RNA–Protein interactions for RNA: ENST00000520513.1

LINC00535-204, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 305 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-204ENST00000520513 AEBP2Q6ZN18 517 aaPredicted RBP30.64■■■□□ 2.5
LINC00535-204ENST00000520513 CHIC1Q5VXU3 224 aa29.35■■■□□ 2.29
LINC00535-204ENST00000520513 PHF23Q9BUL5 403 aaPredicted RBP25.89■■□□□ 1.74
LINC00535-204ENST00000520513 SENP3Q9H4L4 574 aaPredicted RBP25.86■■□□□ 1.73
LINC00535-204ENST00000520513 FOXD1Q16676 465 aa24.19■■□□□ 1.46
LINC00535-204ENST00000520513 PLPPR3Q6T4P5 718 aa23.54■■□□□ 1.36
LINC00535-204ENST00000520513 PPP6R1Q9UPN7 881 aa23.01■■□□□ 1.27
LINC00535-204ENST00000520513 ADRA2BP18089 450 aa22.91■■□□□ 1.26
LINC00535-204ENST00000520513 PIAS4Q8N2W9 510 aaPredicted RBP22.61■■□□□ 1.21
LINC00535-204ENST00000520513 MSH5O43196 834 aa22.42■■□□□ 1.18
LINC00535-204ENST00000520513 POTEDQ86YR6 584 aa21.29■■□□□ 1
LINC00535-204ENST00000520513 MAPK8IP2Q13387 824 aaPredicted RBP20.96■□□□□ 0.95
LINC00535-204ENST00000520513 PPP4R3CPQ6ZMV5 832 aa20.76■□□□□ 0.91
LINC00535-204ENST00000520513 SCAF1Q9H7N4 1312 aaKnown RBP20.76■□□□□ 0.91
LINC00535-204ENST00000520513 DMRT2Q9Y5R5 561 aa20.63■□□□□ 0.89
LINC00535-204ENST00000520513 CNKSR2Q8WXI2 1034 aa20.22■□□□□ 0.83
LINC00535-204ENST00000520513 HOXD11P31277 338 aaPredicted RBP20.03■□□□□ 0.8
LINC00535-204ENST00000520513 RNF216Q9NWF9 866 aaPredicted RBP19.95■□□□□ 0.78
LINC00535-204ENST00000520513 NCBP3Q53F19 620 aaKnown RBP19.93■□□□□ 0.78
LINC00535-204ENST00000520513 KCNA4P22459 653 aa19.85■□□□□ 0.77
LINC00535-204ENST00000520513 NPM3O75607 178 aaKnown RBP19.83■□□□□ 0.77
LINC00535-204ENST00000520513 DCAF8L1A6NGE4 600 aa19.69■□□□□ 0.74
LINC00535-204ENST00000520513 DNAJC5BQ9UF47 199 aa19.26■□□□□ 0.67
LINC00535-204ENST00000520513 RNF39Q9H2S5 420 aa19.18■□□□□ 0.66
LINC00535-204ENST00000520513 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19■□□□□ 0.63
LINC00535-204ENST00000520513 CACNB1Q02641 598 aaPredicted RBP18.98■□□□□ 0.63
LINC00535-204ENST00000520513 SLC4A2P04920 1241 aa18.9■□□□□ 0.62
LINC00535-204ENST00000520513 C1QBPQ07021 282 aaKnown RBP18.89■□□□□ 0.61
LINC00535-204ENST00000520513 U3KPZ7 1027 aaPredicted RBP18.78■□□□□ 0.6
LINC00535-204ENST00000520513 SLC4A1APQ9BWU0 796 aaKnown RBP18.72■□□□□ 0.59
LINC00535-204ENST00000520513 SPINK5Q9NQ38 1064 aaPredicted RBP18.41■□□□□ 0.54
LINC00535-204ENST00000520513 ZBTB22O15209 634 aa18.34■□□□□ 0.53
LINC00535-204ENST00000520513 FOXD4L1Q9NU39 408 aa18.29■□□□□ 0.52
LINC00535-204ENST00000520513 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.23■□□□□ 0.51
LINC00535-204ENST00000520513 CAPN15O75808 1086 aa18.23■□□□□ 0.51
LINC00535-204ENST00000520513 MYCNP04198 464 aaPredicted RBP18.23■□□□□ 0.51
LINC00535-204ENST00000520513 HNRNPUL2Q1KMD3 747 aaKnown RBP18.23■□□□□ 0.51
LINC00535-204ENST00000520513 APLP2Q06481 763 aa18.19■□□□□ 0.5
LINC00535-204ENST00000520513 SAMD1Q6SPF0 538 aaPredicted RBP18.13■□□□□ 0.49
LINC00535-204ENST00000520513 DSG3P32926 999 aa18.11■□□□□ 0.49
LINC00535-204ENST00000520513 TRHP20396 242 aaPredicted RBP18.06■□□□□ 0.48
LINC00535-204ENST00000520513 ZNF219Q9P2Y4 722 aaPredicted RBP17.99■□□□□ 0.47
LINC00535-204ENST00000520513 ATF5Q9Y2D1 282 aaPredicted RBP17.98■□□□□ 0.47
LINC00535-204ENST00000520513 ABCB7O75027 752 aa17.93■□□□□ 0.46
LINC00535-204ENST00000520513 CSRNP3Q8WYN3 585 aa17.8■□□□□ 0.44
LINC00535-204ENST00000520513 EHMT2Q96KQ7 1210 aa17.72■□□□□ 0.43
LINC00535-204ENST00000520513 POLA2Q14181 598 aa17.69■□□□□ 0.42
LINC00535-204ENST00000520513 ATXN8OSP0DMR3 200 aa17.62■□□□□ 0.41
LINC00535-204ENST00000520513 ZBTB12Q9Y330 459 aaPredicted RBP17.29■□□□□ 0.36
LINC00535-204ENST00000520513 RBM42Q9BTD8 480 aaKnown RBP17.23■□□□□ 0.35
LINC00535-204ENST00000520513 MKRN4PQ13434 485 aaPredicted RBP17.15■□□□□ 0.34
LINC00535-204ENST00000520513 OSCARQ8IYS5 282 aa17.14■□□□□ 0.33
LINC00535-204ENST00000520513 FBLN2P98095 1184 aa16.98■□□□□ 0.31
LINC00535-204ENST00000520513 AKT1S1Q96B36 256 aa16.88■□□□□ 0.29
LINC00535-204ENST00000520513 SPDYE2BA6NHP3 402 aa16.79■□□□□ 0.28
LINC00535-204ENST00000520513 SPDYE6P0CI01 402 aa16.79■□□□□ 0.28
LINC00535-204ENST00000520513 SPDYE2Q495Y8 402 aa16.79■□□□□ 0.28
LINC00535-204ENST00000520513 REM2Q8IYK8 340 aaPredicted RBP16.77■□□□□ 0.28
LINC00535-204ENST00000520513 POTEHQ6S545 545 aa16.76■□□□□ 0.27
LINC00535-204ENST00000520513 SSUH2Q9Y2M2 353 aa16.69■□□□□ 0.26
LINC00535-204ENST00000520513 CHRDL2Q6WN34 429 aa16.68■□□□□ 0.26
LINC00535-204ENST00000520513 ZNF692Q9BU19 519 aaPredicted RBP16.67■□□□□ 0.26
LINC00535-204ENST00000520513 PITPNM1O00562 1244 aa16.61■□□□□ 0.25
LINC00535-204ENST00000520513 PABPN1Q86U42 306 aaKnown RBP eCLIP16.48■□□□□ 0.23
LINC00535-204ENST00000520513 PIP4P2Q8N4L2 257 aa16.42■□□□□ 0.22
LINC00535-204ENST00000520513 SPDYE4A6NLX3 237 aa16.41■□□□□ 0.22
LINC00535-204ENST00000520513 FXR2P51116 673 aaKnown RBP eCLIP16.38■□□□□ 0.21
LINC00535-204ENST00000520513 SPDYE1Q8NFV5 336 aaPredicted RBP16.38■□□□□ 0.21
LINC00535-204ENST00000520513 CLEC11AQ9Y240 323 aa16.37■□□□□ 0.21
LINC00535-204ENST00000520513 PROM2Q8N271 834 aa16.15■□□□□ 0.18
LINC00535-204ENST00000520513 PRKAR2AP13861 404 aaKnown RBP16.14■□□□□ 0.17
LINC00535-204ENST00000520513 PRR29P0C7W0 189 aa16.13■□□□□ 0.17
LINC00535-204ENST00000520513 CHADLQ6NUI6 762 aa16.12■□□□□ 0.17
LINC00535-204ENST00000520513 FKBP8Q14318 412 aa16.03■□□□□ 0.16
LINC00535-204ENST00000520513 STAG3Q9UJ98 1225 aa16■□□□□ 0.15
LINC00535-204ENST00000520513 EVX2Q03828 476 aa15.97■□□□□ 0.15
LINC00535-204ENST00000520513 CREBZFQ9NS37 354 aa15.94■□□□□ 0.14
LINC00535-204ENST00000520513 HAX1O00165 279 aa15.93■□□□□ 0.14
LINC00535-204ENST00000520513 SP7Q8TDD2 431 aaPredicted RBP15.87■□□□□ 0.13
LINC00535-204ENST00000520513 FARP1Q9Y4F1 1045 aaPredicted RBP15.86■□□□□ 0.13
LINC00535-204ENST00000520513 C19orf67A6NJJ6 358 aa15.83■□□□□ 0.12
LINC00535-204ENST00000520513 MNX1P50219 401 aaPredicted RBP15.77■□□□□ 0.12
LINC00535-204ENST00000520513 CD44P16070 742 aaKnown RBP15.64■□□□□ 0.09
LINC00535-204ENST00000520513 MIER1Q8N108 512 aa15.57■□□□□ 0.08
LINC00535-204ENST00000520513 NPM1P06748 294 aaKnown RBP eCLIP15.51■□□□□ 0.07
LINC00535-204ENST00000520513 GABBR2O75899 941 aa15.5■□□□□ 0.07
LINC00535-204ENST00000520513 ZRANB1Q9UGI0 708 aa15.49■□□□□ 0.07
LINC00535-204ENST00000520513 PLCD3Q8N3E9 789 aa15.46■□□□□ 0.07
LINC00535-204ENST00000520513 PLEKHG5O94827 1062 aa15.45■□□□□ 0.06
LINC00535-204ENST00000520513 ZNF579Q8NAF0 562 aaKnown RBP15.43■□□□□ 0.06
LINC00535-204ENST00000520513 FBXO3Q9UK99 471 aa15.43■□□□□ 0.06
LINC00535-204ENST00000520513 CLCN6P51797 869 aa15.41■□□□□ 0.06
LINC00535-204ENST00000520513 PAK3O75914 559 aaPredicted RBP15.4■□□□□ 0.06
LINC00535-204ENST00000520513 RASEFQ8IZ41 740 aa15.38■□□□□ 0.05
LINC00535-204ENST00000520513 PHF12Q96QT6 1004 aa15.38■□□□□ 0.05
LINC00535-204ENST00000520513 VASPP50552 380 aaPredicted RBP15.37■□□□□ 0.05
LINC00535-204ENST00000520513 TSPYL2Q9H2G4 693 aaPredicted RBP15.34■□□□□ 0.05
LINC00535-204ENST00000520513 NUBP1P53384 320 aa15.32■□□□□ 0.04
LINC00535-204ENST00000520513 GALR2O43603 387 aaPredicted RBP15.29■□□□□ 0.04
LINC00535-204ENST00000520513 CCDC61Q9Y6R9 512 aa15.29■□□□□ 0.04
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