RNA–Protein interactions for RNA: ENST00000519110.5

FAM49B-212, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49B, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-212ENST00000519110 AEBP2Q6ZN18 517 aaPredicted RBP14.03□□□□□ -0.16
FAM49B-212ENST00000519110 CHIC1Q5VXU3 224 aa13.17□□□□□ -0.3
FAM49B-212ENST00000519110 SENP3Q9H4L4 574 aaPredicted RBP12.12□□□□□ -0.47
FAM49B-212ENST00000519110 PHF23Q9BUL5 403 aaPredicted RBP11.87□□□□□ -0.51
FAM49B-212ENST00000519110 POTEDQ86YR6 584 aa11.76□□□□□ -0.53
FAM49B-212ENST00000519110 FOXD1Q16676 465 aa11.34□□□□□ -0.59
FAM49B-212ENST00000519110 MSH5O43196 834 aa10.88□□□□□ -0.67
FAM49B-212ENST00000519110 DNAJC5Q9H3Z4 198 aa10.67□□□□□ -0.7
FAM49B-212ENST00000519110 PIAS4Q8N2W9 510 aaPredicted RBP10.48□□□□□ -0.73
FAM49B-212ENST00000519110 DNAJC5BQ9UF47 199 aa10.21□□□□□ -0.78
FAM49B-212ENST00000519110 NISCHQ9Y2I1 1504 aa10.16□□□□□ -0.78
FAM49B-212ENST00000519110 PPP6R1Q9UPN7 881 aa10.13□□□□□ -0.79
FAM49B-212ENST00000519110 ADRA2BP18089 450 aa10.09□□□□□ -0.79
FAM49B-212ENST00000519110 PLPPR3Q6T4P5 718 aa9.97□□□□□ -0.81
FAM49B-212ENST00000519110 CACNB1Q02641 598 aaPredicted RBP9.7□□□□□ -0.86
FAM49B-212ENST00000519110 ILDR1Q86SU0 546 aaPredicted RBP9.52□□□□□ -0.89
FAM49B-212ENST00000519110 DMRT2Q9Y5R5 561 aa9.5□□□□□ -0.89
FAM49B-212ENST00000519110 MAPK8IP2Q13387 824 aaPredicted RBP9.44□□□□□ -0.9
FAM49B-212ENST00000519110 TRIM41Q8WV44 630 aa9.39□□□□□ -0.91
FAM49B-212ENST00000519110 SCAF1Q9H7N4 1312 aaKnown RBP9.28□□□□□ -0.92
FAM49B-212ENST00000519110 DCAF8L1A6NGE4 600 aa9.19□□□□□ -0.94
FAM49B-212ENST00000519110 RNF39Q9H2S5 420 aa9.19□□□□□ -0.94
FAM49B-212ENST00000519110 ABCC9O60706 1549 aa9.07□□□□□ -0.96
FAM49B-212ENST00000519110 C1QBPQ07021 282 aaKnown RBP9.05□□□□□ -0.96
FAM49B-212ENST00000519110 POTEHQ6S545 545 aa8.98□□□□□ -0.97
FAM49B-212ENST00000519110 CCDC180Q9P1Z9 1646 aa8.96□□□□□ -0.97
FAM49B-212ENST00000519110 HOXD11P31277 338 aaPredicted RBP8.91□□□□□ -0.98
FAM49B-212ENST00000519110 SOCS7O14512 581 aa8.9□□□□□ -0.99
FAM49B-212ENST00000519110 LMTK3Q96Q04 1460 aa8.78□□□□□ -1
FAM49B-212ENST00000519110 RNF216Q9NWF9 866 aaPredicted RBP8.7□□□□□ -1.02
FAM49B-212ENST00000519110 ILDR2Q71H61 639 aa8.66□□□□□ -1.02
FAM49B-212ENST00000519110 PPP4R3CPQ6ZMV5 832 aa8.66□□□□□ -1.02
FAM49B-212ENST00000519110 CNKSR2Q8WXI2 1034 aa8.64□□□□□ -1.03
FAM49B-212ENST00000519110 CUX2O14529 1486 aa8.58□□□□□ -1.04
FAM49B-212ENST00000519110 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.54□□□□□ -1.04
FAM49B-212ENST00000519110 ZCCHC6Q5VYS8 1495 aaKnown RBP8.49□□□□□ -1.05
FAM49B-212ENST00000519110 DSG3P32926 999 aa8.42□□□□□ -1.06
FAM49B-212ENST00000519110 PABPN1Q86U42 306 aaKnown RBP eCLIP8.42□□□□□ -1.06
FAM49B-212ENST00000519110 FBXO41Q8TF61 875 aa8.41□□□□□ -1.06
FAM49B-212ENST00000519110 DCAF1Q9Y4B6 1507 aa8.41□□□□□ -1.06
FAM49B-212ENST00000519110 DCAF8L2P0C7V8 631 aa8.41□□□□□ -1.06
FAM49B-212ENST00000519110 MYO15BQ96JP2 1530 aa8.38□□□□□ -1.07
FAM49B-212ENST00000519110 NACADO15069 1562 aa8.38□□□□□ -1.07
FAM49B-212ENST00000519110 CAPN15O75808 1086 aa8.37□□□□□ -1.07
FAM49B-212ENST00000519110 CECR2Q9BXF3 1484 aa8.36□□□□□ -1.07
FAM49B-212ENST00000519110 RB1CC1Q8TDY2 1594 aa8.35□□□□□ -1.07
FAM49B-212ENST00000519110 SPINK5Q9NQ38 1064 aaPredicted RBP8.31□□□□□ -1.08
FAM49B-212ENST00000519110 DISP3Q9P2K9 1392 aa8.3□□□□□ -1.08
FAM49B-212ENST00000519110 TRHP20396 242 aaPredicted RBP8.25□□□□□ -1.09
FAM49B-212ENST00000519110 U3KPZ7 1027 aaPredicted RBP8.25□□□□□ -1.09
FAM49B-212ENST00000519110 UNC13AQ9UPW8 1703 aa8.21□□□□□ -1.09
FAM49B-212ENST00000519110 SCRIBQ14160 1630 aa8.19□□□□□ -1.1
FAM49B-212ENST00000519110 NCBP3Q53F19 620 aaKnown RBP8.18□□□□□ -1.1
FAM49B-212ENST00000519110 ERCC6L2Q5T890 1561 aa8.14□□□□□ -1.11
FAM49B-212ENST00000519110 SP7Q8TDD2 431 aaPredicted RBP8.14□□□□□ -1.11
FAM49B-212ENST00000519110 CHRDL2Q6WN34 429 aa8.12□□□□□ -1.11
FAM49B-212ENST00000519110 CC2D2AQ9P2K1 1620 aa8.12□□□□□ -1.11
FAM49B-212ENST00000519110 SHROOM4Q9ULL8 1493 aa8.11□□□□□ -1.11
FAM49B-212ENST00000519110 BICRAQ9NZM4 1560 aa8.11□□□□□ -1.11
FAM49B-212ENST00000519110 PLSCR2Q9NRY7 297 aa8.1□□□□□ -1.11
FAM49B-212ENST00000519110 ABCB7O75027 752 aa8.09□□□□□ -1.11
FAM49B-212ENST00000519110 RBM42Q9BTD8 480 aaKnown RBP8.08□□□□□ -1.12
FAM49B-212ENST00000519110 ZNF219Q9P2Y4 722 aaPredicted RBP8.04□□□□□ -1.12
FAM49B-212ENST00000519110 APLP2Q06481 763 aa8.02□□□□□ -1.13
FAM49B-212ENST00000519110 NPM3O75607 178 aaKnown RBP8.01□□□□□ -1.13
FAM49B-212ENST00000519110 SPATA31D1Q6ZQQ2 1576 aa8.01□□□□□ -1.13
FAM49B-212ENST00000519110 RIMBP3CA6NJZ7 1639 aa8□□□□□ -1.13
FAM49B-212ENST00000519110 RIMBP3BA6NNM3 1639 aa8□□□□□ -1.13
FAM49B-212ENST00000519110 RIMBP3Q9UFD9 1639 aa8□□□□□ -1.13
FAM49B-212ENST00000519110 IFFO2Q5TF58 517 aa7.98□□□□□ -1.13
FAM49B-212ENST00000519110 KDM4FA0A1W2PPD8 638 aa7.93□□□□□ -1.14
FAM49B-212ENST00000519110 ERCC6Q03468 1493 aa7.91□□□□□ -1.14
FAM49B-212ENST00000519110 HECW2Q9P2P5 1572 aa7.9□□□□□ -1.14
FAM49B-212ENST00000519110 EIF4G1Q04637 1599 aaKnown RBP7.87□□□□□ -1.15
FAM49B-212ENST00000519110 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.86□□□□□ -1.15
FAM49B-212ENST00000519110 HNRNPUL2Q1KMD3 747 aaKnown RBP7.86□□□□□ -1.15
FAM49B-212ENST00000519110 BAZ1AQ9NRL2 1556 aaPredicted RBP7.86□□□□□ -1.15
FAM49B-212ENST00000519110 SMARCA4P51532 1647 aa7.85□□□□□ -1.15
FAM49B-212ENST00000519110 HAX1O00165 279 aa7.84□□□□□ -1.15
FAM49B-212ENST00000519110 MROH2BQ7Z745 1585 aa7.83□□□□□ -1.16
FAM49B-212ENST00000519110 OSCARQ8IYS5 282 aa7.83□□□□□ -1.16
FAM49B-212ENST00000519110 PIP4P2Q8N4L2 257 aa7.8□□□□□ -1.16
FAM49B-212ENST00000519110 RSF1Q96T23 1441 aaPredicted RBP7.79□□□□□ -1.16
FAM49B-212ENST00000519110 SLC4A2P04920 1241 aa7.79□□□□□ -1.16
FAM49B-212ENST00000519110 CYB5RLQ6IPT4 315 aa7.78□□□□□ -1.16
FAM49B-212ENST00000519110 SAMD1Q6SPF0 538 aaPredicted RBP7.78□□□□□ -1.16
FAM49B-212ENST00000519110 PEG3Q9GZU2 1588 aa7.77□□□□□ -1.16
FAM49B-212ENST00000519110 ARHGEF11O15085 1522 aa7.77□□□□□ -1.17
FAM49B-212ENST00000519110 WIZO95785 1651 aa7.77□□□□□ -1.17
FAM49B-212ENST00000519110 SYNJ2O15056 1496 aa7.76□□□□□ -1.17
FAM49B-212ENST00000519110 ATAD2BQ9ULI0 1458 aa7.76□□□□□ -1.17
FAM49B-212ENST00000519110 SMARCA2P51531 1590 aa7.76□□□□□ -1.17
FAM49B-212ENST00000519110 AKT1S1Q96B36 256 aa7.76□□□□□ -1.17
FAM49B-212ENST00000519110 NCAPD3P42695 1498 aa7.73□□□□□ -1.17
FAM49B-212ENST00000519110 POLA2Q14181 598 aa7.72□□□□□ -1.17
FAM49B-212ENST00000519110 HMGXB3Q12766 1538 aa7.71□□□□□ -1.17
FAM49B-212ENST00000519110 SUPT5HO00267 1087 aaKnown RBP7.71□□□□□ -1.18
FAM49B-212ENST00000519110 BAZ1BQ9UIG0 1483 aaKnown RBP7.7□□□□□ -1.18
FAM49B-212ENST00000519110 REM2Q8IYK8 340 aaPredicted RBP7.68□□□□□ -1.18
FAM49B-212ENST00000519110 TOP2AP11388 1531 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms