RNA–Protein interactions for RNA: ENST00000517211.2

RN7SKP40-201, Transcript of RNA, 7SK small nuclear pseudogene 40, humanhuman

BASIC

Gene RN7SKP40, Length 242 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP40-201ENST00000517211 AEBP2Q6ZN18 517 aaPredicted RBP23.12■■□□□ 1.29
RN7SKP40-201ENST00000517211 CHIC1Q5VXU3 224 aa21.28■■□□□ 1
RN7SKP40-201ENST00000517211 SENP3Q9H4L4 574 aaPredicted RBP19.55■□□□□ 0.72
RN7SKP40-201ENST00000517211 PHF23Q9BUL5 403 aaPredicted RBP19.35■□□□□ 0.69
RN7SKP40-201ENST00000517211 FOXD1Q16676 465 aa18.53■□□□□ 0.56
RN7SKP40-201ENST00000517211 POTEDQ86YR6 584 aa18.53■□□□□ 0.56
RN7SKP40-201ENST00000517211 MSH5O43196 834 aa17.39■□□□□ 0.37
RN7SKP40-201ENST00000517211 PIAS4Q8N2W9 510 aaPredicted RBP17.04■□□□□ 0.32
RN7SKP40-201ENST00000517211 PPP6R1Q9UPN7 881 aa16.84■□□□□ 0.29
RN7SKP40-201ENST00000517211 ADRA2BP18089 450 aa16.71■□□□□ 0.27
RN7SKP40-201ENST00000517211 PLPPR3Q6T4P5 718 aa16.33■□□□□ 0.2
RN7SKP40-201ENST00000517211 MAPK8IP2Q13387 824 aaPredicted RBP15.65■□□□□ 0.1
RN7SKP40-201ENST00000517211 CACNB1Q02641 598 aaPredicted RBP15.53■□□□□ 0.08
RN7SKP40-201ENST00000517211 DMRT2Q9Y5R5 561 aa15.44■□□□□ 0.06
RN7SKP40-201ENST00000517211 DCAF8L1A6NGE4 600 aa14.96□□□□□ -0.01
RN7SKP40-201ENST00000517211 SCAF1Q9H7N4 1312 aaKnown RBP14.93□□□□□ -0.02
RN7SKP40-201ENST00000517211 RNF39Q9H2S5 420 aa14.89□□□□□ -0.03
RN7SKP40-201ENST00000517211 HOXD11P31277 338 aaPredicted RBP14.56□□□□□ -0.08
RN7SKP40-201ENST00000517211 C1QBPQ07021 282 aaKnown RBP14.51□□□□□ -0.09
RN7SKP40-201ENST00000517211 PPP4R3CPQ6ZMV5 832 aa14.33□□□□□ -0.12
RN7SKP40-201ENST00000517211 POTEHQ6S545 545 aa14.32□□□□□ -0.12
RN7SKP40-201ENST00000517211 RNF216Q9NWF9 866 aaPredicted RBP14.2□□□□□ -0.14
RN7SKP40-201ENST00000517211 CNKSR2Q8WXI2 1034 aa14.13□□□□□ -0.15
RN7SKP40-201ENST00000517211 DNAJC5BQ9UF47 199 aa13.99□□□□□ -0.17
RN7SKP40-201ENST00000517211 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.89□□□□□ -0.19
RN7SKP40-201ENST00000517211 DSG3P32926 999 aa13.73□□□□□ -0.21
RN7SKP40-201ENST00000517211 SPINK5Q9NQ38 1064 aaPredicted RBP13.72□□□□□ -0.21
RN7SKP40-201ENST00000517211 CAPN15O75808 1086 aa13.61□□□□□ -0.23
RN7SKP40-201ENST00000517211 U3KPZ7 1027 aaPredicted RBP13.59□□□□□ -0.23
RN7SKP40-201ENST00000517211 NPM3O75607 178 aaKnown RBP13.38□□□□□ -0.27
RN7SKP40-201ENST00000517211 NCBP3Q53F19 620 aaKnown RBP13.35□□□□□ -0.27
RN7SKP40-201ENST00000517211 ABCB7O75027 752 aa13.34□□□□□ -0.27
RN7SKP40-201ENST00000517211 TRHP20396 242 aaPredicted RBP13.25□□□□□ -0.29
RN7SKP40-201ENST00000517211 CHRDL2Q6WN34 429 aa13.1□□□□□ -0.31
RN7SKP40-201ENST00000517211 SLC4A2P04920 1241 aa13.05□□□□□ -0.32
RN7SKP40-201ENST00000517211 SP7Q8TDD2 431 aaPredicted RBP13.02□□□□□ -0.33
RN7SKP40-201ENST00000517211 ZNF219Q9P2Y4 722 aaPredicted RBP12.98□□□□□ -0.33
RN7SKP40-201ENST00000517211 RBM42Q9BTD8 480 aaKnown RBP12.89□□□□□ -0.35
RN7SKP40-201ENST00000517211 APLP2Q06481 763 aa12.76□□□□□ -0.37
RN7SKP40-201ENST00000517211 POLA2Q14181 598 aa12.7□□□□□ -0.38
RN7SKP40-201ENST00000517211 PIP4P2Q8N4L2 257 aa12.67□□□□□ -0.38
RN7SKP40-201ENST00000517211 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.63□□□□□ -0.39
RN7SKP40-201ENST00000517211 HAX1O00165 279 aa12.63□□□□□ -0.39
RN7SKP40-201ENST00000517211 HNRNPUL2Q1KMD3 747 aaKnown RBP12.63□□□□□ -0.39
RN7SKP40-201ENST00000517211 EVX2Q03828 476 aa12.62□□□□□ -0.39
RN7SKP40-201ENST00000517211 SAMD1Q6SPF0 538 aaPredicted RBP12.61□□□□□ -0.39
RN7SKP40-201ENST00000517211 REM2Q8IYK8 340 aaPredicted RBP12.52□□□□□ -0.41
RN7SKP40-201ENST00000517211 AKT1S1Q96B36 256 aa12.51□□□□□ -0.41
RN7SKP40-201ENST00000517211 KCNA4P22459 653 aa12.5□□□□□ -0.41
RN7SKP40-201ENST00000517211 PITPNM1O00562 1244 aa12.42□□□□□ -0.42
RN7SKP40-201ENST00000517211 FXR2P51116 673 aaKnown RBP eCLIP12.41□□□□□ -0.42
RN7SKP40-201ENST00000517211 OSCARQ8IYS5 282 aa12.35□□□□□ -0.43
RN7SKP40-201ENST00000517211 ATF5Q9Y2D1 282 aaPredicted RBP12.33□□□□□ -0.44
RN7SKP40-201ENST00000517211 MYCNP04198 464 aaPredicted RBP12.24□□□□□ -0.45
RN7SKP40-201ENST00000517211 LHX8Q68G74 356 aa12.23□□□□□ -0.45
RN7SKP40-201ENST00000517211 PLSCR2Q9NRY7 297 aa12.18□□□□□ -0.46
RN7SKP40-201ENST00000517211 GABBR2O75899 941 aa12.12□□□□□ -0.47
RN7SKP40-201ENST00000517211 ZBTB12Q9Y330 459 aaPredicted RBP12.09□□□□□ -0.47
RN7SKP40-201ENST00000517211 PRKAR2AP13861 404 aaKnown RBP12.07□□□□□ -0.48
RN7SKP40-201ENST00000517211 C19orf67A6NJJ6 358 aa12.05□□□□□ -0.48
RN7SKP40-201ENST00000517211 POTEIP0CG38 1075 aa11.96□□□□□ -0.49
RN7SKP40-201ENST00000517211 CLEC11AQ9Y240 323 aa11.94□□□□□ -0.5
RN7SKP40-201ENST00000517211 CHADLQ6NUI6 762 aa11.9□□□□□ -0.5
RN7SKP40-201ENST00000517211 SPDYE2BA6NHP3 402 aa11.76□□□□□ -0.53
RN7SKP40-201ENST00000517211 SPDYE6P0CI01 402 aa11.76□□□□□ -0.53
RN7SKP40-201ENST00000517211 SPDYE2Q495Y8 402 aa11.76□□□□□ -0.53
RN7SKP40-201ENST00000517211 SPDYE1Q8NFV5 336 aaPredicted RBP11.76□□□□□ -0.53
RN7SKP40-201ENST00000517211 FOXD4L1Q9NU39 408 aa11.75□□□□□ -0.53
RN7SKP40-201ENST00000517211 MKRN4PQ13434 485 aaPredicted RBP11.65□□□□□ -0.54
RN7SKP40-201ENST00000517211 CD44P16070 742 aaKnown RBP11.62□□□□□ -0.55
RN7SKP40-201ENST00000517211 OTUD5Q96G74 571 aa11.61□□□□□ -0.55
RN7SKP40-201ENST00000517211 ZNF692Q9BU19 519 aaPredicted RBP11.6□□□□□ -0.55
RN7SKP40-201ENST00000517211 SSUH2Q9Y2M2 353 aa11.6□□□□□ -0.55
RN7SKP40-201ENST00000517211 POTEB2H3BUK9 544 aa11.58□□□□□ -0.56
RN7SKP40-201ENST00000517211 POTEMA6NI47 508 aa11.57□□□□□ -0.56
RN7SKP40-201ENST00000517211 ZBTB22O15209 634 aa11.56□□□□□ -0.56
RN7SKP40-201ENST00000517211 FBLN2P98095 1184 aa11.56□□□□□ -0.56
RN7SKP40-201ENST00000517211 PRR29P0C7W0 189 aa11.54□□□□□ -0.56
RN7SKP40-201ENST00000517211 DCBLD2Q96PD2 775 aa11.53□□□□□ -0.56
RN7SKP40-201ENST00000517211 SLC4A1APQ9BWU0 796 aaKnown RBP11.53□□□□□ -0.56
RN7SKP40-201ENST00000517211 POTEGQ6S5H5 508 aa11.52□□□□□ -0.57
RN7SKP40-201ENST00000517211 FARP1Q9Y4F1 1045 aaPredicted RBP11.49□□□□□ -0.57
RN7SKP40-201ENST00000517211 PABPN1Q86U42 306 aaKnown RBP eCLIP11.45□□□□□ -0.58
RN7SKP40-201ENST00000517211 GALR2O43603 387 aaPredicted RBP11.42□□□□□ -0.58
RN7SKP40-201ENST00000517211 ZRANB1Q9UGI0 708 aa11.36□□□□□ -0.59
RN7SKP40-201ENST00000517211 ZNF579Q8NAF0 562 aaKnown RBP11.34□□□□□ -0.59
RN7SKP40-201ENST00000517211 ATXN8OSP0DMR3 200 aa11.33□□□□□ -0.6
RN7SKP40-201ENST00000517211 PELP1Q8IZL8 1130 aaKnown RBP11.33□□□□□ -0.6
RN7SKP40-201ENST00000517211 POTEJP0CG39 1038 aa11.3□□□□□ -0.6
RN7SKP40-201ENST00000517211 CLCN6P51797 869 aa11.3□□□□□ -0.6
RN7SKP40-201ENST00000517211 LCE2DQ5TA82 110 aaPredicted RBP11.3□□□□□ -0.6
RN7SKP40-201ENST00000517211 PHF12Q96QT6 1004 aa11.22□□□□□ -0.61
RN7SKP40-201ENST00000517211 FAM163AQ96GL9 167 aaPredicted RBP11.17□□□□□ -0.62
RN7SKP40-201ENST00000517211 CREBZFQ9NS37 354 aa11.17□□□□□ -0.62
RN7SKP40-201ENST00000517211 PCDH10Q9P2E7 1040 aa11.17□□□□□ -0.62
RN7SKP40-201ENST00000517211 METRNQ9UJH8 293 aa11.1□□□□□ -0.63
RN7SKP40-201ENST00000517211 ATMINO43313 823 aaPredicted RBP11.01□□□□□ -0.65
RN7SKP40-201ENST00000517211 ASTLQ6HA08 431 aaPredicted RBP11□□□□□ -0.65
RN7SKP40-201ENST00000517211 MS4A3Q96HJ5 214 aa11□□□□□ -0.65
RN7SKP40-201ENST00000517211 POTEFA5A3E0 1075 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms