RNA–Protein interactions for RNA: ENST00000523675.1

PTK2-248, Transcript of protein tyrosine kinase 2, humanhuman

TSL 3

Gene PTK2, Length 650 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-248ENST00000523675 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.31□□□□□ -1.247e-30■■■■■ 44.4
PTK2-248ENST00000523675 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.5□□□□□ -0.419e-22■□□□□ 9.1
PTK2-248ENST00000523675 PTBP1P26599 531 aaKnown RBP eCLIP6.34□□□□□ -1.392e-13■■■■□ 26.4
PTK2-248ENST00000523675 PCBP2Q15366 365 aaKnown RBP eCLIP7.79□□□□□ -1.165e-10■■■■□ 19.8
PTK2-248ENST00000523675 YBX3P16989 372 aaKnown RBP eCLIP11.43□□□□□ -0.584e-9■■□□□ 11.5
PTK2-248ENST00000523675 SLBPQ14493 270 aaKnown RBP eCLIP7.85□□□□□ -1.153e-8■■■■■ 184.8
PTK2-248ENST00000523675 HNRNPLP14866 589 aaKnown RBP eCLIP8.87□□□□□ -0.991e-7■□□□□ 8.4
PTK2-248ENST00000523675 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.18□□□□□ -1.11e-7■■■■■ 35.3
PTK2-248ENST00000523675 SRSF9Q13242 221 aaKnown RBP eCLIP5.25□□□□□ -1.572e-7■■□□□ 13.7
PTK2-248ENST00000523675 SFPQP23246 707 aaKnown RBP eCLIP9.46□□□□□ -0.95e-7■■□□□ 14.5
PTK2-248ENST00000523675 MATR3P43243 847 aaKnown RBP eCLIP9.16□□□□□ -0.945e-7■■■■□ 23.7
PTK2-248ENST00000523675 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.39□□□□□ -1.077e-7■□□□□ 8.5
PTK2-248ENST00000523675 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.63□□□□□ -1.351e-6■■■■□ 19.3
PTK2-248ENST00000523675 KHSRPQ92945 711 aaKnown RBP eCLIP11.79□□□□□ -0.522e-6■■□□□ 13.7
PTK2-248ENST00000523675 HNRNPKP61978 463 aaKnown RBP eCLIP8.58□□□□□ -1.043e-6■■■□□ 15.2
PTK2-248ENST00000523675 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.88□□□□□ -0.513e-6■■■□□ 18.6
PTK2-248ENST00000523675 HNRNPMP52272 730 aaKnown RBP eCLIP13.49□□□□□ -0.253e-6■■■■□ 19.4
PTK2-248ENST00000523675 FMR1Q06787 632 aaKnown RBP eCLIP10.77□□□□□ -0.698e-6■■□□□ 11.8
PTK2-248ENST00000523675 HLTFQ14527 1009 aaKnown RBP eCLIP8.44□□□□□ -1.068e-6■■■■□ 21.3
PTK2-248ENST00000523675 PUS1Q9Y606 427 aaKnown RBP eCLIP6.18□□□□□ -1.421e-5■■■■■ 49.7
Retrieved 20 of 20 RNA–protein pairs in 6.4 ms