RNA–Protein interactions for RNA: ENST00000523675.1

PTK2-248, Transcript of protein tyrosine kinase 2, humanhuman

TSL 3

Gene PTK2, Length 650 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-248ENST00000523675 AEBP2Q6ZN18 517 aaPredicted RBP27.01■■□□□ 1.91
PTK2-248ENST00000523675 CHIC1Q5VXU3 224 aa25.76■■□□□ 1.71
PTK2-248ENST00000523675 SENP3Q9H4L4 574 aaPredicted RBP22.98■■□□□ 1.27
PTK2-248ENST00000523675 PHF23Q9BUL5 403 aaPredicted RBP22.72■■□□□ 1.23
PTK2-248ENST00000523675 FOXD1Q16676 465 aa21.44■■□□□ 1.02
PTK2-248ENST00000523675 NISCHQ9Y2I1 1504 aa21.04■□□□□ 0.96
PTK2-248ENST00000523675 PLPPR3Q6T4P5 718 aa20.63■□□□□ 0.89
PTK2-248ENST00000523675 PPP6R1Q9UPN7 881 aa20.16■□□□□ 0.82
PTK2-248ENST00000523675 ADRA2BP18089 450 aa20.07■□□□□ 0.8
PTK2-248ENST00000523675 PIAS4Q8N2W9 510 aaPredicted RBP20.03■□□□□ 0.8
PTK2-248ENST00000523675 MSH5O43196 834 aa19.99■□□□□ 0.79
PTK2-248ENST00000523675 POTEDQ86YR6 584 aa19.31■□□□□ 0.68
PTK2-248ENST00000523675 CCDC180Q9P1Z9 1646 aa18.88■□□□□ 0.61
PTK2-248ENST00000523675 ABCC9O60706 1549 aa18.7■□□□□ 0.58
PTK2-248ENST00000523675 MAPK8IP2Q13387 824 aaPredicted RBP18.41■□□□□ 0.54
PTK2-248ENST00000523675 SCAF1Q9H7N4 1312 aaKnown RBP18.33■□□□□ 0.53
PTK2-248ENST00000523675 DMRT2Q9Y5R5 561 aa18.27■□□□□ 0.52
PTK2-248ENST00000523675 PPP4R3CPQ6ZMV5 832 aa18.11■□□□□ 0.49
PTK2-248ENST00000523675 RB1CC1Q8TDY2 1594 aa17.93■□□□□ 0.46
PTK2-248ENST00000523675 NACADO15069 1562 aa17.85■□□□□ 0.45
PTK2-248ENST00000523675 CNKSR2Q8WXI2 1034 aa17.73■□□□□ 0.43
PTK2-248ENST00000523675 MYO15BQ96JP2 1530 aa17.68■□□□□ 0.42
PTK2-248ENST00000523675 HOXD11P31277 338 aaPredicted RBP17.66■□□□□ 0.42
PTK2-248ENST00000523675 DCAF8L2P0C7V8 631 aa17.64■□□□□ 0.41
PTK2-248ENST00000523675 RNF216Q9NWF9 866 aaPredicted RBP17.55■□□□□ 0.4
PTK2-248ENST00000523675 DNAJC5BQ9UF47 199 aa17.51■□□□□ 0.39
PTK2-248ENST00000523675 UNC13AQ9UPW8 1703 aa17.47■□□□□ 0.39
PTK2-248ENST00000523675 DCAF1Q9Y4B6 1507 aa17.46■□□□□ 0.39
PTK2-248ENST00000523675 DCAF8L1A6NGE4 600 aa17.45■□□□□ 0.38
PTK2-248ENST00000523675 ZCCHC6Q5VYS8 1495 aaKnown RBP17.43■□□□□ 0.38
PTK2-248ENST00000523675 PABPN1Q86U42 306 aaKnown RBP eCLIP17.42■□□□□ 0.38
PTK2-248ENST00000523675 NCBP3Q53F19 620 aaKnown RBP17.41■□□□□ 0.38
PTK2-248ENST00000523675 BICRAQ9NZM4 1560 aa17.36■□□□□ 0.37
PTK2-248ENST00000523675 SHROOM4Q9ULL8 1493 aa17.26■□□□□ 0.35
PTK2-248ENST00000523675 NPM3O75607 178 aaKnown RBP17.21■□□□□ 0.35
PTK2-248ENST00000523675 SCRIBQ14160 1630 aa17.09■□□□□ 0.33
PTK2-248ENST00000523675 RNF39Q9H2S5 420 aa17.08■□□□□ 0.32
PTK2-248ENST00000523675 CACNB1Q02641 598 aaPredicted RBP17.04■□□□□ 0.32
PTK2-248ENST00000523675 KCNA4P22459 653 aa16.99■□□□□ 0.31
PTK2-248ENST00000523675 CC2D2AQ9P2K1 1620 aa16.95■□□□□ 0.3
PTK2-248ENST00000523675 EIF4G1Q04637 1599 aaKnown RBP16.94■□□□□ 0.3
PTK2-248ENST00000523675 CECR2Q9BXF3 1484 aa16.9■□□□□ 0.3
PTK2-248ENST00000523675 C1QBPQ07021 282 aaKnown RBP16.83■□□□□ 0.28
PTK2-248ENST00000523675 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.77■□□□□ 0.28
PTK2-248ENST00000523675 NCAPD3P42695 1498 aa16.48■□□□□ 0.23
PTK2-248ENST00000523675 U3KPZ7 1027 aaPredicted RBP16.48■□□□□ 0.23
PTK2-248ENST00000523675 SLC4A2P04920 1241 aa16.42■□□□□ 0.22
PTK2-248ENST00000523675 ATAD2BQ9ULI0 1458 aa16.39■□□□□ 0.21
PTK2-248ENST00000523675 SMARCA2P51531 1590 aa16.38■□□□□ 0.21
PTK2-248ENST00000523675 SMARCA4P51532 1647 aa16.37■□□□□ 0.21
PTK2-248ENST00000523675 HMGXB3Q12766 1538 aa16.35■□□□□ 0.21
PTK2-248ENST00000523675 BAZ1AQ9NRL2 1556 aaPredicted RBP16.34■□□□□ 0.21
PTK2-248ENST00000523675 PEG3Q9GZU2 1588 aa16.28■□□□□ 0.2
PTK2-248ENST00000523675 BAZ1BQ9UIG0 1483 aaKnown RBP16.22■□□□□ 0.19
PTK2-248ENST00000523675 CUX2O14529 1486 aa16.21■□□□□ 0.19
PTK2-248ENST00000523675 SPINK5Q9NQ38 1064 aaPredicted RBP16.19■□□□□ 0.18
PTK2-248ENST00000523675 ERCC6Q03468 1493 aa16.18■□□□□ 0.18
PTK2-248ENST00000523675 MROH2BQ7Z745 1585 aa16.15■□□□□ 0.18
PTK2-248ENST00000523675 CAPN15O75808 1086 aa16.13■□□□□ 0.17
PTK2-248ENST00000523675 DNAJC5Q9H3Z4 198 aa16.12■□□□□ 0.17
PTK2-248ENST00000523675 LAMC3Q9Y6N6 1575 aa16.09■□□□□ 0.17
PTK2-248ENST00000523675 NESP48681 1621 aa16.08■□□□□ 0.16
PTK2-248ENST00000523675 DSG3P32926 999 aa16.04■□□□□ 0.16
PTK2-248ENST00000523675 SLC4A1APQ9BWU0 796 aaKnown RBP16.03■□□□□ 0.16
PTK2-248ENST00000523675 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.01■□□□□ 0.15
PTK2-248ENST00000523675 HNRNPUL2Q1KMD3 747 aaKnown RBP16.01■□□□□ 0.15
PTK2-248ENST00000523675 PDS5BQ9NTI5 1447 aa16■□□□□ 0.15
PTK2-248ENST00000523675 APLP2Q06481 763 aa15.97■□□□□ 0.15
PTK2-248ENST00000523675 CADPSQ9ULU8 1353 aa15.96■□□□□ 0.15
PTK2-248ENST00000523675 THOC2Q8NI27 1593 aaKnown RBP15.95■□□□□ 0.14
PTK2-248ENST00000523675 WIZO95785 1651 aa15.95■□□□□ 0.14
PTK2-248ENST00000523675 SAMD1Q6SPF0 538 aaPredicted RBP15.93■□□□□ 0.14
PTK2-248ENST00000523675 TRHP20396 242 aaPredicted RBP15.9■□□□□ 0.14
PTK2-248ENST00000523675 KIF21AQ7Z4S6 1674 aa15.89■□□□□ 0.13
PTK2-248ENST00000523675 MYCNP04198 464 aaPredicted RBP15.89■□□□□ 0.13
PTK2-248ENST00000523675 ZNF219Q9P2Y4 722 aaPredicted RBP15.88■□□□□ 0.13
PTK2-248ENST00000523675 RSF1Q96T23 1441 aaPredicted RBP15.87■□□□□ 0.13
PTK2-248ENST00000523675 MRC2Q9UBG0 1479 aa15.81■□□□□ 0.12
PTK2-248ENST00000523675 TOP2AP11388 1531 aaKnown RBP15.8■□□□□ 0.12
PTK2-248ENST00000523675 FOXD4L1Q9NU39 408 aa15.8■□□□□ 0.12
PTK2-248ENST00000523675 CFTRP13569 1480 aa15.79■□□□□ 0.12
PTK2-248ENST00000523675 WDR62O43379 1518 aa15.78■□□□□ 0.12
PTK2-248ENST00000523675 ABCB7O75027 752 aa15.77■□□□□ 0.12
PTK2-248ENST00000523675 CEP164Q9UPV0 1460 aa15.76■□□□□ 0.11
PTK2-248ENST00000523675 FANCD2Q9BXW9 1451 aa15.74■□□□□ 0.11
PTK2-248ENST00000523675 ZBTB22O15209 634 aa15.64■□□□□ 0.09
PTK2-248ENST00000523675 PRDM2Q13029 1718 aa15.63■□□□□ 0.09
PTK2-248ENST00000523675 CCDC88BA6NC98 1476 aa15.61■□□□□ 0.09
PTK2-248ENST00000523675 URB2Q14146 1524 aaKnown RBP15.58■□□□□ 0.09
PTK2-248ENST00000523675 ATF5Q9Y2D1 282 aaPredicted RBP15.55■□□□□ 0.08
PTK2-248ENST00000523675 POLA2Q14181 598 aa15.53■□□□□ 0.08
PTK2-248ENST00000523675 ABCC8Q09428 1581 aa15.52■□□□□ 0.07
PTK2-248ENST00000523675 OSCARQ8IYS5 282 aa15.48■□□□□ 0.07
PTK2-248ENST00000523675 IFT140Q96RY7 1462 aa15.46■□□□□ 0.07
PTK2-248ENST00000523675 TOPBP1Q92547 1522 aa15.44■□□□□ 0.06
PTK2-248ENST00000523675 DNMBPQ6XZF7 1577 aa15.41■□□□□ 0.06
PTK2-248ENST00000523675 ZNF608Q9ULD9 1512 aaPredicted RBP15.36■□□□□ 0.05
PTK2-248ENST00000523675 TRIM41Q8WV44 630 aa15.32■□□□□ 0.04
PTK2-248ENST00000523675 TARBP1Q13395 1621 aaKnown RBP15.32■□□□□ 0.04
PTK2-248ENST00000523675 ATXN8OSP0DMR3 200 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms