RNA–Protein interactions for RNA: ENST00000519888.5

AP3B1-205, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 5

Gene AP3B1, Length 519 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-205ENST00000519888 AEBP2Q6ZN18 517 aaPredicted RBP28.62■■■□□ 2.17
AP3B1-205ENST00000519888 CHIC1Q5VXU3 224 aa27.43■■□□□ 1.98
AP3B1-205ENST00000519888 SENP3Q9H4L4 574 aaPredicted RBP24.44■■□□□ 1.5
AP3B1-205ENST00000519888 PHF23Q9BUL5 403 aaPredicted RBP24.14■■□□□ 1.45
AP3B1-205ENST00000519888 FOXD1Q16676 465 aa22.72■■□□□ 1.23
AP3B1-205ENST00000519888 PLPPR3Q6T4P5 718 aa22.05■■□□□ 1.12
AP3B1-205ENST00000519888 PPP6R1Q9UPN7 881 aa21.39■■□□□ 1.01
AP3B1-205ENST00000519888 ADRA2BP18089 450 aa21.35■■□□□ 1.01
AP3B1-205ENST00000519888 PIAS4Q8N2W9 510 aaPredicted RBP21.31■■□□□ 1
AP3B1-205ENST00000519888 MSH5O43196 834 aa21.22■□□□□ 0.99
AP3B1-205ENST00000519888 POTEDQ86YR6 584 aa20.3■□□□□ 0.84
AP3B1-205ENST00000519888 SCAF1Q9H7N4 1312 aaKnown RBP19.61■□□□□ 0.73
AP3B1-205ENST00000519888 MAPK8IP2Q13387 824 aaPredicted RBP19.55■□□□□ 0.72
AP3B1-205ENST00000519888 DMRT2Q9Y5R5 561 aa19.4■□□□□ 0.7
AP3B1-205ENST00000519888 PPP4R3CPQ6ZMV5 832 aa19.34■□□□□ 0.69
AP3B1-205ENST00000519888 CNKSR2Q8WXI2 1034 aa18.94■□□□□ 0.62
AP3B1-205ENST00000519888 HOXD11P31277 338 aaPredicted RBP18.77■□□□□ 0.6
AP3B1-205ENST00000519888 NCBP3Q53F19 620 aaKnown RBP18.7■□□□□ 0.58
AP3B1-205ENST00000519888 RNF216Q9NWF9 866 aaPredicted RBP18.7■□□□□ 0.58
AP3B1-205ENST00000519888 DCAF8L1A6NGE4 600 aa18.64■□□□□ 0.57
AP3B1-205ENST00000519888 NPM3O75607 178 aaKnown RBP18.38■□□□□ 0.53
AP3B1-205ENST00000519888 KCNA4P22459 653 aa18.21■□□□□ 0.51
AP3B1-205ENST00000519888 RNF39Q9H2S5 420 aa18.1■□□□□ 0.49
AP3B1-205ENST00000519888 DNAJC5BQ9UF47 199 aa18.09■□□□□ 0.49
AP3B1-205ENST00000519888 CACNB1Q02641 598 aaPredicted RBP18.08■□□□□ 0.48
AP3B1-205ENST00000519888 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.92■□□□□ 0.46
AP3B1-205ENST00000519888 C1QBPQ07021 282 aaKnown RBP17.87■□□□□ 0.45
AP3B1-205ENST00000519888 U3KPZ7 1027 aaPredicted RBP17.53■□□□□ 0.4
AP3B1-205ENST00000519888 SLC4A2P04920 1241 aa17.48■□□□□ 0.39
AP3B1-205ENST00000519888 SLC4A1APQ9BWU0 796 aaKnown RBP17.27■□□□□ 0.36
AP3B1-205ENST00000519888 CAPN15O75808 1086 aa17.21■□□□□ 0.35
AP3B1-205ENST00000519888 SPINK5Q9NQ38 1064 aaPredicted RBP17.21■□□□□ 0.35
AP3B1-205ENST00000519888 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.17■□□□□ 0.34
AP3B1-205ENST00000519888 HNRNPUL2Q1KMD3 747 aaKnown RBP17.17■□□□□ 0.34
AP3B1-205ENST00000519888 APLP2Q06481 763 aa17.14■□□□□ 0.33
AP3B1-205ENST00000519888 SAMD1Q6SPF0 538 aaPredicted RBP17.07■□□□□ 0.32
AP3B1-205ENST00000519888 MYCNP04198 464 aaPredicted RBP17.02■□□□□ 0.32
AP3B1-205ENST00000519888 DSG3P32926 999 aa17.02■□□□□ 0.32
AP3B1-205ENST00000519888 TRHP20396 242 aaPredicted RBP16.98■□□□□ 0.31
AP3B1-205ENST00000519888 FOXD4L1Q9NU39 408 aa16.96■□□□□ 0.31
AP3B1-205ENST00000519888 ZNF219Q9P2Y4 722 aaPredicted RBP16.96■□□□□ 0.31
AP3B1-205ENST00000519888 ABCB7O75027 752 aa16.81■□□□□ 0.28
AP3B1-205ENST00000519888 ZBTB22O15209 634 aa16.73■□□□□ 0.27
AP3B1-205ENST00000519888 POLA2Q14181 598 aa16.57■□□□□ 0.24
AP3B1-205ENST00000519888 ATF5Q9Y2D1 282 aaPredicted RBP16.56■□□□□ 0.24
AP3B1-205ENST00000519888 ATXN8OSP0DMR3 200 aa16.42■□□□□ 0.22
AP3B1-205ENST00000519888 RBM42Q9BTD8 480 aaKnown RBP16.28■□□□□ 0.2
AP3B1-205ENST00000519888 ZBTB12Q9Y330 459 aaPredicted RBP16.28■□□□□ 0.2
AP3B1-205ENST00000519888 CSRNP3Q8WYN3 585 aa16.17■□□□□ 0.18
AP3B1-205ENST00000519888 EHMT2Q96KQ7 1210 aa16.12■□□□□ 0.17
AP3B1-205ENST00000519888 OSCARQ8IYS5 282 aa16.02■□□□□ 0.16
AP3B1-205ENST00000519888 FBLN2P98095 1184 aa15.97■□□□□ 0.15
AP3B1-205ENST00000519888 POTEHQ6S545 545 aa15.97■□□□□ 0.15
AP3B1-205ENST00000519888 AKT1S1Q96B36 256 aa15.94■□□□□ 0.14
AP3B1-205ENST00000519888 MKRN4PQ13434 485 aaPredicted RBP15.81■□□□□ 0.12
AP3B1-205ENST00000519888 CHRDL2Q6WN34 429 aa15.81■□□□□ 0.12
AP3B1-205ENST00000519888 SPDYE2BA6NHP3 402 aa15.78■□□□□ 0.12
AP3B1-205ENST00000519888 SPDYE6P0CI01 402 aa15.78■□□□□ 0.12
AP3B1-205ENST00000519888 SPDYE2Q495Y8 402 aa15.78■□□□□ 0.12
AP3B1-205ENST00000519888 REM2Q8IYK8 340 aaPredicted RBP15.77■□□□□ 0.12
AP3B1-205ENST00000519888 ZNF692Q9BU19 519 aaPredicted RBP15.63■□□□□ 0.09
AP3B1-205ENST00000519888 PITPNM1O00562 1244 aa15.59■□□□□ 0.09
AP3B1-205ENST00000519888 SSUH2Q9Y2M2 353 aa15.56■□□□□ 0.08
AP3B1-205ENST00000519888 PIP4P2Q8N4L2 257 aa15.47■□□□□ 0.07
AP3B1-205ENST00000519888 SPDYE1Q8NFV5 336 aaPredicted RBP15.45■□□□□ 0.06
AP3B1-205ENST00000519888 CLEC11AQ9Y240 323 aa15.43■□□□□ 0.06
AP3B1-205ENST00000519888 FXR2P51116 673 aaKnown RBP eCLIP15.41■□□□□ 0.06
AP3B1-205ENST00000519888 PABPN1Q86U42 306 aaKnown RBP eCLIP15.4■□□□□ 0.06
AP3B1-205ENST00000519888 SPDYE4A6NLX3 237 aa15.22■□□□□ 0.03
AP3B1-205ENST00000519888 PRKAR2AP13861 404 aaKnown RBP15.22■□□□□ 0.03
AP3B1-205ENST00000519888 PRR29P0C7W0 189 aa15.2■□□□□ 0.02
AP3B1-205ENST00000519888 HAX1O00165 279 aa15.17■□□□□ 0.02
AP3B1-205ENST00000519888 CHADLQ6NUI6 762 aa15.08■□□□□ 0
AP3B1-205ENST00000519888 SP7Q8TDD2 431 aaPredicted RBP15.08■□□□□ 0
AP3B1-205ENST00000519888 STAG3Q9UJ98 1225 aa15.05■□□□□ -0
AP3B1-205ENST00000519888 EVX2Q03828 476 aa14.93□□□□□ -0.02
AP3B1-205ENST00000519888 C19orf67A6NJJ6 358 aa14.91□□□□□ -0.02
AP3B1-205ENST00000519888 FARP1Q9Y4F1 1045 aaPredicted RBP14.89□□□□□ -0.03
AP3B1-205ENST00000519888 PROM2Q8N271 834 aa14.85□□□□□ -0.03
AP3B1-205ENST00000519888 CREBZFQ9NS37 354 aa14.83□□□□□ -0.04
AP3B1-205ENST00000519888 CD44P16070 742 aaKnown RBP14.75□□□□□ -0.05
AP3B1-205ENST00000519888 FKBP8Q14318 412 aa14.69□□□□□ -0.06
AP3B1-205ENST00000519888 GABBR2O75899 941 aa14.65□□□□□ -0.06
AP3B1-205ENST00000519888 NPM1P06748 294 aaKnown RBP eCLIP14.63□□□□□ -0.07
AP3B1-205ENST00000519888 MNX1P50219 401 aaPredicted RBP14.58□□□□□ -0.08
AP3B1-205ENST00000519888 ZRANB1Q9UGI0 708 aa14.58□□□□□ -0.08
AP3B1-205ENST00000519888 PAK3O75914 559 aaPredicted RBP14.54□□□□□ -0.08
AP3B1-205ENST00000519888 PLEKHG5O94827 1062 aa14.53□□□□□ -0.08
AP3B1-205ENST00000519888 CLCN6P51797 869 aa14.53□□□□□ -0.08
AP3B1-205ENST00000519888 MIER1Q8N108 512 aa14.52□□□□□ -0.09
AP3B1-205ENST00000519888 ZNF579Q8NAF0 562 aaKnown RBP14.51□□□□□ -0.09
AP3B1-205ENST00000519888 PLCD3Q8N3E9 789 aa14.45□□□□□ -0.1
AP3B1-205ENST00000519888 PHF12Q96QT6 1004 aa14.37□□□□□ -0.11
AP3B1-205ENST00000519888 FBXO3Q9UK99 471 aa14.36□□□□□ -0.11
AP3B1-205ENST00000519888 TSPYL2Q9H2G4 693 aaPredicted RBP14.35□□□□□ -0.11
AP3B1-205ENST00000519888 DCBLD2Q96PD2 775 aa14.34□□□□□ -0.11
AP3B1-205ENST00000519888 ZBTB47Q9UFB7 747 aaPredicted RBP14.33□□□□□ -0.12
AP3B1-205ENST00000519888 GALR2O43603 387 aaPredicted RBP14.31□□□□□ -0.12
AP3B1-205ENST00000519888 POTEIP0CG38 1075 aa14.3□□□□□ -0.12
AP3B1-205ENST00000519888 RASEFQ8IZ41 740 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms