RNA–Protein interactions for RNA: ENST00000521529.5

H2AFV-208, Transcript of H2A histone family member V, humanhuman

TSL 5 BASIC

Gene H2AFV, Length 439 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-208ENST00000521529 AEBP2Q6ZN18 517 aaPredicted RBP26.25■■□□□ 1.79
H2AFV-208ENST00000521529 CHIC1Q5VXU3 224 aa25.18■■□□□ 1.62
H2AFV-208ENST00000521529 SENP3Q9H4L4 574 aaPredicted RBP22.29■■□□□ 1.16
H2AFV-208ENST00000521529 PHF23Q9BUL5 403 aaPredicted RBP22.13■■□□□ 1.13
H2AFV-208ENST00000521529 FOXD1Q16676 465 aa20.77■□□□□ 0.92
H2AFV-208ENST00000521529 PLPPR3Q6T4P5 718 aa20.22■□□□□ 0.83
H2AFV-208ENST00000521529 PPP6R1Q9UPN7 881 aa19.66■□□□□ 0.74
H2AFV-208ENST00000521529 ADRA2BP18089 450 aa19.59■□□□□ 0.73
H2AFV-208ENST00000521529 PIAS4Q8N2W9 510 aaPredicted RBP19.44■□□□□ 0.7
H2AFV-208ENST00000521529 MSH5O43196 834 aa19.29■□□□□ 0.68
H2AFV-208ENST00000521529 POTEDQ86YR6 584 aa18.37■□□□□ 0.53
H2AFV-208ENST00000521529 MAPK8IP2Q13387 824 aaPredicted RBP17.91■□□□□ 0.46
H2AFV-208ENST00000521529 SCAF1Q9H7N4 1312 aaKnown RBP17.87■□□□□ 0.45
H2AFV-208ENST00000521529 PPP4R3CPQ6ZMV5 832 aa17.77■□□□□ 0.44
H2AFV-208ENST00000521529 DMRT2Q9Y5R5 561 aa17.74■□□□□ 0.43
H2AFV-208ENST00000521529 CNKSR2Q8WXI2 1034 aa17.37■□□□□ 0.37
H2AFV-208ENST00000521529 HOXD11P31277 338 aaPredicted RBP17.22■□□□□ 0.35
H2AFV-208ENST00000521529 RNF216Q9NWF9 866 aaPredicted RBP17.15■□□□□ 0.34
H2AFV-208ENST00000521529 NCBP3Q53F19 620 aaKnown RBP17.13■□□□□ 0.33
H2AFV-208ENST00000521529 NPM3O75607 178 aaKnown RBP16.94■□□□□ 0.3
H2AFV-208ENST00000521529 DCAF8L1A6NGE4 600 aa16.92■□□□□ 0.3
H2AFV-208ENST00000521529 KCNA4P22459 653 aa16.87■□□□□ 0.29
H2AFV-208ENST00000521529 DNAJC5BQ9UF47 199 aa16.57■□□□□ 0.24
H2AFV-208ENST00000521529 RNF39Q9H2S5 420 aa16.52■□□□□ 0.24
H2AFV-208ENST00000521529 CACNB1Q02641 598 aaPredicted RBP16.36■□□□□ 0.21
H2AFV-208ENST00000521529 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.34■□□□□ 0.213e-6■□□□□ 11.3
H2AFV-208ENST00000521529 C1QBPQ07021 282 aaKnown RBP16.27■□□□□ 0.2
H2AFV-208ENST00000521529 SLC4A2P04920 1241 aa16.13■□□□□ 0.17
H2AFV-208ENST00000521529 U3KPZ7 1027 aaPredicted RBP16.09■□□□□ 0.17
H2AFV-208ENST00000521529 SLC4A1APQ9BWU0 796 aaKnown RBP15.95■□□□□ 0.14
H2AFV-208ENST00000521529 SPINK5Q9NQ38 1064 aaPredicted RBP15.76■□□□□ 0.11
H2AFV-208ENST00000521529 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.67■□□□□ 0.1
H2AFV-208ENST00000521529 CAPN15O75808 1086 aa15.67■□□□□ 0.1
H2AFV-208ENST00000521529 HNRNPUL2Q1KMD3 747 aaKnown RBP15.67■□□□□ 0.1
H2AFV-208ENST00000521529 MYCNP04198 464 aaPredicted RBP15.64■□□□□ 0.09
H2AFV-208ENST00000521529 FOXD4L1Q9NU39 408 aa15.64■□□□□ 0.09
H2AFV-208ENST00000521529 SAMD1Q6SPF0 538 aaPredicted RBP15.6■□□□□ 0.09
H2AFV-208ENST00000521529 APLP2Q06481 763 aa15.59■□□□□ 0.09
H2AFV-208ENST00000521529 ZBTB22O15209 634 aa15.56■□□□□ 0.08
H2AFV-208ENST00000521529 DSG3P32926 999 aa15.56■□□□□ 0.08
H2AFV-208ENST00000521529 TRHP20396 242 aaPredicted RBP15.49■□□□□ 0.07
H2AFV-208ENST00000521529 ZNF219Q9P2Y4 722 aaPredicted RBP15.49■□□□□ 0.07
H2AFV-208ENST00000521529 ABCB7O75027 752 aa15.35■□□□□ 0.05
H2AFV-208ENST00000521529 ATF5Q9Y2D1 282 aaPredicted RBP15.3■□□□□ 0.04
H2AFV-208ENST00000521529 POLA2Q14181 598 aa15.16■□□□□ 0.02
H2AFV-208ENST00000521529 ATXN8OSP0DMR3 200 aa15.13■□□□□ 0.01
H2AFV-208ENST00000521529 CSRNP3Q8WYN3 585 aa15.08■□□□□ 0
H2AFV-208ENST00000521529 NISCHQ9Y2I1 1504 aa15.02□□□□□ -0.01
H2AFV-208ENST00000521529 EHMT2Q96KQ7 1210 aa14.98□□□□□ -0.01
H2AFV-208ENST00000521529 ZBTB12Q9Y330 459 aaPredicted RBP14.85□□□□□ -0.03
H2AFV-208ENST00000521529 RBM42Q9BTD8 480 aaKnown RBP14.79□□□□□ -0.04
H2AFV-208ENST00000521529 OSCARQ8IYS5 282 aa14.68□□□□□ -0.06
H2AFV-208ENST00000521529 MKRN4PQ13434 485 aaPredicted RBP14.61□□□□□ -0.07
H2AFV-208ENST00000521529 FBLN2P98095 1184 aa14.6□□□□□ -0.07
H2AFV-208ENST00000521529 AKT1S1Q96B36 256 aa14.54□□□□□ -0.08
H2AFV-208ENST00000521529 SPDYE2BA6NHP3 402 aa14.44□□□□□ -0.1
H2AFV-208ENST00000521529 SPDYE6P0CI01 402 aa14.44□□□□□ -0.1
H2AFV-208ENST00000521529 SPDYE2Q495Y8 402 aa14.44□□□□□ -0.1
H2AFV-208ENST00000521529 POTEHQ6S545 545 aa14.44□□□□□ -0.1
H2AFV-208ENST00000521529 REM2Q8IYK8 340 aaPredicted RBP14.41□□□□□ -0.1
H2AFV-208ENST00000521529 CHRDL2Q6WN34 429 aa14.38□□□□□ -0.11
H2AFV-208ENST00000521529 SSUH2Q9Y2M2 353 aa14.32□□□□□ -0.12
H2AFV-208ENST00000521529 ABCC9O60706 1549 aa14.31□□□□□ -0.12
H2AFV-208ENST00000521529 ZNF692Q9BU19 519 aaPredicted RBP14.3□□□□□ -0.12
H2AFV-208ENST00000521529 PITPNM1O00562 1244 aa14.26□□□□□ -0.13
H2AFV-208ENST00000521529 PIP4P2Q8N4L2 257 aa14.12□□□□□ -0.15
H2AFV-208ENST00000521529 PABPN1Q86U42 306 aaKnown RBP eCLIP14.11□□□□□ -0.15
H2AFV-208ENST00000521529 SPDYE1Q8NFV5 336 aaPredicted RBP14.1□□□□□ -0.15
H2AFV-208ENST00000521529 FXR2P51116 673 aaKnown RBP eCLIP14.09□□□□□ -0.15
H2AFV-208ENST00000521529 CLEC11AQ9Y240 323 aa14.05□□□□□ -0.16
H2AFV-208ENST00000521529 SPDYE4A6NLX3 237 aa14.02□□□□□ -0.17
H2AFV-208ENST00000521529 PRR29P0C7W0 189 aa13.87□□□□□ -0.19
H2AFV-208ENST00000521529 PRKAR2AP13861 404 aaKnown RBP13.87□□□□□ -0.19
H2AFV-208ENST00000521529 DNAJC5Q9H3Z4 198 aa13.84□□□□□ -0.19
H2AFV-208ENST00000521529 CHADLQ6NUI6 762 aa13.8□□□□□ -0.2
H2AFV-208ENST00000521529 PROM2Q8N271 834 aa13.79□□□□□ -0.2
H2AFV-208ENST00000521529 STAG3Q9UJ98 1225 aa13.76□□□□□ -0.21
H2AFV-208ENST00000521529 HAX1O00165 279 aa13.73□□□□□ -0.21
H2AFV-208ENST00000521529 SP7Q8TDD2 431 aaPredicted RBP13.67□□□□□ -0.22
H2AFV-208ENST00000521529 EVX2Q03828 476 aa13.66□□□□□ -0.22
H2AFV-208ENST00000521529 CCDC180Q9P1Z9 1646 aa13.64□□□□□ -0.23
H2AFV-208ENST00000521529 CREBZFQ9NS37 354 aa13.64□□□□□ -0.23
H2AFV-208ENST00000521529 C19orf67A6NJJ6 358 aa13.63□□□□□ -0.23
H2AFV-208ENST00000521529 FKBP8Q14318 412 aa13.61□□□□□ -0.23
H2AFV-208ENST00000521529 FARP1Q9Y4F1 1045 aaPredicted RBP13.61□□□□□ -0.23
H2AFV-208ENST00000521529 MNX1P50219 401 aaPredicted RBP13.48□□□□□ -0.25
H2AFV-208ENST00000521529 CD44P16070 742 aaKnown RBP13.45□□□□□ -0.26
H2AFV-208ENST00000521529 GABBR2O75899 941 aa13.34□□□□□ -0.27
H2AFV-208ENST00000521529 NPM1P06748 294 aaKnown RBP eCLIP13.34□□□□□ -0.27
H2AFV-208ENST00000521529 MIER1Q8N108 512 aa13.31□□□□□ -0.28
H2AFV-208ENST00000521529 RB1CC1Q8TDY2 1594 aa13.29□□□□□ -0.28
H2AFV-208ENST00000521529 ZRANB1Q9UGI0 708 aa13.29□□□□□ -0.28
H2AFV-208ENST00000521529 ZNF579Q8NAF0 562 aaKnown RBP13.28□□□□□ -0.28
H2AFV-208ENST00000521529 PLEKHG5O94827 1062 aa13.24□□□□□ -0.29
H2AFV-208ENST00000521529 PLCD3Q8N3E9 789 aa13.24□□□□□ -0.29
H2AFV-208ENST00000521529 FBXO3Q9UK99 471 aa13.22□□□□□ -0.29
H2AFV-208ENST00000521529 PAK3O75914 559 aaPredicted RBP13.21□□□□□ -0.29
H2AFV-208ENST00000521529 CLCN6P51797 869 aa13.21□□□□□ -0.29
H2AFV-208ENST00000521529 PHF12Q96QT6 1004 aa13.15□□□□□ -0.3
H2AFV-208ENST00000521529 RASEFQ8IZ41 740 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms