RNA–Protein interactions for RNA: ENST00000520672.2

PCDHA2-202, Transcript of protocadherin alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHA2, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2-202ENST00000520672 NISCHQ9Y2I1 1504 aa28.79■■■□□ 2.2
PCDHA2-202ENST00000520672 SHROOM4Q9ULL8 1493 aa24.69■■□□□ 1.54
PCDHA2-202ENST00000520672 DCAF8L2P0C7V8 631 aa24.67■■□□□ 1.54
PCDHA2-202ENST00000520672 CCDC180Q9P1Z9 1646 aa24.47■■□□□ 1.51
PCDHA2-202ENST00000520672 ZCCHC6Q5VYS8 1495 aaKnown RBP24.19■■□□□ 1.46
PCDHA2-202ENST00000520672 SUPT5HO00267 1087 aaKnown RBP24.02■■□□□ 1.44
PCDHA2-202ENST00000520672 ABCC9O60706 1549 aa23.58■■□□□ 1.37
PCDHA2-202ENST00000520672 DCAF1Q9Y4B6 1507 aa23.4■■□□□ 1.34
PCDHA2-202ENST00000520672 PELP1Q8IZL8 1130 aaKnown RBP23.3■■□□□ 1.32
PCDHA2-202ENST00000520672 SCRIBQ14160 1630 aa23.21■■□□□ 1.31
PCDHA2-202ENST00000520672 HRCP23327 699 aa22.93■■□□□ 1.26
PCDHA2-202ENST00000520672 CHIC1Q5VXU3 224 aa22.88■■□□□ 1.25
PCDHA2-202ENST00000520672 NACADO15069 1562 aa22.86■■□□□ 1.25
PCDHA2-202ENST00000520672 MYO15BQ96JP2 1530 aa22.86■■□□□ 1.25
PCDHA2-202ENST00000520672 PPARGC1BQ86YN6 1023 aaKnown RBP22.79■■□□□ 1.24
PCDHA2-202ENST00000520672 RSF1Q96T23 1441 aaPredicted RBP22.69■■□□□ 1.22
PCDHA2-202ENST00000520672 RB1CC1Q8TDY2 1594 aa22.66■■□□□ 1.22
PCDHA2-202ENST00000520672 CECR2Q9BXF3 1484 aa22.65■■□□□ 1.22
PCDHA2-202ENST00000520672 PABPN1Q86U42 306 aaKnown RBP eCLIP22.61■■□□□ 1.21
PCDHA2-202ENST00000520672 MYT1Q01538 1121 aa22.56■■□□□ 1.2
PCDHA2-202ENST00000520672 MROH2BQ7Z745 1585 aa22.45■■□□□ 1.18
PCDHA2-202ENST00000520672 PCGF6Q9BYE7 350 aa22.43■■□□□ 1.18
PCDHA2-202ENST00000520672 LOC105371045A0A1W2PR82 267 aa22.38■■□□□ 1.17
PCDHA2-202ENST00000520672 SCAF1Q9H7N4 1312 aaKnown RBP22.36■■□□□ 1.17
PCDHA2-202ENST00000520672 FAM9AQ8IZU1 332 aaPredicted RBP22.3■■□□□ 1.16
PCDHA2-202ENST00000520672 EHMT2Q96KQ7 1210 aa22.3■■□□□ 1.16
PCDHA2-202ENST00000520672 TRIM41Q8WV44 630 aa22.29■■□□□ 1.16
PCDHA2-202ENST00000520672 WIZO95785 1651 aa22.29■■□□□ 1.16
PCDHA2-202ENST00000520672 UNC13AQ9UPW8 1703 aa22.22■■□□□ 1.15
PCDHA2-202ENST00000520672 BAZ1AQ9NRL2 1556 aaPredicted RBP22.13■■□□□ 1.13
PCDHA2-202ENST00000520672 BICRAQ9NZM4 1560 aa22.03■■□□□ 1.12
PCDHA2-202ENST00000520672 SMARCA4P51532 1647 aa21.99■■□□□ 1.11
PCDHA2-202ENST00000520672 CCDC88BA6NC98 1476 aa21.85■■□□□ 1.09
PCDHA2-202ENST00000520672 TOP2AP11388 1531 aaKnown RBP21.82■■□□□ 1.08
PCDHA2-202ENST00000520672 ABCC8Q09428 1581 aa21.72■■□□□ 1.07
PCDHA2-202ENST00000520672 SMARCA2P51531 1590 aa21.71■■□□□ 1.07
PCDHA2-202ENST00000520672 ATAD2BQ9ULI0 1458 aa21.63■■□□□ 1.05
PCDHA2-202ENST00000520672 TRIM26Q12899 539 aaPredicted RBP21.61■■□□□ 1.05
PCDHA2-202ENST00000520672 BAZ1BQ9UIG0 1483 aaKnown RBP21.6■■□□□ 1.05
PCDHA2-202ENST00000520672 EIF4G1Q04637 1599 aaKnown RBP21.52■■□□□ 1.04
PCDHA2-202ENST00000520672 GTF3C3Q9Y5Q9 886 aa21.47■■□□□ 1.03
PCDHA2-202ENST00000520672 SOGA1O94964 1423 aa21.45■■□□□ 1.03
PCDHA2-202ENST00000520672 NEUROD1Q13562 356 aa21.45■■□□□ 1.02
PCDHA2-202ENST00000520672 PEG3Q9GZU2 1588 aa21.43■■□□□ 1.02
PCDHA2-202ENST00000520672 BCL11AQ9H165 835 aa21.42■■□□□ 1.02
PCDHA2-202ENST00000520672 ACIN1Q9UKV3 1341 aaKnown RBP21.41■■□□□ 1.02
PCDHA2-202ENST00000520672 TTBK1Q5TCY1 1321 aaPredicted RBP21.41■■□□□ 1.02
PCDHA2-202ENST00000520672 UBTFP17480 764 aaKnown RBP21.39■■□□□ 1.01
PCDHA2-202ENST00000520672 RUSC2Q8N2Y8 1516 aa21.38■■□□□ 1.01
PCDHA2-202ENST00000520672 WRNQ14191 1432 aaPredicted RBP eCLIP21.37■■□□□ 1.01
PCDHA2-202ENST00000520672 RANGAP1P46060 587 aaPredicted RBP21.33■■□□□ 1
PCDHA2-202ENST00000520672 CSRNP3Q8WYN3 585 aa21.32■■□□□ 1
PCDHA2-202ENST00000520672 PRKCSHP14314 528 aaPredicted RBP21.32■■□□□ 1
PCDHA2-202ENST00000520672 ZEB1P37275 1124 aaPredicted RBP21.26■□□□□ 0.99
PCDHA2-202ENST00000520672 NCAPD3P42695 1498 aa21.23■□□□□ 0.99
PCDHA2-202ENST00000520672 SYNJ1O43426 1573 aa21.2■□□□□ 0.98
PCDHA2-202ENST00000520672 CENPBP07199 599 aaPredicted RBP21.12■□□□□ 0.97
PCDHA2-202ENST00000520672 HMGXB3Q12766 1538 aa21.08■□□□□ 0.97
PCDHA2-202ENST00000520672 CEP162Q5TB80 1403 aa21.07■□□□□ 0.96
PCDHA2-202ENST00000520672 CC2D2AQ9P2K1 1620 aa21.03■□□□□ 0.96
PCDHA2-202ENST00000520672 EEA1Q15075 1411 aa21.02■□□□□ 0.96
PCDHA2-202ENST00000520672 TNIKQ9UKE5 1360 aa21■□□□□ 0.95
PCDHA2-202ENST00000520672 DNAJC5BQ9UF47 199 aa20.98■□□□□ 0.95
PCDHA2-202ENST00000520672 GOLGA3Q08378 1498 aa20.97■□□□□ 0.95
PCDHA2-202ENST00000520672 CFTRP13569 1480 aa20.94■□□□□ 0.94
PCDHA2-202ENST00000520672 CADPSQ9ULU8 1353 aa20.91■□□□□ 0.94
PCDHA2-202ENST00000520672 RAPGEF2Q9Y4G8 1499 aa20.91■□□□□ 0.94
PCDHA2-202ENST00000520672 CUX1P39880 1505 aa20.89■□□□□ 0.94
PCDHA2-202ENST00000520672 TOP2BQ02880 1626 aa20.89■□□□□ 0.93
PCDHA2-202ENST00000520672 CEP164Q9UPV0 1460 aa20.88■□□□□ 0.93
PCDHA2-202ENST00000520672 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.87■□□□□ 0.93
PCDHA2-202ENST00000520672 NESP48681 1621 aa20.81■□□□□ 0.92
PCDHA2-202ENST00000520672 CLIP1P30622 1438 aa20.81■□□□□ 0.92
PCDHA2-202ENST00000520672 CCER1Q8TC90 406 aaPredicted RBP20.78■□□□□ 0.92
PCDHA2-202ENST00000520672 APLP2Q06481 763 aa20.76■□□□□ 0.91
PCDHA2-202ENST00000520672 KIF27Q86VH2 1401 aa20.75■□□□□ 0.91
PCDHA2-202ENST00000520672 BIVM-ERCC5R4GMW8 1640 aa20.74■□□□□ 0.91
PCDHA2-202ENST00000520672 YTHDC1Q96MU7 727 aaKnown RBP20.74■□□□□ 0.91
PCDHA2-202ENST00000520672 CUX2O14529 1486 aa20.72■□□□□ 0.91
PCDHA2-202ENST00000520672 FANCD2Q9BXW9 1451 aa20.71■□□□□ 0.91
PCDHA2-202ENST00000520672 KIF21BO75037 1637 aa20.7■□□□□ 0.9
PCDHA2-202ENST00000520672 ANP32EQ9BTT0 268 aa20.69■□□□□ 0.9
PCDHA2-202ENST00000520672 HNRNPUL2Q1KMD3 747 aaKnown RBP20.67■□□□□ 0.9
PCDHA2-202ENST00000520672 FGD5Q6ZNL6 1462 aa20.66■□□□□ 0.9
PCDHA2-202ENST00000520672 DIEXFQ68CQ4 756 aaKnown RBP20.64■□□□□ 0.89
PCDHA2-202ENST00000520672 PRXQ9BXM0 1461 aa20.62■□□□□ 0.89
PCDHA2-202ENST00000520672 RAD54L2Q9Y4B4 1467 aa20.61■□□□□ 0.89
PCDHA2-202ENST00000520672 P3H3Q8IVL6 736 aa20.6■□□□□ 0.89
PCDHA2-202ENST00000520672 IGF1RP08069 1367 aa20.59■□□□□ 0.89
PCDHA2-202ENST00000520672 ERICH6Q7L0X2 663 aa20.57■□□□□ 0.88
PCDHA2-202ENST00000520672 VPS8Q8N3P4 1428 aa20.56■□□□□ 0.88
PCDHA2-202ENST00000520672 ATP1B4Q9UN42 357 aaPredicted RBP20.56■□□□□ 0.88
PCDHA2-202ENST00000520672 CARMIL1Q5VZK9 1371 aa20.54■□□□□ 0.88
PCDHA2-202ENST00000520672 PRDM2Q13029 1718 aa20.5■□□□□ 0.87
PCDHA2-202ENST00000520672 KANK4Q5T7N3 995 aaPredicted RBP20.49■□□□□ 0.87
PCDHA2-202ENST00000520672 TDRD9Q8NDG6 1382 aaKnown RBP20.48■□□□□ 0.87
PCDHA2-202ENST00000520672 TOPBP1Q92547 1522 aa20.47■□□□□ 0.87
PCDHA2-202ENST00000520672 ERICH3Q5RHP9 1530 aa20.46■□□□□ 0.87
PCDHA2-202ENST00000520672 POLA1P09884 1462 aaPredicted RBP20.45■□□□□ 0.86
PCDHA2-202ENST00000520672 ARAP1Q96P48 1450 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms