RNA–Protein interactions for RNA: ENST00000519429.1

GSDMB-211, Transcript of gasdermin B, humanhuman

TSL 5

Gene GSDMB, Length 616 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-211ENST00000519429 CHIC1Q5VXU3 224 aa20.14■□□□□ 0.81
GSDMB-211ENST00000519429 AEBP2Q6ZN18 517 aaPredicted RBP19.76■□□□□ 0.75
GSDMB-211ENST00000519429 PHF23Q9BUL5 403 aaPredicted RBP17.7■□□□□ 0.42
GSDMB-211ENST00000519429 SENP3Q9H4L4 574 aaPredicted RBP16.81■□□□□ 0.28
GSDMB-211ENST00000519429 PLPPR3Q6T4P5 718 aa16.74■□□□□ 0.27
GSDMB-211ENST00000519429 ADRA2BP18089 450 aa15.49■□□□□ 0.07
GSDMB-211ENST00000519429 FOXD1Q16676 465 aa15.4■□□□□ 0.06
GSDMB-211ENST00000519429 PPP6R1Q9UPN7 881 aa15.34■□□□□ 0.05
GSDMB-211ENST00000519429 KCNA4P22459 653 aa15.24■□□□□ 0.03
GSDMB-211ENST00000519429 EHMT2Q96KQ7 1210 aa15.07■□□□□ 0
GSDMB-211ENST00000519429 PPP4R3CPQ6ZMV5 832 aa14.79□□□□□ -0.04
GSDMB-211ENST00000519429 PIAS4Q8N2W9 510 aaPredicted RBP14.75□□□□□ -0.05
GSDMB-211ENST00000519429 NCBP3Q53F19 620 aaKnown RBP14.71□□□□□ -0.05
GSDMB-211ENST00000519429 SLC4A1APQ9BWU0 796 aaKnown RBP14.71□□□□□ -0.05
GSDMB-211ENST00000519429 CSRNP3Q8WYN3 585 aa14.57□□□□□ -0.08
GSDMB-211ENST00000519429 NISCHQ9Y2I1 1504 aa14.45□□□□□ -0.1
GSDMB-211ENST00000519429 NPM3O75607 178 aaKnown RBP14.38□□□□□ -0.11
GSDMB-211ENST00000519429 SCAF1Q9H7N4 1312 aaKnown RBP14.27□□□□□ -0.12
GSDMB-211ENST00000519429 CNKSR2Q8WXI2 1034 aa14.26□□□□□ -0.13
GSDMB-211ENST00000519429 MSH5O43196 834 aa14.03□□□□□ -0.16
GSDMB-211ENST00000519429 ZBTB22O15209 634 aa13.99□□□□□ -0.17
GSDMB-211ENST00000519429 DNAJC5BQ9UF47 199 aa13.99□□□□□ -0.17
GSDMB-211ENST00000519429 FOXD4L1Q9NU39 408 aa13.89□□□□□ -0.19
GSDMB-211ENST00000519429 ABCC9O60706 1549 aa13.82□□□□□ -0.2
GSDMB-211ENST00000519429 RNF216Q9NWF9 866 aaPredicted RBP13.8□□□□□ -0.2
GSDMB-211ENST00000519429 MAPK8IP2Q13387 824 aaPredicted RBP13.71□□□□□ -0.21
GSDMB-211ENST00000519429 HOXD11P31277 338 aaPredicted RBP13.53□□□□□ -0.24
GSDMB-211ENST00000519429 DMRT2Q9Y5R5 561 aa13.5□□□□□ -0.25
GSDMB-211ENST00000519429 ATXN8OSP0DMR3 200 aa13.41□□□□□ -0.26
GSDMB-211ENST00000519429 AMER1Q5JTC6 1135 aaPredicted RBP13.4□□□□□ -0.26
GSDMB-211ENST00000519429 SLC4A2P04920 1241 aa13.37□□□□□ -0.27
GSDMB-211ENST00000519429 MYCNP04198 464 aaPredicted RBP13.36□□□□□ -0.27
GSDMB-211ENST00000519429 SLC24A1O60721 1099 aa13.27□□□□□ -0.29
GSDMB-211ENST00000519429 CCDC180Q9P1Z9 1646 aa13.27□□□□□ -0.29
GSDMB-211ENST00000519429 RTN4Q9NQC3 1192 aaKnown RBP13.25□□□□□ -0.29
GSDMB-211ENST00000519429 FKBP8Q14318 412 aa13.15□□□□□ -0.3
GSDMB-211ENST00000519429 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.97□□□□□ -0.33
GSDMB-211ENST00000519429 HNRNPUL2Q1KMD3 747 aaKnown RBP12.97□□□□□ -0.33
GSDMB-211ENST00000519429 SAMD1Q6SPF0 538 aaPredicted RBP12.92□□□□□ -0.34
GSDMB-211ENST00000519429 RB1CC1Q8TDY2 1594 aa12.9□□□□□ -0.35
GSDMB-211ENST00000519429 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.88□□□□□ -0.358e-6■■■□□ 19
GSDMB-211ENST00000519429 DCAF8L1A6NGE4 600 aa12.83□□□□□ -0.36
GSDMB-211ENST00000519429 ATF5Q9Y2D1 282 aaPredicted RBP12.79□□□□□ -0.36
GSDMB-211ENST00000519429 PABPN1Q86U42 306 aaKnown RBP eCLIP12.75□□□□□ -0.373e-14■□□□□ 9.1
GSDMB-211ENST00000519429 U3KPZ7 1027 aaPredicted RBP12.72□□□□□ -0.37
GSDMB-211ENST00000519429 UNC13AQ9UPW8 1703 aa12.71□□□□□ -0.38
GSDMB-211ENST00000519429 APLP2Q06481 763 aa12.69□□□□□ -0.38
GSDMB-211ENST00000519429 DNAJC5Q9H3Z4 198 aa12.68□□□□□ -0.38
GSDMB-211ENST00000519429 NACADO15069 1562 aa12.62□□□□□ -0.39
GSDMB-211ENST00000519429 FBXO3Q9UK99 471 aa12.61□□□□□ -0.39
GSDMB-211ENST00000519429 ZNF219Q9P2Y4 722 aaPredicted RBP12.6□□□□□ -0.39
GSDMB-211ENST00000519429 BICRAQ9NZM4 1560 aa12.52□□□□□ -0.4
GSDMB-211ENST00000519429 DCAF8L2P0C7V8 631 aa12.51□□□□□ -0.41
GSDMB-211ENST00000519429 CECR2Q9BXF3 1484 aa12.47□□□□□ -0.41
GSDMB-211ENST00000519429 SPDYE4A6NLX3 237 aa12.46□□□□□ -0.41
GSDMB-211ENST00000519429 CC2D2AQ9P2K1 1620 aa12.46□□□□□ -0.41
GSDMB-211ENST00000519429 PROM2Q8N271 834 aa12.38□□□□□ -0.43
GSDMB-211ENST00000519429 FBLN2P98095 1184 aa12.37□□□□□ -0.43
GSDMB-211ENST00000519429 VASPP50552 380 aaPredicted RBP12.33□□□□□ -0.44
GSDMB-211ENST00000519429 MKRN4PQ13434 485 aaPredicted RBP12.31□□□□□ -0.44
GSDMB-211ENST00000519429 PLCB2Q00722 1185 aa12.29□□□□□ -0.44
GSDMB-211ENST00000519429 EIF4G1Q04637 1599 aaKnown RBP12.27□□□□□ -0.44
GSDMB-211ENST00000519429 SHROOM4Q9ULL8 1493 aa12.22□□□□□ -0.45
GSDMB-211ENST00000519429 MYO15BQ96JP2 1530 aa12.19□□□□□ -0.46
GSDMB-211ENST00000519429 TRHP20396 242 aaPredicted RBP12.18□□□□□ -0.46
GSDMB-211ENST00000519429 POLA2Q14181 598 aa12.16□□□□□ -0.46
GSDMB-211ENST00000519429 IFNLR1Q8IU57 520 aaPredicted RBP12.16□□□□□ -0.46
GSDMB-211ENST00000519429 ZBTB12Q9Y330 459 aaPredicted RBP12.16□□□□□ -0.46
GSDMB-211ENST00000519429 SCRIBQ14160 1630 aa12.11□□□□□ -0.47
GSDMB-211ENST00000519429 SPINK5Q9NQ38 1064 aaPredicted RBP12.1□□□□□ -0.47
GSDMB-211ENST00000519429 CUX2O14529 1486 aa12.09□□□□□ -0.47
GSDMB-211ENST00000519429 HAP1P54257 671 aaPredicted RBP12.08□□□□□ -0.48
GSDMB-211ENST00000519429 CAPN15O75808 1086 aa12.07□□□□□ -0.48
GSDMB-211ENST00000519429 PKD2Q13563 968 aa12.05□□□□□ -0.48
GSDMB-211ENST00000519429 RNF39Q9H2S5 420 aa12.03□□□□□ -0.48
GSDMB-211ENST00000519429 TRIM41Q8WV44 630 aa12.01□□□□□ -0.49
GSDMB-211ENST00000519429 BCANQ96GW7 911 aa12□□□□□ -0.49
GSDMB-211ENST00000519429 C1QBPQ07021 282 aaKnown RBP11.99□□□□□ -0.49
GSDMB-211ENST00000519429 VSIG10Q8N0Z9 540 aa11.99□□□□□ -0.49
GSDMB-211ENST00000519429 ERCC6Q03468 1493 aa11.98□□□□□ -0.49
GSDMB-211ENST00000519429 SPOCK2Q92563 424 aa11.97□□□□□ -0.49
GSDMB-211ENST00000519429 STAG3Q9UJ98 1225 aa11.96□□□□□ -0.49
GSDMB-211ENST00000519429 KLHL34Q8N239 644 aa11.95□□□□□ -0.5
GSDMB-211ENST00000519429 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.95□□□□□ -0.5
GSDMB-211ENST00000519429 BBXQ8WY36 941 aaPredicted RBP11.92□□□□□ -0.5
GSDMB-211ENST00000519429 ECM2O94769 699 aaPredicted RBP11.88□□□□□ -0.51
GSDMB-211ENST00000519429 ZNF692Q9BU19 519 aaPredicted RBP11.86□□□□□ -0.51
GSDMB-211ENST00000519429 DCAF1Q9Y4B6 1507 aa11.86□□□□□ -0.51
GSDMB-211ENST00000519429 ZCCHC6Q5VYS8 1495 aaKnown RBP11.85□□□□□ -0.51
GSDMB-211ENST00000519429 ABCB7O75027 752 aa11.85□□□□□ -0.51
GSDMB-211ENST00000519429 SPDYE2BA6NHP3 402 aa11.84□□□□□ -0.51
GSDMB-211ENST00000519429 SPDYE6P0CI01 402 aa11.84□□□□□ -0.51
GSDMB-211ENST00000519429 SPDYE2Q495Y8 402 aa11.84□□□□□ -0.51
GSDMB-211ENST00000519429 PLCD3Q8N3E9 789 aa11.82□□□□□ -0.52
GSDMB-211ENST00000519429 SSUH2Q9Y2M2 353 aa11.78□□□□□ -0.52
GSDMB-211ENST00000519429 PAXIP1Q6ZW49 1069 aaPredicted RBP11.76□□□□□ -0.53
GSDMB-211ENST00000519429 ZBTB47Q9UFB7 747 aaPredicted RBP11.75□□□□□ -0.53
GSDMB-211ENST00000519429 TAOK2Q9UL54 1235 aa11.75□□□□□ -0.53
GSDMB-211ENST00000519429 PLEKHG5O94827 1062 aa11.74□□□□□ -0.53
GSDMB-211ENST00000519429 MIER1Q8N108 512 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms