03468 1493 aa18.1■□□□□ 0.49
NIPA2P4-201ENST00000523928 ZBTB22O15209 634 aa18.03■□□□□ 0.48
NIPA2P4-201ENST00000523928 NCAPD3P42695 1498 aa17.97■□□□□ 0.47
NIPA2P4-201ENST00000523928 ZBTB12Q9Y330 459 aaPredicted RBP17.92■□□□□ 0.46
NIPA2P4-201ENST00000523928 ATAD2BQ9ULI0 1458 aa17.89■□□□□ 0.45
NIPA2P4-201ENST00000523928 HMGXB3Q12766 1538 aa17.88■□□□□ 0.45
NIPA2P4-201ENST00000523928 SMARCA2P51531 1590 aa17.87■□□□□ 0.45
NIPA2P4-201ENST00000523928 SMARCA4P51532 1647 aa17.85■□□□□ 0.45
NIPA2P4-201ENST00000523928 NESP48681 1621 aa17.84■□□□□ 0.45
NIPA2P4-201ENST00000523928 CHRDL2Q6WN34 429 aa17.81■□□□□ 0.44
NIPA2P4-201ENST00000523928 THOC2Q8NI27 1593 aaKnown RBP17.78■□□□□ 0.44
NIPA2P4-201ENST00000523928 ATXN8OSP0DMR3 200 aa17.78■□□□□ 0.44
NIPA2P4-201ENST00000523928 BAZ1BQ9UIG0 1483 aaKnown RBP17.75■□□□□ 0.43
NIPA2P4-201ENST00000523928 AKT1S1Q96B36 256 aa17.74■□□□□ 0.43
NIPA2P4-201ENST00000523928 OSCARQ8IYS5 282 aa17.71■□□□□ 0.42
NIPA2P4-201ENST00000523928 BAZ1AQ9NRL2 1556 aaPredicted RBP17.69■□□□□ 0.42
NIPA2P4-201ENST00000523928 LAMC3Q9Y6N6 1575 aa17.68■□□□□ 0.42
NIPA2P4-201ENST00000523928 KIF21AQ7Z4S6 1674 aa17.68■□□□□ 0.42
NIPA2P4-201ENST00000523928 PEG3Q9GZU2 1588 aa17.64■□□□□ 0.41
NIPA2P4-201ENST00000523928 REM2Q8IYK8 340 aaPredicted RBP17.58■□□□□ 0.4
NIPA2P4-201ENST00000523928 TRIM41Q8WV44 630 aa17.56■□□□□ 0.4
NIPA2P4-201ENST00000523928 PDS5BQ9NTI5 1447 aa17.56■□□□□ 0.4
NIPA2P4-201ENST00000523928 MROH2BQ7Z745 1585 aa17.51■□□□□ 0.39
NIPA2P4-201ENST00000523928 MRC2Q9UBG0 1479 aa17.46■□□□□ 0.39
NIPA2P4-201ENST00000523928 FBLN2P98095 1184 aa17.44■□□□□ 0.38
NIPA2P4-201ENST00000523928 WDR62O43379 1518 aa17.43■□□□□ 0.38
NIPA2P4-201ENST00000523928 CADPSQ9ULU8 1353 aa17.41■□□□□ 0.38
NIPA2P4-201ENST00000523928 PITPNM1O00562 1244 aa17.39■□□□□ 0.37
NIPA2P4-201ENST00000523928 PIP4P2Q8N4L2 257 aa17.37■□□□□ 0.37
NIPA2P4-201ENST00000523928 SPDYE2BA6NHP3 402 aa17.36■□□□□ 0.37
NIPA2P4-201ENST00000523928 SPDYE6P0CI01 402 aa17.36■□□□□ 0.37
NIPA2P4-201ENST00000523928 SPDYE2Q495Y8 402 aa17.36■□□□□ 0.37
NIPA2P4-201ENST00000523928 CEP164Q9UPV0 1460 aa17.33■□□□□ 0.37
NIPA2P4-201ENST00000523928 WIZO95785 1651 aa17.32■□□□□ 0.36
NIPA2P4-201ENST00000523928 MKRN4PQ13434 485 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms