RNA–Protein interactions for RNA: ENST00000522126.5

FCHSD1-206, Transcript of FCH and double SH3 domains 1, humanhuman

TSL 2

Gene FCHSD1, Length 2,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCHSD1-206ENST00000522126 NISCHQ9Y2I1 1504 aa35.79■■■■□ 3.32
FCHSD1-206ENST00000522126 CCDC180Q9P1Z9 1646 aa30.76■■■□□ 2.51
FCHSD1-206ENST00000522126 DCAF8L2P0C7V8 631 aa30.2■■■□□ 2.43
FCHSD1-206ENST00000522126 ZCCHC6Q5VYS8 1495 aaKnown RBP30.06■■■□□ 2.4
FCHSD1-206ENST00000522126 SHROOM4Q9ULL8 1493 aa30■■■□□ 2.39
FCHSD1-206ENST00000522126 ABCC9O60706 1549 aa29.5■■■□□ 2.31
FCHSD1-206ENST00000522126 DCAF1Q9Y4B6 1507 aa29.3■■■□□ 2.28
FCHSD1-206ENST00000522126 SUPT5HO00267 1087 aaKnown RBP29.01■■■□□ 2.23
FCHSD1-206ENST00000522126 SCRIBQ14160 1630 aa28.8■■■□□ 2.2
FCHSD1-206ENST00000522126 MYO15BQ96JP2 1530 aa28.8■■■□□ 2.2
FCHSD1-206ENST00000522126 NACADO15069 1562 aa28.73■■■□□ 2.19
FCHSD1-206ENST00000522126 RB1CC1Q8TDY2 1594 aa28.5■■■□□ 2.15
FCHSD1-206ENST00000522126 PELP1Q8IZL8 1130 aaKnown RBP28.2■■■□□ 2.1
FCHSD1-206ENST00000522126 PABPN1Q86U42 306 aaKnown RBP eCLIP28.09■■■□□ 2.09
FCHSD1-206ENST00000522126 CECR2Q9BXF3 1484 aa28.03■■■□□ 2.08
FCHSD1-206ENST00000522126 RSF1Q96T23 1441 aaPredicted RBP28■■■□□ 2.07
FCHSD1-206ENST00000522126 UNC13AQ9UPW8 1703 aa27.9■■■□□ 2.06
FCHSD1-206ENST00000522126 MROH2BQ7Z745 1585 aa27.8■■■□□ 2.04
FCHSD1-206ENST00000522126 BICRAQ9NZM4 1560 aa27.71■■■□□ 2.03
FCHSD1-206ENST00000522126 CHIC1Q5VXU3 224 aa27.65■■■□□ 2.02
FCHSD1-206ENST00000522126 WIZO95785 1651 aa27.57■■■□□ 2
FCHSD1-206ENST00000522126 BAZ1AQ9NRL2 1556 aaPredicted RBP27.55■■■□□ 2
FCHSD1-206ENST00000522126 HRCP23327 699 aa27.53■■■□□ 2
FCHSD1-206ENST00000522126 MYT1Q01538 1121 aa27.43■■□□□ 1.98
FCHSD1-206ENST00000522126 SMARCA4P51532 1647 aa27.42■■□□□ 1.98
FCHSD1-206ENST00000522126 TOP2AP11388 1531 aaKnown RBP27.12■■□□□ 1.93
FCHSD1-206ENST00000522126 TRIM41Q8WV44 630 aa27.05■■□□□ 1.92
FCHSD1-206ENST00000522126 CCDC88BA6NC98 1476 aa27.04■■□□□ 1.92
FCHSD1-206ENST00000522126 ATAD2BQ9ULI0 1458 aa27.01■■□□□ 1.91
FCHSD1-206ENST00000522126 SMARCA2P51531 1590 aa26.94■■□□□ 1.9
FCHSD1-206ENST00000522126 PPARGC1BQ86YN6 1023 aaKnown RBP26.9■■□□□ 1.9
FCHSD1-206ENST00000522126 BAZ1BQ9UIG0 1483 aaKnown RBP26.9■■□□□ 1.9
FCHSD1-206ENST00000522126 EIF4G1Q04637 1599 aaKnown RBP26.89■■□□□ 1.9
FCHSD1-206ENST00000522126 PEG3Q9GZU2 1588 aa26.89■■□□□ 1.9
FCHSD1-206ENST00000522126 FAM9AQ8IZU1 332 aaPredicted RBP26.87■■□□□ 1.89
FCHSD1-206ENST00000522126 LOC105371045A0A1W2PR82 267 aa26.86■■□□□ 1.89
FCHSD1-206ENST00000522126 EHMT2Q96KQ7 1210 aa26.72■■□□□ 1.87
FCHSD1-206ENST00000522126 SCAF1Q9H7N4 1312 aaKnown RBP26.68■■□□□ 1.86
FCHSD1-206ENST00000522126 ABCC8Q09428 1581 aa26.67■■□□□ 1.86
FCHSD1-206ENST00000522126 NCAPD3P42695 1498 aa26.63■■□□□ 1.85
FCHSD1-206ENST00000522126 HMGXB3Q12766 1538 aa26.49■■□□□ 1.83
FCHSD1-206ENST00000522126 CC2D2AQ9P2K1 1620 aa26.47■■□□□ 1.83
FCHSD1-206ENST00000522126 PCGF6Q9BYE7 350 aa26.37■■□□□ 1.81
FCHSD1-206ENST00000522126 WRNQ14191 1432 aaPredicted RBP eCLIP26.35■■□□□ 1.81
FCHSD1-206ENST00000522126 SOGA1O94964 1423 aa26.27■■□□□ 1.8
FCHSD1-206ENST00000522126 DNAJC5BQ9UF47 199 aa26.23■■□□□ 1.79
FCHSD1-206ENST00000522126 SYNJ1O43426 1573 aa26.19■■□□□ 1.78
FCHSD1-206ENST00000522126 RUSC2Q8N2Y8 1516 aa26.18■■□□□ 1.78
FCHSD1-206ENST00000522126 CFTRP13569 1480 aa26.16■■□□□ 1.78
FCHSD1-206ENST00000522126 CADPSQ9ULU8 1353 aa26.1■■□□□ 1.77
FCHSD1-206ENST00000522126 TTBK1Q5TCY1 1321 aaPredicted RBP26.09■■□□□ 1.77
FCHSD1-206ENST00000522126 CSRNP3Q8WYN3 585 aa26.06■■□□□ 1.76
FCHSD1-206ENST00000522126 NESP48681 1621 aa25.97■■□□□ 1.75
FCHSD1-206ENST00000522126 UBTFP17480 764 aaKnown RBP25.94■■□□□ 1.74
FCHSD1-206ENST00000522126 CUX1P39880 1505 aa25.93■■□□□ 1.74
FCHSD1-206ENST00000522126 TOP2BQ02880 1626 aa25.92■■□□□ 1.74
FCHSD1-206ENST00000522126 EEA1Q15075 1411 aa25.88■■□□□ 1.73
FCHSD1-206ENST00000522126 FANCD2Q9BXW9 1451 aa25.83■■□□□ 1.73
FCHSD1-206ENST00000522126 BIVM-ERCC5R4GMW8 1640 aa25.8■■□□□ 1.72
FCHSD1-206ENST00000522126 RANGAP1P46060 587 aaPredicted RBP25.77■■□□□ 1.72
FCHSD1-206ENST00000522126 PRDM2Q13029 1718 aa25.7■■□□□ 1.7
FCHSD1-206ENST00000522126 GOLGA3Q08378 1498 aa25.7■■□□□ 1.7
FCHSD1-206ENST00000522126 TNIKQ9UKE5 1360 aa25.67■■□□□ 1.7
FCHSD1-206ENST00000522126 CEP162Q5TB80 1403 aa25.67■■□□□ 1.7
FCHSD1-206ENST00000522126 ACIN1Q9UKV3 1341 aaKnown RBP25.65■■□□□ 1.7
FCHSD1-206ENST00000522126 CEP164Q9UPV0 1460 aa25.65■■□□□ 1.7
FCHSD1-206ENST00000522126 RAPGEF2Q9Y4G8 1499 aa25.65■■□□□ 1.7
FCHSD1-206ENST00000522126 FGD5Q6ZNL6 1462 aa25.65■■□□□ 1.7
FCHSD1-206ENST00000522126 KIF27Q86VH2 1401 aa25.63■■□□□ 1.69
FCHSD1-206ENST00000522126 CUX2O14529 1486 aa25.6■■□□□ 1.69
FCHSD1-206ENST00000522126 LAMC3Q9Y6N6 1575 aa25.6■■□□□ 1.69
FCHSD1-206ENST00000522126 BCL11AQ9H165 835 aa25.56■■□□□ 1.68
FCHSD1-206ENST00000522126 PDS5BQ9NTI5 1447 aa25.56■■□□□ 1.68
FCHSD1-206ENST00000522126 TRIM26Q12899 539 aaPredicted RBP25.55■■□□□ 1.68
FCHSD1-206ENST00000522126 RAD54L2Q9Y4B4 1467 aa25.55■■□□□ 1.68
FCHSD1-206ENST00000522126 TOPBP1Q92547 1522 aa25.54■■□□□ 1.68
FCHSD1-206ENST00000522126 NEUROD1Q13562 356 aa25.53■■□□□ 1.68
FCHSD1-206ENST00000522126 KIF21BO75037 1637 aa25.52■■□□□ 1.68
FCHSD1-206ENST00000522126 GTF3C3Q9Y5Q9 886 aa25.49■■□□□ 1.67
FCHSD1-206ENST00000522126 URB2Q14146 1524 aaKnown RBP25.49■■□□□ 1.67
FCHSD1-206ENST00000522126 DNMBPQ6XZF7 1577 aa25.48■■□□□ 1.67
FCHSD1-206ENST00000522126 POLA1P09884 1462 aaPredicted RBP25.47■■□□□ 1.67
FCHSD1-206ENST00000522126 PRXQ9BXM0 1461 aa25.46■■□□□ 1.67
FCHSD1-206ENST00000522126 IGF1RP08069 1367 aa25.45■■□□□ 1.66
FCHSD1-206ENST00000522126 PRKCSHP14314 528 aaPredicted RBP25.44■■□□□ 1.66
FCHSD1-206ENST00000522126 CLIP1P30622 1438 aa25.42■■□□□ 1.66
FCHSD1-206ENST00000522126 KIF21AQ7Z4S6 1674 aa25.4■■□□□ 1.66
FCHSD1-206ENST00000522126 ZEB1P37275 1124 aaPredicted RBP25.39■■□□□ 1.66
FCHSD1-206ENST00000522126 TDRD9Q8NDG6 1382 aaKnown RBP25.35■■□□□ 1.65
FCHSD1-206ENST00000522126 CARMIL1Q5VZK9 1371 aa25.34■■□□□ 1.65
FCHSD1-206ENST00000522126 ERICH3Q5RHP9 1530 aa25.3■■□□□ 1.64
FCHSD1-206ENST00000522126 CENPBP07199 599 aaPredicted RBP25.29■■□□□ 1.64
FCHSD1-206ENST00000522126 ABCA10Q8WWZ4 1543 aa25.29■■□□□ 1.64
FCHSD1-206ENST00000522126 ERCC6Q03468 1493 aa25.21■■□□□ 1.63
FCHSD1-206ENST00000522126 MRC2Q9UBG0 1479 aa25.19■■□□□ 1.62
FCHSD1-206ENST00000522126 VPS8Q8N3P4 1428 aa25.14■■□□□ 1.61
FCHSD1-206ENST00000522126 APLP2Q06481 763 aa25.13■■□□□ 1.61
FCHSD1-206ENST00000522126 P3H3Q8IVL6 736 aa25.12■■□□□ 1.61
FCHSD1-206ENST00000522126 GAPVD1Q14C86 1478 aa25.12■■□□□ 1.61
FCHSD1-206ENST00000522126 AQRO60306 1485 aaKnown RBP eCLIP25.1■■□□□ 1.611e-6■■■■□ 24.9
Retrieved 100 of 20,778 RNA–protein pairs in 484.1 ms